RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 TMEM243Q9BU79 118 aa3.7□□□□□ -1.82
VPS13B-211ENST00000522802 EPDR1Q9UM22 224 aa3.7□□□□□ -1.82
VPS13B-211ENST00000522802 TRAV1-1A0A0B4J248 108 aa3.69□□□□□ -1.82
VPS13B-211ENST00000522802 XKRY2A2RUG3 117 aa3.69□□□□□ -1.82
VPS13B-211ENST00000522802 NAP1L6A6NFF2 107 aa3.69□□□□□ -1.82
VPS13B-211ENST00000522802 BCL2P10415 239 aa3.69□□□□□ -1.82
VPS13B-211ENST00000522802 RPL13AP40429 203 aaKnown RBP3.69□□□□□ -1.82
VPS13B-211ENST00000522802 LRRC37A5PQ49AS3 106 aa3.69□□□□□ -1.82
VPS13B-211ENST00000522802 C9orf116Q5BN46 136 aaPredicted RBP3.69□□□□□ -1.82
VPS13B-211ENST00000522802 Q6ZVQ6 151 aa3.69□□□□□ -1.82
VPS13B-211ENST00000522802 ZNF471Q9BX82 626 aaPredicted RBP3.69□□□□□ -1.82
VPS13B-211ENST00000522802 KRTAP4-1Q9BYQ7 146 aa3.69□□□□□ -1.82
VPS13B-211ENST00000522802 IGLV4-3A0A075B6K6 122 aa3.68□□□□□ -1.82
VPS13B-211ENST00000522802 A0A1W2PPV4 95 aa3.68□□□□□ -1.82
VPS13B-211ENST00000522802 A4D1N5 150 aa3.68□□□□□ -1.82
VPS13B-211ENST00000522802 GCHFRP30047 84 aa3.68□□□□□ -1.82
VPS13B-211ENST00000522802 DSCR10P59022 87 aa3.68□□□□□ -1.82
VPS13B-211ENST00000522802 FAM162BQ5T6X4 162 aa3.68□□□□□ -1.82
VPS13B-211ENST00000522802 TRIQKQ629K1 86 aa3.68□□□□□ -1.82
VPS13B-211ENST00000522802 SMIM3Q9BZL3 60 aa3.68□□□□□ -1.82
VPS13B-211ENST00000522802 PKIGQ9Y2B9 76 aa3.68□□□□□ -1.82
VPS13B-211ENST00000522802 TRAV6A0A075B6T7 132 aa3.67□□□□□ -1.82
VPS13B-211ENST00000522802 LOC107984640A0A0U1RRK4 108 aa3.67□□□□□ -1.82
VPS13B-211ENST00000522802 FAM168BA1KXE4 195 aa3.67□□□□□ -1.82
VPS13B-211ENST00000522802 RPL12P30050 165 aaKnown RBP3.67□□□□□ -1.82
VPS13B-211ENST00000522802 XCL1P47992 114 aa3.67□□□□□ -1.82
VPS13B-211ENST00000522802 CDC34P49427 236 aaPredicted RBP3.67□□□□□ -1.82
VPS13B-211ENST00000522802 NKX2-5P52952 324 aaPredicted RBP3.67□□□□□ -1.82
VPS13B-211ENST00000522802 SSTP61278 116 aa3.67□□□□□ -1.82
VPS13B-211ENST00000522802 EIF5AP63241 154 aaKnown RBP3.67□□□□□ -1.82
VPS13B-211ENST00000522802 SYCNQ0VAF6 134 aa3.67□□□□□ -1.82
VPS13B-211ENST00000522802 TPRXLQ17RH7 258 aa3.67□□□□□ -1.82
VPS13B-211ENST00000522802 NUDT15Q9NV35 164 aa3.67□□□□□ -1.82
VPS13B-211ENST00000522802 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.66□□□□□ -1.82
VPS13B-211ENST00000522802 M0QY20 66 aa3.66□□□□□ -1.82
VPS13B-211ENST00000522802 PEX7O00628 323 aa3.66□□□□□ -1.82
VPS13B-211ENST00000522802 UBE2L6O14933 153 aa3.66□□□□□ -1.82
VPS13B-211ENST00000522802 SIX6O95475 246 aa3.66□□□□□ -1.82
VPS13B-211ENST00000522802 MGPP08493 103 aa3.66□□□□□ -1.82
VPS13B-211ENST00000522802 STAG3L2P0CL84 134 aa3.66□□□□□ -1.82
VPS13B-211ENST00000522802 STAG3L3P0CL85 134 aa3.66□□□□□ -1.82
VPS13B-211ENST00000522802 MEF2BQ02080 365 aaPredicted RBP3.66□□□□□ -1.82
VPS13B-211ENST00000522802 RPL18AQ02543 176 aaKnown RBP3.66□□□□□ -1.82
VPS13B-211ENST00000522802 SLC7A5P1Q8MH63 180 aa3.66□□□□□ -1.82
VPS13B-211ENST00000522802 RPP21Q9H633 154 aaKnown RBP3.66□□□□□ -1.82
VPS13B-211ENST00000522802 WFDC1Q9HC57 220 aa3.66□□□□□ -1.82
VPS13B-211ENST00000522802 IGHV1-58A0A0C4DH39 117 aa3.65□□□□□ -1.83
VPS13B-211ENST00000522802 APOMO95445 188 aa3.65□□□□□ -1.83
VPS13B-211ENST00000522802 SCGB1C1Q8TD33 95 aa3.65□□□□□ -1.83
VPS13B-211ENST00000522802 PGLYRP4Q96LB8 373 aa3.65□□□□□ -1.83
VPS13B-211ENST00000522802 AP1S3Q96PC3 154 aa3.65□□□□□ -1.83
VPS13B-211ENST00000522802 RPS10P5Q9NQ39 176 aa3.65□□□□□ -1.83
VPS13B-211ENST00000522802 HSPB11Q9Y547 144 aa3.65□□□□□ -1.83
VPS13B-211ENST00000522802 IGLV4-69A0A075B6H9 119 aa3.64□□□□□ -1.83
VPS13B-211ENST00000522802 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.64□□□□□ -1.83
VPS13B-211ENST00000522802 IGKV2-29A2NJV5 120 aaPredicted RBP3.64□□□□□ -1.83
VPS13B-211ENST00000522802 CENPXA8MT69 81 aa3.64□□□□□ -1.83
VPS13B-211ENST00000522802 HSBP1L1C9JCN9 74 aa3.64□□□□□ -1.83
VPS13B-211ENST00000522802 H0Y8G0 127 aa3.64□□□□□ -1.83
VPS13B-211ENST00000522802 CCL25O15444 150 aa3.64□□□□□ -1.83
VPS13B-211ENST00000522802 SNAI2O43623 268 aa3.64□□□□□ -1.83
VPS13B-211ENST00000522802 FGF6P10767 208 aa3.64□□□□□ -1.83
VPS13B-211ENST00000522802 CRYGAP11844 174 aa3.64□□□□□ -1.83
VPS13B-211ENST00000522802 IL7P13232 177 aa3.64□□□□□ -1.83
VPS13B-211ENST00000522802 UBE2G2P60604 165 aa3.64□□□□□ -1.83
VPS13B-211ENST00000522802 SPANXN1Q5VSR9 72 aa3.64□□□□□ -1.83
VPS13B-211ENST00000522802 FAM19A5Q7Z5A7 132 aaPredicted RBP3.64□□□□□ -1.83
VPS13B-211ENST00000522802 NUP35Q8NFH5 326 aa3.64□□□□□ -1.83
VPS13B-211ENST00000522802 CARHSP1Q9Y2V2 147 aaKnown RBP3.64□□□□□ -1.83
VPS13B-211ENST00000522802 A0A1W2PRE2 83 aa3.63□□□□□ -1.83
VPS13B-211ENST00000522802 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
VPS13B-211ENST00000522802 PLA2G10O15496 165 aa3.63□□□□□ -1.83
VPS13B-211ENST00000522802 LTAP01374 205 aa3.63□□□□□ -1.83
VPS13B-211ENST00000522802 SMIM17P0DL12 118 aa3.63□□□□□ -1.83
VPS13B-211ENST00000522802 NDUFV3P56181 108 aaKnown RBP3.63□□□□□ -1.83
VPS13B-211ENST00000522802 COTL1Q14019 142 aa3.63□□□□□ -1.83
VPS13B-211ENST00000522802 AMMECR1LQ6DCA0 310 aa3.63□□□□□ -1.83
VPS13B-211ENST00000522802 MED28Q9H204 178 aa3.63□□□□□ -1.83
VPS13B-211ENST00000522802 TMEM167BQ9NRX6 74 aa3.63□□□□□ -1.83
VPS13B-211ENST00000522802 LINC00959A0A1B0GUT2 108 aa3.62□□□□□ -1.83
VPS13B-211ENST00000522802 LYRM1O43325 122 aa3.62□□□□□ -1.83
VPS13B-211ENST00000522802 CXorf1O96002 111 aa3.62□□□□□ -1.83
VPS13B-211ENST00000522802 OR5AL1P0C617 328 aa3.62□□□□□ -1.83
VPS13B-211ENST00000522802 H2BFSP57053 126 aa3.62□□□□□ -1.83
VPS13B-211ENST00000522802 MT1HP80294 61 aa3.62□□□□□ -1.83
VPS13B-211ENST00000522802 RNASEKQ6P5S7 137 aaKnown RBP3.62□□□□□ -1.83
VPS13B-211ENST00000522802 RASL11AQ6T310 242 aa3.62□□□□□ -1.83
VPS13B-211ENST00000522802 OR5A1Q8NGJ0 315 aa3.62□□□□□ -1.83
VPS13B-211ENST00000522802 FMC1Q96HJ9 113 aa3.62□□□□□ -1.83
VPS13B-211ENST00000522802 CAMK2N2Q96S95 79 aa3.62□□□□□ -1.83
VPS13B-211ENST00000522802 ZFP30Q9Y2G7 519 aa3.62□□□□□ -1.83
VPS13B-211ENST00000522802 SYNE2Q8WXH0 6885 aaKnown RBP3.61□□□□□ -1.83
VPS13B-211ENST00000522802 FAM74A7A6NL05 159 aa3.61□□□□□ -1.83
VPS13B-211ENST00000522802 M0QXV9 152 aa3.61□□□□□ -1.83
VPS13B-211ENST00000522802 BCL2L11O43521 198 aa3.61□□□□□ -1.83
VPS13B-211ENST00000522802 CXCL1P09341 107 aa3.61□□□□□ -1.83
VPS13B-211ENST00000522802 NTF3P20783 257 aa3.61□□□□□ -1.83
VPS13B-211ENST00000522802 UBE2G1P62253 170 aa3.61□□□□□ -1.83
VPS13B-211ENST00000522802 ZNF726P1Q15940 193 aa3.61□□□□□ -1.83
VPS13B-211ENST00000522802 CNPY1Q3B7I2 92 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms