RNA–Protein interactions for RNA: ENST00000524843.5

CASP4-204, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 978 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-204ENST00000524843 MAPKAPK5-AS1Q8N8E1 139 aa5.31□□□□□ -1.56
CASP4-204ENST00000524843 OR5A1Q8NGJ0 315 aa5.31□□□□□ -1.56
CASP4-204ENST00000524843 PHLDA1Q8WV24 401 aaPredicted RBP5.31□□□□□ -1.56
CASP4-204ENST00000524843 TTTY13Q9BZ97 58 aa5.31□□□□□ -1.56
CASP4-204ENST00000524843 GEMIN7Q9H840 131 aaKnown RBP5.31□□□□□ -1.56
CASP4-204ENST00000524843 NSD1Q96L73 2696 aaPredicted RBP5.3□□□□□ -1.56
CASP4-204ENST00000524843 NOTCH2Q04721 2471 aa5.3□□□□□ -1.56
CASP4-204ENST00000524843 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.3□□□□□ -1.56
CASP4-204ENST00000524843 A0A0J9YXV3 536 aa5.3□□□□□ -1.56
CASP4-204ENST00000524843 IGKV2-29A2NJV5 120 aaPredicted RBP5.3□□□□□ -1.56
CASP4-204ENST00000524843 GAGE12JA6NER3 117 aa5.3□□□□□ -1.56
CASP4-204ENST00000524843 TMEM238C9JI98 176 aa5.3□□□□□ -1.56
CASP4-204ENST00000524843 UBE2L6O14933 153 aa5.3□□□□□ -1.56
CASP4-204ENST00000524843 MIFP14174 115 aa5.3□□□□□ -1.56
CASP4-204ENST00000524843 UBE2D1P51668 147 aa5.3□□□□□ -1.56
CASP4-204ENST00000524843 FXYD2P54710 66 aa5.3□□□□□ -1.56
CASP4-204ENST00000524843 GAGE4Q13068 117 aa5.3□□□□□ -1.56
CASP4-204ENST00000524843 GAGE5Q13069 117 aa5.3□□□□□ -1.56
CASP4-204ENST00000524843 VAMP3Q15836 100 aa5.3□□□□□ -1.56
CASP4-204ENST00000524843 GAGE13Q4V321 117 aa5.3□□□□□ -1.56
CASP4-204ENST00000524843 TMEM101Q96IK0 257 aa5.3□□□□□ -1.56
CASP4-204ENST00000524843 X6R8D5 127 aa5.3□□□□□ -1.56
CASP4-204ENST00000524843 MAP1AP78559 2803 aaPredicted RBP5.29□□□□□ -1.56
CASP4-204ENST00000524843 GCN1Q92616 2671 aaKnown RBP5.29□□□□□ -1.56
CASP4-204ENST00000524843 IGHV3-38A0A0C4DH36 116 aa5.29□□□□□ -1.56
CASP4-204ENST00000524843 IGHV1-58A0A0C4DH39 117 aa5.29□□□□□ -1.56
CASP4-204ENST00000524843 A0A0J9YY99 117 aa5.29□□□□□ -1.56
CASP4-204ENST00000524843 EMP1P54849 157 aa5.29□□□□□ -1.56
CASP4-204ENST00000524843 FHL2Q14192 279 aa5.29□□□□□ -1.56
CASP4-204ENST00000524843 LYRM7Q5U5X0 104 aa5.29□□□□□ -1.56
CASP4-204ENST00000524843 AMMECR1LQ6DCA0 310 aa5.29□□□□□ -1.56
CASP4-204ENST00000524843 Q6ZVH6 145 aa5.29□□□□□ -1.56
CASP4-204ENST00000524843 FAM104AQ969W3 186 aa5.29□□□□□ -1.56
CASP4-204ENST00000524843 OPRPNQ99935 248 aaPredicted RBP5.29□□□□□ -1.56
CASP4-204ENST00000524843 TIMM17BO60830 172 aa5.28□□□□□ -1.56
CASP4-204ENST00000524843 FABP2P12104 132 aa5.28□□□□□ -1.56
CASP4-204ENST00000524843 TSPEAR-AS2P59090 65 aa5.28□□□□□ -1.56
CASP4-204ENST00000524843 SRSF9Q13242 221 aaKnown RBP eCLIP5.28□□□□□ -1.56
CASP4-204ENST00000524843 NHP2Q9NX24 153 aaKnown RBP5.28□□□□□ -1.56
CASP4-204ENST00000524843 PRO0255Q9UI72 69 aa5.28□□□□□ -1.56
CASP4-204ENST00000524843 SETXQ7Z333 2677 aaKnown RBP5.28□□□□□ -1.56
CASP4-204ENST00000524843 TRAV26-1A0A087WT03 109 aa5.27□□□□□ -1.57
CASP4-204ENST00000524843 TRBV6-8A0A0A6YYG3 113 aa5.27□□□□□ -1.57
CASP4-204ENST00000524843 A0A1W2PPM0 123 aa5.27□□□□□ -1.57
CASP4-204ENST00000524843 A8MZ25 164 aa5.27□□□□□ -1.57
CASP4-204ENST00000524843 K7EP34 96 aa5.27□□□□□ -1.57
CASP4-204ENST00000524843 IGHV3-30-3P0DP02 117 aa5.27□□□□□ -1.57
CASP4-204ENST00000524843 RPL24P83731 157 aaKnown RBP5.27□□□□□ -1.57
CASP4-204ENST00000524843 ZFAND6Q6FIF0 208 aa5.27□□□□□ -1.57
CASP4-204ENST00000524843 NTM-AS1Q6ZSK4 140 aa5.27□□□□□ -1.57
CASP4-204ENST00000524843 SH2D6Q7Z4S9 175 aa5.27□□□□□ -1.57
CASP4-204ENST00000524843 DEFB104AQ8WTQ1 72 aa5.27□□□□□ -1.57
CASP4-204ENST00000524843 COPS9Q8WXC6 57 aa5.27□□□□□ -1.57
CASP4-204ENST00000524843 VSIG2Q96IQ7 327 aa5.27□□□□□ -1.57
CASP4-204ENST00000524843 KRTAP4-8Q9BYQ9 185 aa5.27□□□□□ -1.57
CASP4-204ENST00000524843 Q9UF83 564 aa5.27□□□□□ -1.57
CASP4-204ENST00000524843 IGLV5-39A0A0G2JS06 123 aa5.26□□□□□ -1.57
CASP4-204ENST00000524843 A0A0J9YXY3 114 aa5.26□□□□□ -1.57
CASP4-204ENST00000524843 GAGE10A6NGK3 116 aa5.26□□□□□ -1.57
CASP4-204ENST00000524843 H3BUT2 72 aa5.26□□□□□ -1.57
CASP4-204ENST00000524843 DEFB135Q30KP9 77 aa5.26□□□□□ -1.57
CASP4-204ENST00000524843 C12orf74Q32Q52 190 aa5.26□□□□□ -1.57
CASP4-204ENST00000524843 CEMP1Q6PRD7 247 aaPredicted RBP5.26□□□□□ -1.57
CASP4-204ENST00000524843 SFTA2Q6UW10 78 aa5.26□□□□□ -1.57
CASP4-204ENST00000524843 RNF183Q96D59 192 aa5.26□□□□□ -1.57
CASP4-204ENST00000524843 SPANXDQ9BXN6 97 aa5.26□□□□□ -1.57
CASP4-204ENST00000524843 PPDPFQ9H3Y8 114 aa5.26□□□□□ -1.57
CASP4-204ENST00000524843 CDC42SE2Q9NRR3 84 aa5.26□□□□□ -1.57
CASP4-204ENST00000524843 SPANXCQ9NY87 97 aa5.26□□□□□ -1.57
CASP4-204ENST00000524843 NDUFA12Q9UI09 145 aa5.26□□□□□ -1.57
CASP4-204ENST00000524843 F8P00451 2351 aa5.26□□□□□ -1.57
CASP4-204ENST00000524843 SETD2Q9BYW2 2564 aaPredicted RBP5.25□□□□□ -1.57
CASP4-204ENST00000524843 JMJD1CQ15652 2540 aa5.25□□□□□ -1.57
CASP4-204ENST00000524843 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.25□□□□□ -1.57
CASP4-204ENST00000524843 A0A0B4J2C4 111 aa5.25□□□□□ -1.57
CASP4-204ENST00000524843 IGHV4-28A0A0C4DH34 117 aa5.25□□□□□ -1.57
CASP4-204ENST00000524843 NDUFA1O15239 70 aa5.25□□□□□ -1.57
CASP4-204ENST00000524843 CCL25O15444 150 aa5.25□□□□□ -1.57
CASP4-204ENST00000524843 IGHV3-30P01768 117 aa5.25□□□□□ -1.57
CASP4-204ENST00000524843 IGHV3-30-5P0DP03 117 aa5.25□□□□□ -1.57
CASP4-204ENST00000524843 DEFB130BP0DP73 79 aa5.25□□□□□ -1.57
CASP4-204ENST00000524843 DEFB130AP0DP74 79 aa5.25□□□□□ -1.57
CASP4-204ENST00000524843 IFITM1P13164 125 aa5.25□□□□□ -1.57
CASP4-204ENST00000524843 DAD1P61803 113 aa5.25□□□□□ -1.57
CASP4-204ENST00000524843 EGFEM1PQ0D2K5 195 aa5.25□□□□□ -1.57
CASP4-204ENST00000524843 FAM222AQ5U5X8 452 aa5.25□□□□□ -1.57
CASP4-204ENST00000524843 Q8NAQ8 132 aa5.25□□□□□ -1.57
CASP4-204ENST00000524843 ATP6V0E2Q8NHE4 81 aa5.25□□□□□ -1.57
CASP4-204ENST00000524843 A0A1B0GUV1 79 aa5.24□□□□□ -1.57
CASP4-204ENST00000524843 PAX4O43316 350 aa5.24□□□□□ -1.57
CASP4-204ENST00000524843 ATP5G1P05496 136 aa5.24□□□□□ -1.57
CASP4-204ENST00000524843 SPART-AS1P0CW21 52 aa5.24□□□□□ -1.57
CASP4-204ENST00000524843 IGHV4-30-4P0DP06 118 aa5.24□□□□□ -1.57
CASP4-204ENST00000524843 GYPEP15421 78 aa5.24□□□□□ -1.57
CASP4-204ENST00000524843 HERV-K104P63124 156 aa5.24□□□□□ -1.57
CASP4-204ENST00000524843 KRTAP24-1Q3LI83 254 aa5.24□□□□□ -1.57
CASP4-204ENST00000524843 RNASE13Q5GAN3 156 aaKnown RBP5.24□□□□□ -1.57
CASP4-204ENST00000524843 LINC00242Q5T6M2 205 aa5.24□□□□□ -1.57
CASP4-204ENST00000524843 LINC01561Q8N1V8 128 aa5.24□□□□□ -1.57
CASP4-204ENST00000524843 C10orf126Q8N4M7 172 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms