RNA–Protein interactions for RNA: ENST00000521491.1

CDH17-205, Transcript of cadherin 17, human

TSL 5

Gene CDH17, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH17-205	ENST00000521491	RETN	Q9HD89	108 aa		3.89	□□□□□ -1.79
CDH17-205	ENST00000521491	GAGE2D	Q9UEU5	116 aa		3.89	□□□□□ -1.79
CDH17-205	ENST00000521491	PRO0461	Q9UI25	63 aa		3.89	□□□□□ -1.79
CDH17-205	ENST00000521491	STAB2	Q8WWQ8	2551 aa		3.89	□□□□□ -1.79
CDH17-205	ENST00000521491	MUC4	Q99102	2169 aa		3.88	□□□□□ -1.79
CDH17-205	ENST00000521491		A0A087WX48	190 aa		3.88	□□□□□ -1.79
CDH17-205	ENST00000521491	IGHV3-16	A0A0C4DH30	117 aa		3.88	□□□□□ -1.79
CDH17-205	ENST00000521491		A0A1B0GX51	115 aa		3.88	□□□□□ -1.79
CDH17-205	ENST00000521491		A8MZ25	164 aa		3.88	□□□□□ -1.79
CDH17-205	ENST00000521491	SNCG	O76070	127 aa		3.88	□□□□□ -1.79
CDH17-205	ENST00000521491	ARMS2	P0C7Q2	107 aa		3.88	□□□□□ -1.79
CDH17-205	ENST00000521491	IFITM1	P13164	125 aa		3.88	□□□□□ -1.79
CDH17-205	ENST00000521491	FOXA3	P55318	350 aa	Predicted RBP	3.88	□□□□□ -1.79
CDH17-205	ENST00000521491	NDUFV3	P56181	108 aa	Known RBP	3.88	□□□□□ -1.79
CDH17-205	ENST00000521491	ZNF415	Q09FC8	603 aa		3.88	□□□□□ -1.79
CDH17-205	ENST00000521491	RIG	Q13278	110 aa		3.88	□□□□□ -1.79
CDH17-205	ENST00000521491	WFDC2	Q14508	124 aa		3.88	□□□□□ -1.79
CDH17-205	ENST00000521491	RRN3P1	Q2M238	152 aa		3.88	□□□□□ -1.79
CDH17-205	ENST00000521491	CFAP126	Q5VTH2	177 aa		3.88	□□□□□ -1.79
CDH17-205	ENST00000521491	KIR2DL5B	Q8NHK3	375 aa		3.88	□□□□□ -1.79
CDH17-205	ENST00000521491	RAB37	Q96AX2	223 aa		3.88	□□□□□ -1.79
CDH17-205	ENST00000521491	MDFIC	Q9P1T7	246 aa		3.88	□□□□□ -1.79
CDH17-205	ENST00000521491		M0R381	172 aa		3.87	□□□□□ -1.79
CDH17-205	ENST00000521491	SNAI2	O43623	268 aa		3.87	□□□□□ -1.79
CDH17-205	ENST00000521491	HBD	P02042	147 aa		3.87	□□□□□ -1.79
CDH17-205	ENST00000521491	ATP5G1	P05496	136 aa		3.87	□□□□□ -1.79
CDH17-205	ENST00000521491	RPS28	P62857	69 aa	Known RBP	3.87	□□□□□ -1.79
CDH17-205	ENST00000521491	C11orf72	Q8NBR9	251 aa		3.87	□□□□□ -1.79
CDH17-205	ENST00000521491	OR13C6P	Q8NH95	151 aa		3.87	□□□□□ -1.79
CDH17-205	ENST00000521491	TMEM263	Q8WUH6	116 aa	Known RBP	3.87	□□□□□ -1.79
CDH17-205	ENST00000521491	C16orf74	Q96GX8	76 aa		3.87	□□□□□ -1.79
CDH17-205	ENST00000521491	C9orf85	Q96MD7	179 aa		3.87	□□□□□ -1.79
CDH17-205	ENST00000521491	LINC01600	Q96MT4	127 aa		3.87	□□□□□ -1.79
CDH17-205	ENST00000521491	PRELID3A	Q96N28	172 aa		3.87	□□□□□ -1.79
CDH17-205	ENST00000521491	LINC00467	Q9BRT7	94 aa		3.87	□□□□□ -1.79
CDH17-205	ENST00000521491	CHAC1	Q9BUX1	264 aa		3.87	□□□□□ -1.79
CDH17-205	ENST00000521491	PHLDA3	Q9Y5J5	127 aa		3.87	□□□□□ -1.79
CDH17-205	ENST00000521491	DNAH7	Q8WXX0	4024 aa		3.87	□□□□□ -1.79
CDH17-205	ENST00000521491	NACA	E9PAV3	2078 aa		3.86	□□□□□ -1.79
CDH17-205	ENST00000521491	STARD9	Q9P2P6	4700 aa		3.86	□□□□□ -1.79
CDH17-205	ENST00000521491		A0A1B0GUT8	65 aa		3.86	□□□□□ -1.79
CDH17-205	ENST00000521491	DEFB4A	O15263	64 aa		3.86	□□□□□ -1.79
CDH17-205	ENST00000521491	ATP5L	O75964	103 aa		3.86	□□□□□ -1.79
CDH17-205	ENST00000521491	MT-ATP8	P03928	68 aa		3.86	□□□□□ -1.79
CDH17-205	ENST00000521491	CAMP	P49913	170 aa		3.86	□□□□□ -1.79
CDH17-205	ENST00000521491	EMP1	P54849	157 aa		3.86	□□□□□ -1.79
CDH17-205	ENST00000521491	XG	P55808	180 aa		3.86	□□□□□ -1.79
CDH17-205	ENST00000521491	TWIST1	Q15672	202 aa		3.86	□□□□□ -1.79
CDH17-205	ENST00000521491	SPANXN1	Q5VSR9	72 aa		3.86	□□□□□ -1.79
CDH17-205	ENST00000521491	DGAT2L7P	Q6IED9	249 aa		3.86	□□□□□ -1.79
CDH17-205	ENST00000521491	PRSS3P2	Q8NHM4	247 aa		3.86	□□□□□ -1.79
CDH17-205	ENST00000521491	C20orf78	Q9BR46	151 aa		3.86	□□□□□ -1.79
CDH17-205	ENST00000521491	OVOL2	Q9BRP0	275 aa		3.86	□□□□□ -1.79
CDH17-205	ENST00000521491	EDA2R	Q9HAV5	297 aa		3.86	□□□□□ -1.79
CDH17-205	ENST00000521491	MSRB1	Q9NZV6	116 aa		3.86	□□□□□ -1.79
CDH17-205	ENST00000521491	TRGV1	A0A0A0MS02	117 aa		3.85	□□□□□ -1.79
CDH17-205	ENST00000521491	IGHV4-28	A0A0C4DH34	117 aa		3.85	□□□□□ -1.79
CDH17-205	ENST00000521491	PLAC8L1	A1L4L8	177 aa		3.85	□□□□□ -1.79
CDH17-205	ENST00000521491	LINC01546	A6NGU7	62 aa		3.85	□□□□□ -1.79
CDH17-205	ENST00000521491		A8MWV9	139 aa		3.85	□□□□□ -1.79
CDH17-205	ENST00000521491		J3KT08	172 aa		3.85	□□□□□ -1.79
CDH17-205	ENST00000521491	NXPH4	O95158	308 aa		3.85	□□□□□ -1.79
CDH17-205	ENST00000521491	FXYD2	P54710	66 aa		3.85	□□□□□ -1.79
CDH17-205	ENST00000521491	CACNG7	P62955	275 aa		3.85	□□□□□ -1.79
CDH17-205	ENST00000521491	C12orf74	Q32Q52	190 aa		3.85	□□□□□ -1.79
CDH17-205	ENST00000521491	ZNF493	Q6ZR52	646 aa		3.85	□□□□□ -1.79
CDH17-205	ENST00000521491		Q6ZTI0	123 aa		3.85	□□□□□ -1.79
CDH17-205	ENST00000521491	LINC00173	Q6ZV60	143 aa		3.85	□□□□□ -1.79
CDH17-205	ENST00000521491	SH2D6	Q7Z4S9	175 aa		3.85	□□□□□ -1.79
CDH17-205	ENST00000521491		Q8NAQ8	132 aa		3.85	□□□□□ -1.79
CDH17-205	ENST00000521491	IFI27L1	Q96BM0	104 aa		3.85	□□□□□ -1.79
CDH17-205	ENST00000521491	TM2D3	Q9BRN9	247 aa		3.85	□□□□□ -1.79
CDH17-205	ENST00000521491	CNFN	Q9BYD5	112 aa		3.85	□□□□□ -1.79
CDH17-205	ENST00000521491	KRTAP9-8	Q9BYQ0	159 aa		3.85	□□□□□ -1.79
CDH17-205	ENST00000521491	IMUP	Q9GZP8	106 aa		3.85	□□□□□ -1.79
CDH17-205	ENST00000521491	JPT2	Q9H910	190 aa		3.85	□□□□□ -1.79
CDH17-205	ENST00000521491	NOP10	Q9NPE3	64 aa	Known RBP	3.85	□□□□□ -1.79
CDH17-205	ENST00000521491	NHP2	Q9NX24	153 aa	Known RBP	3.85	□□□□□ -1.79
CDH17-205	ENST00000521491	CSDC2	Q9Y534	153 aa	Known RBP	3.85	□□□□□ -1.79
CDH17-205	ENST00000521491	LYST	Q99698	3801 aa		3.84	□□□□□ -1.79
CDH17-205	ENST00000521491	CSMD3	Q7Z407	3707 aa		3.84	□□□□□ -1.79
CDH17-205	ENST00000521491	TRBV25-1	A0A075B6N4	114 aa		3.84	□□□□□ -1.79
CDH17-205	ENST00000521491	IGHV4-4	A0A075B6R2	117 aa		3.84	□□□□□ -1.79
CDH17-205	ENST00000521491	FAM240A	A0A1B0GVK7	77 aa		3.84	□□□□□ -1.79
CDH17-205	ENST00000521491	SMIM9	A6NGZ8	99 aa		3.84	□□□□□ -1.79
CDH17-205	ENST00000521491		M0R2P5	195 aa		3.84	□□□□□ -1.79
CDH17-205	ENST00000521491	MGP	P08493	103 aa		3.84	□□□□□ -1.79
CDH17-205	ENST00000521491	SCGB1C2	P0DMR2	95 aa		3.84	□□□□□ -1.79
CDH17-205	ENST00000521491	MIF	P14174	115 aa		3.84	□□□□□ -1.79
CDH17-205	ENST00000521491	NMU	P48645	174 aa		3.84	□□□□□ -1.79
CDH17-205	ENST00000521491	ZNF876P	Q49A33	203 aa		3.84	□□□□□ -1.79
CDH17-205	ENST00000521491	LCE5A	Q5TCM9	118 aa		3.84	□□□□□ -1.79
CDH17-205	ENST00000521491	FAM74A4	Q5TZK3	123 aa		3.84	□□□□□ -1.79
CDH17-205	ENST00000521491	AMN1	Q8IY45	258 aa		3.84	□□□□□ -1.79
CDH17-205	ENST00000521491	CELA1	Q9UNI1	258 aa		3.84	□□□□□ -1.79
CDH17-205	ENST00000521491	TP53TG1	Q9Y2A0	90 aa		3.84	□□□□□ -1.79
CDH17-205	ENST00000521491	IGHV3-73	A0A0B4J1V6	119 aa		3.83	□□□□□ -1.8
CDH17-205	ENST00000521491	PRY	O14603	147 aa		3.83	□□□□□ -1.8
CDH17-205	ENST00000521491	DPM2	O94777	84 aa		3.83	□□□□□ -1.8
CDH17-205	ENST00000521491	IGHV3-53	P01767	116 aa		3.83	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms