RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 IGLV3-1P01715 115 aa10.24□□□□□ -0.77
LRRK1-202ENST00000525284 INSL3P51460 131 aa10.23□□□□□ -0.77
LRRK1-202ENST00000525284 A0A1B0GXF2 115 aa10.23□□□□□ -0.77
LRRK1-202ENST00000525284 HILS1P60008 231 aa10.23□□□□□ -0.77
LRRK1-202ENST00000525284 IGHV6-1A0A0B4J1U7 121 aa10.23□□□□□ -0.77
LRRK1-202ENST00000525284 TRBV7-7A0A0K0K1E9 115 aa10.23□□□□□ -0.77
LRRK1-202ENST00000525284 A0A087WVE0 104 aa10.22□□□□□ -0.77
LRRK1-202ENST00000525284 LST1O00453 97 aa10.22□□□□□ -0.77
LRRK1-202ENST00000525284 TRBV6-8A0A0A6YYG3 113 aa10.22□□□□□ -0.77
LRRK1-202ENST00000525284 LOC100131303A0A0U1RQF7 123 aa10.22□□□□□ -0.77
LRRK1-202ENST00000525284 PLXNA4Q9HCM2 1894 aa10.22□□□□□ -0.77
LRRK1-202ENST00000525284 PROK1P58294 105 aa10.21□□□□□ -0.77
LRRK1-202ENST00000525284 C10orf25Q5T742 122 aa10.21□□□□□ -0.77
LRRK1-202ENST00000525284 ZNF73O43830 326 aaPredicted RBP10.21□□□□□ -0.77
LRRK1-202ENST00000525284 PYGO1Q9Y3Y4 419 aa10.21□□□□□ -0.78
LRRK1-202ENST00000525284 TICRRQ7Z2Z1 1910 aa10.21□□□□□ -0.78
LRRK1-202ENST00000525284 LINC01547P58512 204 aaPredicted RBP10.2□□□□□ -0.78
LRRK1-202ENST00000525284 CIRBP-AS1Q8TBR5 109 aa10.2□□□□□ -0.78
LRRK1-202ENST00000525284 IGF1P05019 195 aa10.19□□□□□ -0.78
LRRK1-202ENST00000525284 PLXNB3Q9ULL4 1909 aa10.19□□□□□ -0.78
LRRK1-202ENST00000525284 PLA2G5P39877 138 aa10.17□□□□□ -0.78
LRRK1-202ENST00000525284 Q8N7P7 452 aa10.17□□□□□ -0.78
LRRK1-202ENST00000525284 DENND4CQ5VZ89 1909 aa10.17□□□□□ -0.78
LRRK1-202ENST00000525284 TMEM89A2RUT3 159 aa10.16□□□□□ -0.78
LRRK1-202ENST00000525284 LOC107984640A0A0U1RRK4 108 aa10.16□□□□□ -0.78
LRRK1-202ENST00000525284 NTM-AS1Q6ZSK4 140 aa10.16□□□□□ -0.78
LRRK1-202ENST00000525284 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.16□□□□□ -0.78
LRRK1-202ENST00000525284 IGLV4-69A0A075B6H9 119 aa10.16□□□□□ -0.78
LRRK1-202ENST00000525284 CRIP2P52943 208 aaPredicted RBP10.16□□□□□ -0.78
LRRK1-202ENST00000525284 IGLV2-8P01709 118 aa10.16□□□□□ -0.78
LRRK1-202ENST00000525284 LINC00482Q8N8I6 264 aa10.16□□□□□ -0.78
LRRK1-202ENST00000525284 CCDC140Q96MF4 163 aa10.16□□□□□ -0.78
LRRK1-202ENST00000525284 BBC3Q96PG8 261 aaPredicted RBP10.15□□□□□ -0.78
LRRK1-202ENST00000525284 NCKAP5O14513 1909 aa10.15□□□□□ -0.78
LRRK1-202ENST00000525284 M0QY20 66 aa10.15□□□□□ -0.78
LRRK1-202ENST00000525284 ODF3L1Q8IXM7 274 aa10.14□□□□□ -0.79
LRRK1-202ENST00000525284 KIAA1671Q9BY89 1806 aa10.14□□□□□ -0.79
LRRK1-202ENST00000525284 H0Y9P7 68 aa10.14□□□□□ -0.79
LRRK1-202ENST00000525284 TNFRSF13BO14836 293 aaPredicted RBP10.14□□□□□ -0.79
LRRK1-202ENST00000525284 SPINT4Q6UDR6 99 aa10.14□□□□□ -0.79
LRRK1-202ENST00000525284 RNASE3P12724 160 aaKnown RBP10.14□□□□□ -0.79
LRRK1-202ENST00000525284 SPAG11AQ6PDA7 123 aa10.14□□□□□ -0.79
LRRK1-202ENST00000525284 CD164L2Q6UWJ8 174 aa10.14□□□□□ -0.79
LRRK1-202ENST00000525284 Q6ZS46 218 aa10.14□□□□□ -0.79
LRRK1-202ENST00000525284 MBD6Q96DN6 1003 aa10.13□□□□□ -0.79
LRRK1-202ENST00000525284 NOTCH4Q99466 2003 aa10.13□□□□□ -0.79
LRRK1-202ENST00000525284 C1orf137Q5JT78 98 aa10.13□□□□□ -0.79
LRRK1-202ENST00000525284 SHANK1Q9Y566 2161 aa10.13□□□□□ -0.79
LRRK1-202ENST00000525284 PRLHP81277 87 aa10.13□□□□□ -0.79
LRRK1-202ENST00000525284 NRACQ8N912 160 aa10.12□□□□□ -0.79
LRRK1-202ENST00000525284 ODF3Q96PU9 254 aa10.12□□□□□ -0.79
LRRK1-202ENST00000525284 DEFB116Q30KQ4 102 aa10.12□□□□□ -0.79
LRRK1-202ENST00000525284 LINC01548A6NM66 108 aa10.12□□□□□ -0.79
LRRK1-202ENST00000525284 IGLV2-14P01704 120 aa10.12□□□□□ -0.79
LRRK1-202ENST00000525284 Q8N3U1 123 aa10.11□□□□□ -0.79
LRRK1-202ENST00000525284 Q9UF83 564 aa10.11□□□□□ -0.79
LRRK1-202ENST00000525284 TANC1Q9C0D5 1861 aa10.11□□□□□ -0.79
LRRK1-202ENST00000525284 CREBBPQ92793 2442 aa10.11□□□□□ -0.79
LRRK1-202ENST00000525284 TRBV6-4A0A1B0GX49 114 aa10.11□□□□□ -0.79
LRRK1-202ENST00000525284 ZNF843Q8N446 348 aa10.11□□□□□ -0.79
LRRK1-202ENST00000525284 LINC00959A0A1B0GUT2 108 aa10.11□□□□□ -0.79
LRRK1-202ENST00000525284 IGLV1-47P01700 117 aa10.11□□□□□ -0.79
LRRK1-202ENST00000525284 ARHGAP21Q5T5U3 1957 aa10.1□□□□□ -0.79
LRRK1-202ENST00000525284 MALRD1Q5VYJ5 2156 aa10.1□□□□□ -0.79
LRRK1-202ENST00000525284 RNF185Q96GF1 192 aa10.1□□□□□ -0.79
LRRK1-202ENST00000525284 C2orf91Q6ZV80 131 aa10.1□□□□□ -0.79
LRRK1-202ENST00000525284 U3KQA8 63 aa10.1□□□□□ -0.79
LRRK1-202ENST00000525284 GOLGB1Q14789 3259 aaKnown RBP10.09□□□□□ -0.79
LRRK1-202ENST00000525284 KIF26AQ9ULI4 1882 aaPredicted RBP10.09□□□□□ -0.79
LRRK1-202ENST00000525284 DEFB114Q30KQ6 69 aa10.09□□□□□ -0.79
LRRK1-202ENST00000525284 EP400Q96L91 3159 aa10.09□□□□□ -0.79
LRRK1-202ENST00000525284 SBSPONQ8IVN8 264 aa10.09□□□□□ -0.79
LRRK1-202ENST00000525284 CNOT1A5YKK6 2376 aaKnown RBP10.08□□□□□ -0.8
LRRK1-202ENST00000525284 K7EQG2 157 aa10.08□□□□□ -0.8
LRRK1-202ENST00000525284 TSHBP01222 138 aa10.08□□□□□ -0.8
LRRK1-202ENST00000525284 INAFM1C9JVW0 142 aa10.08□□□□□ -0.8
LRRK1-202ENST00000525284 DAZAP2Q15038 168 aaPredicted RBP10.08□□□□□ -0.8
LRRK1-202ENST00000525284 TRAV10A0A0B4J240 114 aa10.07□□□□□ -0.8
LRRK1-202ENST00000525284 ACACAQ13085 2346 aa10.07□□□□□ -0.8
LRRK1-202ENST00000525284 COX17Q14061 63 aa10.07□□□□□ -0.8
LRRK1-202ENST00000525284 WNK1Q9H4A3 2382 aa10.07□□□□□ -0.8
LRRK1-202ENST00000525284 KPRPQ5T749 579 aaPredicted RBP10.07□□□□□ -0.8
LRRK1-202ENST00000525284 Q8N814 137 aa10.06□□□□□ -0.8
LRRK1-202ENST00000525284 A0A1B0GU69 56 aa10.06□□□□□ -0.8
LRRK1-202ENST00000525284 CRIP1P50238 77 aa10.06□□□□□ -0.8
LRRK1-202ENST00000525284 LINC00575Q6W349 94 aa10.06□□□□□ -0.8
LRRK1-202ENST00000525284 U3KQK5 164 aa10.06□□□□□ -0.8
LRRK1-202ENST00000525284 IGLV2-11P01706 119 aa10.05□□□□□ -0.8
LRRK1-202ENST00000525284 RPL28P46779 137 aaKnown RBP10.05□□□□□ -0.8
LRRK1-202ENST00000525284 A0A087WYN8 130 aa10.05□□□□□ -0.8
LRRK1-202ENST00000525284 CYSRT1A8MQ03 144 aa10.05□□□□□ -0.8
LRRK1-202ENST00000525284 LINC00474Q9P2X8 69 aa10.05□□□□□ -0.8
LRRK1-202ENST00000525284 PRO0628Q9UI54 55 aa10.05□□□□□ -0.8
LRRK1-202ENST00000525284 MED13Q9UHV7 2174 aa10.05□□□□□ -0.8
LRRK1-202ENST00000525284 HCG22E2RYF7 251 aa10.04□□□□□ -0.8
LRRK1-202ENST00000525284 TMEM254Q8TBM7 123 aa10.04□□□□□ -0.8
LRRK1-202ENST00000525284 REG3GQ6UW15 175 aa10.04□□□□□ -0.8
LRRK1-202ENST00000525284 Q6ZSR3 168 aa10.04□□□□□ -0.8
LRRK1-202ENST00000525284 ADORA2A-AS1P86434 159 aa10.03□□□□□ -0.8
LRRK1-202ENST00000525284 KRTAP27-1Q3LI81 207 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms