RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 FAM19A5Q7Z5A7 132 aaPredicted RBP7.74□□□□□ -1.17
SRGAP3-212ENST00000520860 FAM168BA1KXE4 195 aa7.73□□□□□ -1.17
SRGAP3-212ENST00000520860 F2Z2F3 143 aa7.73□□□□□ -1.17
SRGAP3-212ENST00000520860 ESDP10768 282 aa7.73□□□□□ -1.17
SRGAP3-212ENST00000520860 TPRXLQ17RH7 258 aa7.73□□□□□ -1.17
SRGAP3-212ENST00000520860 RNF151Q2KHN1 245 aa7.73□□□□□ -1.17
SRGAP3-212ENST00000520860 RPL7L1Q6DKI1 246 aaKnown RBP7.73□□□□□ -1.17
SRGAP3-212ENST00000520860 GATD1Q8NB37 220 aa7.73□□□□□ -1.17
SRGAP3-212ENST00000520860 RPP21Q9H633 154 aaKnown RBP7.73□□□□□ -1.17
SRGAP3-212ENST00000520860 RETNLBQ9BQ08 111 aa7.72□□□□□ -1.17
SRGAP3-212ENST00000520860 XKRY2A2RUG3 117 aa7.71□□□□□ -1.18
SRGAP3-212ENST00000520860 HMSDA8MTL9 139 aa7.71□□□□□ -1.18
SRGAP3-212ENST00000520860 SRSF3P84103 164 aaKnown RBP7.71□□□□□ -1.18
SRGAP3-212ENST00000520860 TYMSOSQ8TAI1 123 aa7.71□□□□□ -1.18
SRGAP3-212ENST00000520860 RPL39LQ96EH5 51 aaKnown RBP7.71□□□□□ -1.18
SRGAP3-212ENST00000520860 IMMP2LQ96T52 175 aa7.71□□□□□ -1.18
SRGAP3-212ENST00000520860 FXYD6-FXYD2A0A087WZ82 144 aa7.7□□□□□ -1.18
SRGAP3-212ENST00000520860 SDHAF1A6NFY7 115 aa7.7□□□□□ -1.18
SRGAP3-212ENST00000520860 C1orf196B1AJZ1 125 aa7.7□□□□□ -1.18
SRGAP3-212ENST00000520860 M0QXV9 152 aa7.7□□□□□ -1.18
SRGAP3-212ENST00000520860 PMCHP20382 165 aa7.7□□□□□ -1.18
SRGAP3-212ENST00000520860 SPAG11BQ08648 103 aa7.7□□□□□ -1.18
SRGAP3-212ENST00000520860 LYZL1Q6UWQ5 148 aa7.7□□□□□ -1.18
SRGAP3-212ENST00000520860 MRAP2Q96G30 205 aa7.7□□□□□ -1.18
SRGAP3-212ENST00000520860 CDC42SE2Q9NRR3 84 aa7.7□□□□□ -1.18
SRGAP3-212ENST00000520860 MUC17Q685J3 4493 aa7.7□□□□□ -1.18
SRGAP3-212ENST00000520860 IGLV7-46A0A075B6I9 117 aa7.69□□□□□ -1.18
SRGAP3-212ENST00000520860 ZNF861PO60384 105 aa7.69□□□□□ -1.18
SRGAP3-212ENST00000520860 IFNA1P01562 189 aa7.69□□□□□ -1.18
SRGAP3-212ENST00000520860 TMUB2Q71RG4 321 aa7.69□□□□□ -1.18
SRGAP3-212ENST00000520860 G3V3Q6 166 aa7.68□□□□□ -1.18
SRGAP3-212ENST00000520860 I3L3M4 83 aa7.68□□□□□ -1.18
SRGAP3-212ENST00000520860 CRYGAP11844 174 aa7.68□□□□□ -1.18
SRGAP3-212ENST00000520860 ZNF345Q14585 488 aa7.68□□□□□ -1.18
SRGAP3-212ENST00000520860 MRPL52Q86TS9 123 aaKnown RBP7.68□□□□□ -1.18
SRGAP3-212ENST00000520860 MRPL35Q9NZE8 188 aaKnown RBP7.68□□□□□ -1.18
SRGAP3-212ENST00000520860 A0A087X002 238 aa7.67□□□□□ -1.18
SRGAP3-212ENST00000520860 ARPC5O15511 151 aa7.67□□□□□ -1.18
SRGAP3-212ENST00000520860 RPL35P42766 123 aaKnown RBP7.67□□□□□ -1.18
SRGAP3-212ENST00000520860 TWIST1Q15672 202 aa7.67□□□□□ -1.18
SRGAP3-212ENST00000520860 GAGE2EQ4V326 116 aa7.67□□□□□ -1.18
SRGAP3-212ENST00000520860 TEX261Q6UWH6 196 aa7.67□□□□□ -1.18
SRGAP3-212ENST00000520860 C5orf38Q86SI9 138 aa7.67□□□□□ -1.18
SRGAP3-212ENST00000520860 GAGE2DQ9UEU5 116 aa7.67□□□□□ -1.18
SRGAP3-212ENST00000520860 KANTRA0A1W2PQU2 76 aa7.66□□□□□ -1.18
SRGAP3-212ENST00000520860 OR10D4PQ8NGN7 298 aa7.66□□□□□ -1.18
SRGAP3-212ENST00000520860 TRAV13-1A0A0B4J241 112 aa7.65□□□□□ -1.18
SRGAP3-212ENST00000520860 F8WDY8 70 aa7.65□□□□□ -1.18
SRGAP3-212ENST00000520860 SMLR1H3BR10 107 aa7.65□□□□□ -1.18
SRGAP3-212ENST00000520860 NDUFA1O15239 70 aa7.65□□□□□ -1.18
SRGAP3-212ENST00000520860 TLX1NBP0CAT3 122 aa7.65□□□□□ -1.18
SRGAP3-212ENST00000520860 CTRLP40313 264 aa7.65□□□□□ -1.18
SRGAP3-212ENST00000520860 SMIM15Q7Z3B0 74 aa7.65□□□□□ -1.18
SRGAP3-212ENST00000520860 C9orf62Q8N4C0 152 aa7.65□□□□□ -1.18
SRGAP3-212ENST00000520860 TMEM242Q9NWH2 141 aa7.65□□□□□ -1.18
SRGAP3-212ENST00000520860 A0A1B0GV50 99 aa7.64□□□□□ -1.19
SRGAP3-212ENST00000520860 TSHBP01222 138 aa7.64□□□□□ -1.19
SRGAP3-212ENST00000520860 TMEM241Q24JQ0 296 aa7.64□□□□□ -1.19
SRGAP3-212ENST00000520860 CENPWQ5EE01 88 aa7.64□□□□□ -1.19
SRGAP3-212ENST00000520860 LINC00173Q6ZV60 143 aa7.64□□□□□ -1.19
SRGAP3-212ENST00000520860 KRTAP7-1Q8IUC3 87 aa7.64□□□□□ -1.19
SRGAP3-212ENST00000520860 FAM210AQ96ND0 272 aa7.64□□□□□ -1.19
SRGAP3-212ENST00000520860 C7orf77A4D0Y5 90 aa7.63□□□□□ -1.19
SRGAP3-212ENST00000520860 Q5BKY6 102 aa7.63□□□□□ -1.19
SRGAP3-212ENST00000520860 KCNRGQ8N5I3 272 aa7.63□□□□□ -1.19
SRGAP3-212ENST00000520860 ORAOV1Q8WV07 137 aa7.63□□□□□ -1.19
SRGAP3-212ENST00000520860 SFT2D1Q8WV19 159 aa7.63□□□□□ -1.19
SRGAP3-212ENST00000520860 SMDT1Q9H4I9 107 aa7.63□□□□□ -1.19
SRGAP3-212ENST00000520860 TRBV6-5A0A0K0K1A5 114 aa7.62□□□□□ -1.19
SRGAP3-212ENST00000520860 RNASE13Q5GAN3 156 aaKnown RBP7.62□□□□□ -1.19
SRGAP3-212ENST00000520860 SLC51BQ86UW2 128 aa7.62□□□□□ -1.19
SRGAP3-212ENST00000520860 LINC00304Q8N9R0 145 aa7.62□□□□□ -1.19
SRGAP3-212ENST00000520860 CNFNQ9BYD5 112 aa7.62□□□□□ -1.19
SRGAP3-212ENST00000520860 NUPR1O60356 82 aa7.61□□□□□ -1.19
SRGAP3-212ENST00000520860 SMAGPQ0VAQ4 97 aa7.61□□□□□ -1.19
SRGAP3-212ENST00000520860 C10orf25Q5T742 122 aa7.61□□□□□ -1.19
SRGAP3-212ENST00000520860 UNQ6190/PRO20217Q6UXQ8 127 aa7.61□□□□□ -1.19
SRGAP3-212ENST00000520860 ST20Q9HBF5 79 aa7.61□□□□□ -1.19
SRGAP3-212ENST00000520860 RPL28P46779 137 aaKnown RBP7.6□□□□□ -1.19
SRGAP3-212ENST00000520860 GNG4P50150 75 aa7.6□□□□□ -1.19
SRGAP3-212ENST00000520860 MBD3L1Q8WWY6 194 aa7.6□□□□□ -1.19
SRGAP3-212ENST00000520860 C11orf52Q96A22 123 aa7.6□□□□□ -1.19
SRGAP3-212ENST00000520860 SMIM12Q96EX1 92 aa7.6□□□□□ -1.19
SRGAP3-212ENST00000520860 RNASE7Q9H1E1 156 aaKnown RBP7.6□□□□□ -1.19
SRGAP3-212ENST00000520860 PPDPFQ9H3Y8 114 aa7.6□□□□□ -1.19
SRGAP3-212ENST00000520860 BIN3Q9NQY0 253 aa7.6□□□□□ -1.19
SRGAP3-212ENST00000520860 C6orf48Q9UBA6 75 aa7.6□□□□□ -1.19
SRGAP3-212ENST00000520860 FOXA3P55318 350 aaPredicted RBP7.59□□□□□ -1.19
SRGAP3-212ENST00000520860 FAM213BQ8TBF2 198 aa7.59□□□□□ -1.19
SRGAP3-212ENST00000520860 CTDSP1Q9GZU7 261 aa7.59□□□□□ -1.19
SRGAP3-212ENST00000520860 CSDC2Q9Y534 153 aaKnown RBP7.59□□□□□ -1.19
SRGAP3-212ENST00000520860 FCER1GP30273 86 aa7.57□□□□□ -1.2
SRGAP3-212ENST00000520860 CCL20P78556 96 aa7.57□□□□□ -1.2
SRGAP3-212ENST00000520860 ASB16-AS1Q495Z4 193 aa7.57□□□□□ -1.2
SRGAP3-212ENST00000520860 KRTAP13-2Q52LG2 175 aa7.57□□□□□ -1.2
SRGAP3-212ENST00000520860 LINC00337Q8N6G1 96 aa7.57□□□□□ -1.2
SRGAP3-212ENST00000520860 ANAPC11Q9NYG5 84 aa7.57□□□□□ -1.2
SRGAP3-212ENST00000520860 UBE2D4Q9Y2X8 147 aa7.57□□□□□ -1.2
SRGAP3-212ENST00000520860 TRBV27A0A0K0K1C4 114 aa7.56□□□□□ -1.2
SRGAP3-212ENST00000520860 RAB19A4D1S5 217 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms