RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 IGKV1-5P01602 117 aa2.15□□□□□ -2.07
SKP1-208ENST00000521216 IL9P15248 144 aa2.15□□□□□ -2.07
SKP1-208ENST00000521216 FUSP35637 526 aaKnown RBP eCLIP2.15□□□□□ -2.07
SKP1-208ENST00000521216 BLCAPP62952 87 aa2.15□□□□□ -2.07
SKP1-208ENST00000521216 LINC01554Q52M75 96 aa2.15□□□□□ -2.07
SKP1-208ENST00000521216 LYPD5Q6UWN5 251 aa2.15□□□□□ -2.07
SKP1-208ENST00000521216 WFDC5Q8TCV5 224 aa2.15□□□□□ -2.07
SKP1-208ENST00000521216 Q96M85 177 aa2.15□□□□□ -2.07
SKP1-208ENST00000521216 WFDC6Q9BQY6 131 aa2.15□□□□□ -2.07
SKP1-208ENST00000521216 NPCDR1Q9BY65 106 aa2.15□□□□□ -2.07
SKP1-208ENST00000521216 CYP4F30PQ9H0H9 118 aa2.15□□□□□ -2.07
SKP1-208ENST00000521216 DOCK4Q8N1I0 1966 aa2.15□□□□□ -2.07
SKP1-208ENST00000521216 PLXNA2O75051 1894 aa2.14□□□□□ -2.07
SKP1-208ENST00000521216 FBN1P35555 2871 aaKnown RBP2.14□□□□□ -2.07
SKP1-208ENST00000521216 TRAV12-1A0A0B4J245 112 aa2.14□□□□□ -2.07
SKP1-208ENST00000521216 IGKV1-9A0A0C4DH69 117 aa2.14□□□□□ -2.07
SKP1-208ENST00000521216 A6NN06 94 aa2.14□□□□□ -2.07
SKP1-208ENST00000521216 BUB1B-PAK6H3BSN5 160 aa2.14□□□□□ -2.07
SKP1-208ENST00000521216 IGHV3-33P01772 117 aa2.14□□□□□ -2.07
SKP1-208ENST00000521216 PRM2P04554 102 aa2.14□□□□□ -2.07
SKP1-208ENST00000521216 SAA1P0DJI8 122 aaPredicted RBP2.14□□□□□ -2.07
SKP1-208ENST00000521216 ZNF22P17026 224 aaPredicted RBP2.14□□□□□ -2.07
SKP1-208ENST00000521216 HMGA1P17096 107 aaKnown RBP2.14□□□□□ -2.07
SKP1-208ENST00000521216 RNASE4P34096 147 aaKnown RBP2.14□□□□□ -2.07
SKP1-208ENST00000521216 LINC00313P59037 77 aa2.14□□□□□ -2.07
SKP1-208ENST00000521216 GDF5OSQ5U4N7 250 aa2.14□□□□□ -2.07
SKP1-208ENST00000521216 SPANXN1Q5VSR9 72 aa2.14□□□□□ -2.07
SKP1-208ENST00000521216 ZNF818PQ6ZRF7 136 aa2.14□□□□□ -2.07
SKP1-208ENST00000521216 PSENENQ9NZ42 101 aa2.14□□□□□ -2.07
SKP1-208ENST00000521216 LINC00474Q9P2X8 69 aa2.14□□□□□ -2.07
SKP1-208ENST00000521216 UBE2D4Q9Y2X8 147 aa2.14□□□□□ -2.07
SKP1-208ENST00000521216 U3KQK5 164 aa2.14□□□□□ -2.07
SKP1-208ENST00000521216 ZNF831Q5JPB2 1677 aa2.14□□□□□ -2.07
SKP1-208ENST00000521216 LCTP09848 1927 aa2.13□□□□□ -2.07
SKP1-208ENST00000521216 IGKV2D-26A0A0A0MRZ7 120 aa2.13□□□□□ -2.07
SKP1-208ENST00000521216 A0A1W2PNM2 257 aa2.13□□□□□ -2.07
SKP1-208ENST00000521216 TMEM30CPA0ZSE6 113 aa2.13□□□□□ -2.07
SKP1-208ENST00000521216 CPSF4LA6NMK7 179 aaKnown RBP2.13□□□□□ -2.07
SKP1-208ENST00000521216 HIGD1CA8MV81 97 aa2.13□□□□□ -2.07
SKP1-208ENST00000521216 HMGN4O00479 90 aa2.13□□□□□ -2.07
SKP1-208ENST00000521216 MIFP14174 115 aa2.13□□□□□ -2.07
SKP1-208ENST00000521216 FCER1GP30273 86 aa2.13□□□□□ -2.07
SKP1-208ENST00000521216 GPHB5Q86YW7 130 aa2.13□□□□□ -2.07
SKP1-208ENST00000521216 FAM223AQ8IWN6 122 aa2.13□□□□□ -2.07
SKP1-208ENST00000521216 C20orf197Q8N268 126 aa2.13□□□□□ -2.07
SKP1-208ENST00000521216 FAM216BQ8N7L0 139 aa2.13□□□□□ -2.07
SKP1-208ENST00000521216 SMCR5Q8TEV8 140 aa2.13□□□□□ -2.07
SKP1-208ENST00000521216 NABP2Q9BQ15 211 aa2.13□□□□□ -2.07
SKP1-208ENST00000521216 PHLDA3Q9Y5J5 127 aa2.13□□□□□ -2.07
SKP1-208ENST00000521216 LHFPL6Q9Y693 200 aa2.13□□□□□ -2.07
SKP1-208ENST00000521216 NCOA6Q14686 2063 aaPredicted RBP2.13□□□□□ -2.07
SKP1-208ENST00000521216 LTBP2Q14767 1821 aa2.12□□□□□ -2.07
SKP1-208ENST00000521216 SCN3AQ9NY46 2000 aa2.12□□□□□ -2.07
SKP1-208ENST00000521216 FAM223BA6NKX1 122 aa2.12□□□□□ -2.07
SKP1-208ENST00000521216 K7EMI3 77 aa2.12□□□□□ -2.07
SKP1-208ENST00000521216 SPINK4O60575 86 aa2.12□□□□□ -2.07
SKP1-208ENST00000521216 CGB3P0DN86 165 aa2.12□□□□□ -2.07
SKP1-208ENST00000521216 CGB7P0DN87 165 aa2.12□□□□□ -2.07
SKP1-208ENST00000521216 FGF12P61328 243 aa2.12□□□□□ -2.07
SKP1-208ENST00000521216 LINC01590Q5TEZ4 76 aa2.12□□□□□ -2.07
SKP1-208ENST00000521216 SCXQ7RTU7 201 aa2.12□□□□□ -2.07
SKP1-208ENST00000521216 DYNAPQ8N1N2 210 aa2.12□□□□□ -2.07
SKP1-208ENST00000521216 CCL4L1Q8NHW4 92 aa2.12□□□□□ -2.07
SKP1-208ENST00000521216 FAM167A-AS1Q96KT0 104 aa2.12□□□□□ -2.07
SKP1-208ENST00000521216 NUMA1Q14980 2115 aa2.12□□□□□ -2.07
SKP1-208ENST00000521216 COL4A6Q14031 1691 aa2.12□□□□□ -2.07
SKP1-208ENST00000521216 TRPM6Q9BX84 2022 aa2.12□□□□□ -2.07
SKP1-208ENST00000521216 TRBV6-1A0A0K0K1D8 114 aa2.11□□□□□ -2.07
SKP1-208ENST00000521216 F8VRH5 84 aa2.11□□□□□ -2.07
SKP1-208ENST00000521216 F8WEM9 126 aa2.11□□□□□ -2.07
SKP1-208ENST00000521216 GNRH2O43555 120 aa2.11□□□□□ -2.07
SKP1-208ENST00000521216 IGHV3-30P01768 117 aa2.11□□□□□ -2.07
SKP1-208ENST00000521216 ARL14EPLP0DKL9 152 aa2.11□□□□□ -2.07
SKP1-208ENST00000521216 IGHV3-30-5P0DP03 117 aa2.11□□□□□ -2.07
SKP1-208ENST00000521216 FXYD3Q14802 87 aa2.11□□□□□ -2.07
SKP1-208ENST00000521216 PATE2Q6UY27 113 aa2.11□□□□□ -2.07
SKP1-208ENST00000521216 LINC00269Q8N2A0 174 aa2.11□□□□□ -2.07
SKP1-208ENST00000521216 Q8NAQ8 132 aa2.11□□□□□ -2.07
SKP1-208ENST00000521216 TMEM263Q8WUH6 116 aaKnown RBP2.11□□□□□ -2.07
SKP1-208ENST00000521216 TMEM141Q96I45 108 aa2.11□□□□□ -2.07
SKP1-208ENST00000521216 R4GMQ9 66 aa2.11□□□□□ -2.07
SKP1-208ENST00000521216 DOCK11Q5JSL3 2073 aa2.11□□□□□ -2.07
SKP1-208ENST00000521216 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
SKP1-208ENST00000521216 A0A0J9YX75 114 aa2.1□□□□□ -2.07
SKP1-208ENST00000521216 A0A0J9YY99 117 aa2.1□□□□□ -2.07
SKP1-208ENST00000521216 A0A1B0GU33 70 aa2.1□□□□□ -2.07
SKP1-208ENST00000521216 A0A1B0GUT8 65 aa2.1□□□□□ -2.07
SKP1-208ENST00000521216 ZNF815PA8K554 130 aa2.1□□□□□ -2.07
SKP1-208ENST00000521216 PPP1R17O96001 155 aa2.1□□□□□ -2.07
SKP1-208ENST00000521216 COX6B1P14854 86 aa2.1□□□□□ -2.07
SKP1-208ENST00000521216 RPL27AP46776 148 aaKnown RBP2.1□□□□□ -2.07
SKP1-208ENST00000521216 Q8N6K4 173 aa2.1□□□□□ -2.07
SKP1-208ENST00000521216 CLEC2BQ92478 149 aa2.1□□□□□ -2.07
SKP1-208ENST00000521216 ARHGAP5-AS1Q96IT6 56 aa2.1□□□□□ -2.07
SKP1-208ENST00000521216 LIMD2Q9BT23 127 aa2.1□□□□□ -2.07
SKP1-208ENST00000521216 PROK2Q9HC23 129 aa2.1□□□□□ -2.07
SKP1-208ENST00000521216 XAGE1AQ9HD64 81 aa2.1□□□□□ -2.07
SKP1-208ENST00000521216 EML6Q6ZMW3 1958 aa2.1□□□□□ -2.07
SKP1-208ENST00000521216 PCDH15Q96QU1 1955 aa2.1□□□□□ -2.07
SKP1-208ENST00000521216 KIAA2026Q5HYC2 2103 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms