RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 GAGE5Q13069 117 aa4.86□□□□□ -1.63
CSMD1-211ENST00000523062 BATFQ16520 125 aa4.86□□□□□ -1.63
CSMD1-211ENST00000523062 DEFB135Q30KP9 77 aa4.86□□□□□ -1.63
CSMD1-211ENST00000523062 GAGE13Q4V321 117 aa4.86□□□□□ -1.63
CSMD1-211ENST00000523062 TMEM97Q5BJF2 176 aa4.86□□□□□ -1.63
CSMD1-211ENST00000523062 BOD1L2Q8IYS8 172 aa4.86□□□□□ -1.63
CSMD1-211ENST00000523062 SLC25A29Q8N8R3 303 aa4.86□□□□□ -1.63
CSMD1-211ENST00000523062 PRADC1Q9BSG0 188 aa4.86□□□□□ -1.63
CSMD1-211ENST00000523062 TP73-AS1Q9UF72 201 aa4.86□□□□□ -1.63
CSMD1-211ENST00000523062 Q9UF83 564 aa4.86□□□□□ -1.63
CSMD1-211ENST00000523062 IGKV2D-26A0A0A0MRZ7 120 aa4.85□□□□□ -1.63
CSMD1-211ENST00000523062 C11orf86A6NJI1 115 aa4.85□□□□□ -1.63
CSMD1-211ENST00000523062 SIVA1O15304 175 aa4.85□□□□□ -1.63
CSMD1-211ENST00000523062 DEFB130BP0DP73 79 aa4.85□□□□□ -1.63
CSMD1-211ENST00000523062 DEFB130AP0DP74 79 aa4.85□□□□□ -1.63
CSMD1-211ENST00000523062 MIFP14174 115 aa4.85□□□□□ -1.63
CSMD1-211ENST00000523062 EGFEM1PQ0D2K5 195 aa4.85□□□□□ -1.63
CSMD1-211ENST00000523062 COL5A1-AS1Q5SY13 56 aa4.85□□□□□ -1.63
CSMD1-211ENST00000523062 C2orf91Q6ZV80 131 aa4.85□□□□□ -1.63
CSMD1-211ENST00000523062 NFE4Q86UQ8 179 aa4.85□□□□□ -1.63
CSMD1-211ENST00000523062 PCP2Q8IVA1 136 aa4.85□□□□□ -1.63
CSMD1-211ENST00000523062 OR11H2Q8NH07 326 aa4.85□□□□□ -1.63
CSMD1-211ENST00000523062 TIMM21Q9BVV7 248 aa4.85□□□□□ -1.63
CSMD1-211ENST00000523062 VCX2Q9H322 139 aa4.85□□□□□ -1.63
CSMD1-211ENST00000523062 UBE2D4Q9Y2X8 147 aa4.85□□□□□ -1.63
CSMD1-211ENST00000523062 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.84□□□□□ -1.63
CSMD1-211ENST00000523062 IGHV4-28A0A0C4DH34 117 aa4.84□□□□□ -1.63
CSMD1-211ENST00000523062 IGKV2-29A2NJV5 120 aaPredicted RBP4.84□□□□□ -1.63
CSMD1-211ENST00000523062 A8MZ25 164 aa4.84□□□□□ -1.63
CSMD1-211ENST00000523062 E9PLD3 99 aa4.84□□□□□ -1.63
CSMD1-211ENST00000523062 HINT1P49773 126 aaPredicted RBP4.84□□□□□ -1.63
CSMD1-211ENST00000523062 MRPS36P82909 103 aaKnown RBP4.84□□□□□ -1.63
CSMD1-211ENST00000523062 HSD52Q0P140 79 aa4.84□□□□□ -1.63
CSMD1-211ENST00000523062 FAM222AQ5U5X8 452 aa4.84□□□□□ -1.63
CSMD1-211ENST00000523062 RNF183Q96D59 192 aa4.84□□□□□ -1.63
CSMD1-211ENST00000523062 AMELXQ99217 191 aa4.84□□□□□ -1.63
CSMD1-211ENST00000523062 OPRPNQ99935 248 aaPredicted RBP4.84□□□□□ -1.63
CSMD1-211ENST00000523062 CHAC1Q9BUX1 264 aa4.84□□□□□ -1.63
CSMD1-211ENST00000523062 GTSF1LQ9H1H1 148 aa4.84□□□□□ -1.63
CSMD1-211ENST00000523062 LOC100131303A0A0U1RQF7 123 aa4.83□□□□□ -1.64
CSMD1-211ENST00000523062 TEX48A0A1B0GUV7 120 aa4.83□□□□□ -1.64
CSMD1-211ENST00000523062 LINC00694P0DN24 101 aa4.83□□□□□ -1.64
CSMD1-211ENST00000523062 DGAT2L7PQ6IED9 249 aa4.83□□□□□ -1.64
CSMD1-211ENST00000523062 Q6ZUT4 128 aa4.83□□□□□ -1.64
CSMD1-211ENST00000523062 Q8NAQ8 132 aa4.83□□□□□ -1.64
CSMD1-211ENST00000523062 TMEM243Q9BU79 118 aa4.83□□□□□ -1.64
CSMD1-211ENST00000523062 HIGD1BQ9P298 99 aa4.83□□□□□ -1.64
CSMD1-211ENST00000523062 TRBV25-1A0A075B6N4 114 aa4.82□□□□□ -1.64
CSMD1-211ENST00000523062 TRAV8-6A0A0B4J262 113 aa4.82□□□□□ -1.64
CSMD1-211ENST00000523062 MYMXA0A1B0GTQ4 84 aa4.82□□□□□ -1.64
CSMD1-211ENST00000523062 H7C423 109 aa4.82□□□□□ -1.64
CSMD1-211ENST00000523062 KRTAP10-11P60412 298 aa4.82□□□□□ -1.64
CSMD1-211ENST00000523062 DAD1P61803 113 aa4.82□□□□□ -1.64
CSMD1-211ENST00000523062 MPV17L2Q567V2 206 aa4.82□□□□□ -1.64
CSMD1-211ENST00000523062 BVES-AS1Q5T3Y7 98 aa4.82□□□□□ -1.64
CSMD1-211ENST00000523062 TMEM170BQ5T4T1 132 aa4.82□□□□□ -1.64
CSMD1-211ENST00000523062 CEMP1Q6PRD7 247 aaPredicted RBP4.82□□□□□ -1.64
CSMD1-211ENST00000523062 NTM-AS1Q6ZSK4 140 aa4.82□□□□□ -1.64
CSMD1-211ENST00000523062 SBSPONQ8IVN8 264 aa4.82□□□□□ -1.64
CSMD1-211ENST00000523062 FAM104AQ969W3 186 aa4.82□□□□□ -1.64
CSMD1-211ENST00000523062 PRO0255Q9UI72 69 aa4.82□□□□□ -1.64
CSMD1-211ENST00000523062 CSDC2Q9Y534 153 aaKnown RBP4.82□□□□□ -1.64
CSMD1-211ENST00000523062 TENM1Q9UKZ4 2725 aa4.82□□□□□ -1.64
CSMD1-211ENST00000523062 NIPBLQ6KC79 2804 aaeCLIP4.81□□□□□ -1.64
CSMD1-211ENST00000523062 A0A0J9YXV3 536 aa4.81□□□□□ -1.64
CSMD1-211ENST00000523062 A0A1B0GV90 55 aa4.81□□□□□ -1.64
CSMD1-211ENST00000523062 TINCRA0A1B0GVN0 87 aa4.81□□□□□ -1.64
CSMD1-211ENST00000523062 TMEM223A0PJW6 202 aa4.81□□□□□ -1.64
CSMD1-211ENST00000523062 UBE2L6O14933 153 aa4.81□□□□□ -1.64
CSMD1-211ENST00000523062 DEFB4AO15263 64 aa4.81□□□□□ -1.64
CSMD1-211ENST00000523062 SPART-AS1P0CW21 52 aa4.81□□□□□ -1.64
CSMD1-211ENST00000523062 GYPEP15421 78 aa4.81□□□□□ -1.64
CSMD1-211ENST00000523062 ZNF22P17026 224 aaPredicted RBP4.81□□□□□ -1.64
CSMD1-211ENST00000523062 SEC11AP67812 179 aa4.81□□□□□ -1.64
CSMD1-211ENST00000523062 KRTAP21-3Q3LHN1 58 aa4.81□□□□□ -1.64
CSMD1-211ENST00000523062 AMMECR1LQ6DCA0 310 aa4.81□□□□□ -1.64
CSMD1-211ENST00000523062 OR5A1Q8NGJ0 315 aa4.81□□□□□ -1.64
CSMD1-211ENST00000523062 TTTY13Q9BZ97 58 aa4.81□□□□□ -1.64
CSMD1-211ENST00000523062 VWFP04275 2813 aa4.8□□□□□ -1.64
CSMD1-211ENST00000523062 TRBV6-8A0A0A6YYG3 113 aa4.8□□□□□ -1.64
CSMD1-211ENST00000523062 ZNF815PA8K554 130 aa4.8□□□□□ -1.64
CSMD1-211ENST00000523062 LEPROTO15243 131 aa4.8□□□□□ -1.64
CSMD1-211ENST00000523062 ATP5G1P05496 136 aa4.8□□□□□ -1.64
CSMD1-211ENST00000523062 ZNF25P17030 456 aaPredicted RBP4.8□□□□□ -1.64
CSMD1-211ENST00000523062 LGALS3P17931 250 aaKnown RBP4.8□□□□□ -1.64
CSMD1-211ENST00000523062 UBE2D1P51668 147 aa4.8□□□□□ -1.64
CSMD1-211ENST00000523062 TAL2Q16559 108 aa4.8□□□□□ -1.64
CSMD1-211ENST00000523062 RNASE13Q5GAN3 156 aaKnown RBP4.8□□□□□ -1.64
CSMD1-211ENST00000523062 MAPKAPK5-AS1Q8N8E1 139 aa4.8□□□□□ -1.64
CSMD1-211ENST00000523062 ATP6V0E2Q8NHE4 81 aa4.8□□□□□ -1.64
CSMD1-211ENST00000523062 ORAOV1Q8WV07 137 aa4.8□□□□□ -1.64
CSMD1-211ENST00000523062 PLEKHB2Q96CS7 222 aa4.8□□□□□ -1.64
CSMD1-211ENST00000523062 TMEM101Q96IK0 257 aa4.8□□□□□ -1.64
CSMD1-211ENST00000523062 GEMIN7Q9H840 131 aaKnown RBP4.8□□□□□ -1.64
CSMD1-211ENST00000523062 CELA1Q9UNI1 258 aa4.8□□□□□ -1.64
CSMD1-211ENST00000523062 A6NDN8 102 aa4.79□□□□□ -1.64
CSMD1-211ENST00000523062 G3V4G9 280 aa4.79□□□□□ -1.64
CSMD1-211ENST00000523062 H3BRM9 83 aa4.79□□□□□ -1.64
CSMD1-211ENST00000523062 J3QQQ9 107 aa4.79□□□□□ -1.64
CSMD1-211ENST00000523062 TIRAPP58753 221 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms