RNA–Protein interactions for RNA: ENST00000524317.1

SCUBE2-208, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 2

Gene SCUBE2, Length 2,322 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-208ENST00000524317 HTN1P15515 57 aa8.53□□□□□ -1.04
SCUBE2-208ENST00000524317 ZNF876PQ49A33 203 aa8.53□□□□□ -1.04
SCUBE2-208ENST00000524317 ODF3L2Q3SX64 289 aa8.52□□□□□ -1.05
SCUBE2-208ENST00000524317 J3KT08 172 aa8.52□□□□□ -1.05
SCUBE2-208ENST00000524317 TOMM6Q96B49 74 aa8.52□□□□□ -1.05
SCUBE2-208ENST00000524317 UBE2D1P51668 147 aa8.51□□□□□ -1.05
SCUBE2-208ENST00000524317 SFTA2Q6UW10 78 aa8.51□□□□□ -1.05
SCUBE2-208ENST00000524317 C15orf53Q8NAA6 179 aa8.51□□□□□ -1.05
SCUBE2-208ENST00000524317 MUC4Q99102 2169 aa8.51□□□□□ -1.05
SCUBE2-208ENST00000524317 LY6G6DO95868 133 aa8.51□□□□□ -1.05
SCUBE2-208ENST00000524317 PRM2P04554 102 aa8.51□□□□□ -1.05
SCUBE2-208ENST00000524317 POLR2KP53803 58 aaKnown RBP8.51□□□□□ -1.05
SCUBE2-208ENST00000524317 M0QY20 66 aa8.5□□□□□ -1.05
SCUBE2-208ENST00000524317 SLC25A20O43772 301 aa8.5□□□□□ -1.05
SCUBE2-208ENST00000524317 PROK1P58294 105 aa8.5□□□□□ -1.05
SCUBE2-208ENST00000524317 ZNF56Q15929 161 aa8.5□□□□□ -1.05
SCUBE2-208ENST00000524317 LINC00482Q8N8I6 264 aa8.5□□□□□ -1.05
SCUBE2-208ENST00000524317 OR13C6PQ8NH95 151 aa8.5□□□□□ -1.05
SCUBE2-208ENST00000524317 SORL1Q92673 2214 aa8.5□□□□□ -1.05
SCUBE2-208ENST00000524317 C9JAW5 83 aa8.49□□□□□ -1.05
SCUBE2-208ENST00000524317 PLNP26678 52 aa8.49□□□□□ -1.05
SCUBE2-208ENST00000524317 C2orf66Q6UXQ4 117 aa8.49□□□□□ -1.05
SCUBE2-208ENST00000524317 FAM19A5Q7Z5A7 132 aaPredicted RBP8.49□□□□□ -1.05
SCUBE2-208ENST00000524317 SCGB3A1Q96QR1 104 aa8.49□□□□□ -1.05
SCUBE2-208ENST00000524317 MRPL35Q9NZE8 188 aaKnown RBP8.49□□□□□ -1.05
SCUBE2-208ENST00000524317 NOTCH2Q04721 2471 aa8.49□□□□□ -1.05
SCUBE2-208ENST00000524317 TRAV8-4A0A0B4J246 113 aa8.49□□□□□ -1.05
SCUBE2-208ENST00000524317 TRBV6-5A0A0K0K1A5 114 aa8.49□□□□□ -1.05
SCUBE2-208ENST00000524317 A0A1B0GX51 115 aa8.49□□□□□ -1.05
SCUBE2-208ENST00000524317 SDHAF1A6NFY7 115 aa8.49□□□□□ -1.05
SCUBE2-208ENST00000524317 C3orf56Q8N813 242 aa8.49□□□□□ -1.05
SCUBE2-208ENST00000524317 SPANXCQ9NY87 97 aa8.49□□□□□ -1.05
SCUBE2-208ENST00000524317 LOC107984640A0A0U1RRK4 108 aa8.48□□□□□ -1.05
SCUBE2-208ENST00000524317 LINC01561Q8N1V8 128 aa8.48□□□□□ -1.05
SCUBE2-208ENST00000524317 CHCHD5Q9BSY4 110 aa8.48□□□□□ -1.05
SCUBE2-208ENST00000524317 HIVEP2P31629 2446 aa8.48□□□□□ -1.05
SCUBE2-208ENST00000524317 OTOGQ6ZRI0 2925 aa8.48□□□□□ -1.05
SCUBE2-208ENST00000524317 TRBV27A0A0K0K1C4 114 aa8.48□□□□□ -1.05
SCUBE2-208ENST00000524317 INSP01308 110 aa8.48□□□□□ -1.05
SCUBE2-208ENST00000524317 PRR26Q8N8Z3 221 aa8.48□□□□□ -1.05
SCUBE2-208ENST00000524317 DEFB104AQ8WTQ1 72 aa8.48□□□□□ -1.05
SCUBE2-208ENST00000524317 LINC00467Q9BRT7 94 aa8.48□□□□□ -1.05
SCUBE2-208ENST00000524317 TRAV12-1A0A0B4J245 112 aa8.47□□□□□ -1.05
SCUBE2-208ENST00000524317 NSUN5P1Q3KNT7 163 aa8.47□□□□□ -1.05
SCUBE2-208ENST00000524317 GAGE2AQ6NT46 116 aa8.47□□□□□ -1.05
SCUBE2-208ENST00000524317 TRPT1Q86TN4 253 aaKnown RBP8.47□□□□□ -1.05
SCUBE2-208ENST00000524317 BAALCQ8WXS3 180 aa8.47□□□□□ -1.05
SCUBE2-208ENST00000524317 PRADC1Q9BSG0 188 aa8.47□□□□□ -1.05
SCUBE2-208ENST00000524317 SETD2Q9BYW2 2564 aaPredicted RBP8.47□□□□□ -1.05
SCUBE2-208ENST00000524317 M0R2P5 195 aa8.47□□□□□ -1.05
SCUBE2-208ENST00000524317 C11orf72Q8NBR9 251 aa8.47□□□□□ -1.05
SCUBE2-208ENST00000524317 NEXN-AS1Q8NBZ9 246 aa8.47□□□□□ -1.05
SCUBE2-208ENST00000524317 XCL2Q9UBD3 114 aa8.47□□□□□ -1.05
SCUBE2-208ENST00000524317 SRSF9Q13242 221 aaKnown RBP eCLIP8.46□□□□□ -1.05
SCUBE2-208ENST00000524317 C9orf153Q5TBE3 101 aa8.46□□□□□ -1.05
SCUBE2-208ENST00000524317 NDUFA11Q86Y39 141 aa8.46□□□□□ -1.05
SCUBE2-208ENST00000524317 SPANXDQ9BXN6 97 aa8.46□□□□□ -1.05
SCUBE2-208ENST00000524317 RPS28P62857 69 aaKnown RBP8.46□□□□□ -1.06
SCUBE2-208ENST00000524317 PIK3CD-AS1Q5SR53 167 aa8.46□□□□□ -1.06
SCUBE2-208ENST00000524317 TMEM101Q96IK0 257 aa8.46□□□□□ -1.06
SCUBE2-208ENST00000524317 TP53TG1Q9Y2A0 90 aa8.46□□□□□ -1.06
SCUBE2-208ENST00000524317 WNK1Q9H4A3 2382 aa8.46□□□□□ -1.06
SCUBE2-208ENST00000524317 IGHV3-73A0A0B4J1V6 119 aa8.45□□□□□ -1.06
SCUBE2-208ENST00000524317 F8VRH5 84 aa8.45□□□□□ -1.06
SCUBE2-208ENST00000524317 H7C1H1 209 aa8.45□□□□□ -1.06
SCUBE2-208ENST00000524317 IGLV1-51P01701 117 aa8.45□□□□□ -1.06
SCUBE2-208ENST00000524317 KRTAP10-3P60369 221 aa8.45□□□□□ -1.06
SCUBE2-208ENST00000524317 RPL13AP40429 203 aaKnown RBP8.45□□□□□ -1.06
SCUBE2-208ENST00000524317 EMP1P54849 157 aa8.45□□□□□ -1.06
SCUBE2-208ENST00000524317 C1orf158Q8N1D5 194 aa8.45□□□□□ -1.06
SCUBE2-208ENST00000524317 C10orf126Q8N4M7 172 aa8.45□□□□□ -1.06
SCUBE2-208ENST00000524317 IL17DQ8TAD2 202 aa8.45□□□□□ -1.06
SCUBE2-208ENST00000524317 NTN5Q8WTR8 489 aaPredicted RBP8.45□□□□□ -1.06
SCUBE2-208ENST00000524317 EDA2RQ9HAV5 297 aa8.45□□□□□ -1.06
SCUBE2-208ENST00000524317 IGIPA6NJ69 53 aa8.44□□□□□ -1.06
SCUBE2-208ENST00000524317 INAFM1C9JVW0 142 aa8.44□□□□□ -1.06
SCUBE2-208ENST00000524317 TSHBP01222 138 aa8.44□□□□□ -1.06
SCUBE2-208ENST00000524317 RPL39P62891 51 aaKnown RBP8.44□□□□□ -1.06
SCUBE2-208ENST00000524317 HERVK_113P63121 156 aa8.44□□□□□ -1.06
SCUBE2-208ENST00000524317 SCGB1D4Q6XE38 83 aa8.44□□□□□ -1.06
SCUBE2-208ENST00000524317 C3orf22Q8N5N4 141 aa8.44□□□□□ -1.06
SCUBE2-208ENST00000524317 RETNQ9HD89 108 aa8.44□□□□□ -1.06
SCUBE2-208ENST00000524317 NIPBLQ6KC79 2804 aaeCLIP8.43□□□□□ -1.06
SCUBE2-208ENST00000524317 TRBV7-7A0A0K0K1E9 115 aa8.43□□□□□ -1.06
SCUBE2-208ENST00000524317 IGHV3OR16-12A0A075B7B8 117 aa8.42□□□□□ -1.06
SCUBE2-208ENST00000524317 UQCRQO14949 82 aa8.42□□□□□ -1.06
SCUBE2-208ENST00000524317 P0DMU3 169 aa8.42□□□□□ -1.06
SCUBE2-208ENST00000524317 FAM231AP0DMU4 169 aa8.42□□□□□ -1.06
SCUBE2-208ENST00000524317 FAM231CP0DMU5 169 aa8.42□□□□□ -1.06
SCUBE2-208ENST00000524317 CMC4P56277 68 aaPredicted RBP8.42□□□□□ -1.06
SCUBE2-208ENST00000524317 LINC01600Q96MT4 127 aa8.42□□□□□ -1.06
SCUBE2-208ENST00000524317 WFDC10AQ9H1F0 79 aa8.42□□□□□ -1.06
SCUBE2-208ENST00000524317 I3L3M4 83 aa8.42□□□□□ -1.06
SCUBE2-208ENST00000524317 RHOHQ15669 191 aa8.42□□□□□ -1.06
SCUBE2-208ENST00000524317 BEAN1Q3B7T3 259 aa8.42□□□□□ -1.06
SCUBE2-208ENST00000524317 TIMM17AQ99595 171 aa8.42□□□□□ -1.06
SCUBE2-208ENST00000524317 V9GYY9 64 aa8.42□□□□□ -1.06
SCUBE2-208ENST00000524317 ZNF815PA8K554 130 aa8.41□□□□□ -1.06
SCUBE2-208ENST00000524317 F5H768 121 aa8.41□□□□□ -1.06
SCUBE2-208ENST00000524317 Q6ZSN1 163 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 263.7 ms