RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 DEFB123Q8N688 67 aa-1.43□□□□□ -2.64
PCM1-208ENST00000518877 V9GYQ6 96 aa-1.43□□□□□ -2.64
PCM1-208ENST00000518877 SPG11Q96JI7 2443 aa-1.43□□□□□ -2.64
PCM1-208ENST00000518877 CASKIN1Q8WXD9 1431 aa-1.43□□□□□ -2.64
PCM1-208ENST00000518877 ADGRB1O14514 1584 aa-1.43□□□□□ -2.64
PCM1-208ENST00000518877 TSTD3H0UI37 97 aa-1.44□□□□□ -2.64
PCM1-208ENST00000518877 IL5P05113 134 aa-1.44□□□□□ -2.64
PCM1-208ENST00000518877 NBEAP1P0C6P0 100 aa-1.44□□□□□ -2.64
PCM1-208ENST00000518877 CBLN1P23435 193 aa-1.44□□□□□ -2.64
PCM1-208ENST00000518877 SMIM4Q8WVI0 70 aa-1.44□□□□□ -2.64
PCM1-208ENST00000518877 AIF1LQ9BQI0 150 aa-1.44□□□□□ -2.64
PCM1-208ENST00000518877 HSPB11Q9Y547 144 aa-1.44□□□□□ -2.64
PCM1-208ENST00000518877 LYSTQ99698 3801 aa-1.44□□□□□ -2.64
PCM1-208ENST00000518877 PLECQ15149 4684 aaKnown RBP-1.45□□□□□ -2.64
PCM1-208ENST00000518877 LINC00694P0DN24 101 aa-1.45□□□□□ -2.64
PCM1-208ENST00000518877 Q6ZUT4 128 aa-1.45□□□□□ -2.64
PCM1-208ENST00000518877 SAR1AQ9NR31 198 aa-1.45□□□□□ -2.64
PCM1-208ENST00000518877 MRC1P22897 1456 aa-1.45□□□□□ -2.64
PCM1-208ENST00000518877 NSD3Q9BZ95 1437 aa-1.46□□□□□ -2.64
PCM1-208ENST00000518877 CTXND1A0A1B0GTU2 59 aa-1.46□□□□□ -2.64
PCM1-208ENST00000518877 CCL8P80075 99 aa-1.46□□□□□ -2.64
PCM1-208ENST00000518877 HIST1H1AQ02539 215 aaPredicted RBP-1.46□□□□□ -2.64
PCM1-208ENST00000518877 MORN2Q502X0 79 aa-1.46□□□□□ -2.64
PCM1-208ENST00000518877 GAPVD1Q14C86 1478 aa-1.46□□□□□ -2.64
PCM1-208ENST00000518877 TEP1Q99973 2627 aaKnown RBP-1.47□□□□□ -2.64
PCM1-208ENST00000518877 NCR2O95944 276 aa-1.47□□□□□ -2.64
PCM1-208ENST00000518877 CCDC153Q494R4 210 aa-1.47□□□□□ -2.64
PCM1-208ENST00000518877 Q6JHZ5 121 aa-1.47□□□□□ -2.64
PCM1-208ENST00000518877 R4GMQ9 66 aa-1.47□□□□□ -2.64
PCM1-208ENST00000518877 SMIM15Q7Z3B0 74 aa-1.48□□□□□ -2.65
PCM1-208ENST00000518877 MMGT1Q8N4V1 131 aa-1.48□□□□□ -2.65
PCM1-208ENST00000518877 ANK3Q12955 4377 aaKnown RBP-1.48□□□□□ -2.65
PCM1-208ENST00000518877 APOBP04114 4563 aaKnown RBP-1.48□□□□□ -2.65
PCM1-208ENST00000518877 PIPP12273 146 aaPredicted RBP-1.49□□□□□ -2.65
PCM1-208ENST00000518877 TMEM170BQ5T4T1 132 aa-1.49□□□□□ -2.65
PCM1-208ENST00000518877 SEC11CQ9BY50 192 aa-1.49□□□□□ -2.65
PCM1-208ENST00000518877 APLNQ9ULZ1 77 aa-1.49□□□□□ -2.65
PCM1-208ENST00000518877 TMEM2Q9UHN6 1383 aa-1.49□□□□□ -2.65
PCM1-208ENST00000518877 DAPK1P53355 1430 aa-1.49□□□□□ -2.65
PCM1-208ENST00000518877 PRRC2CQ9Y520 2896 aaKnown RBP-1.5□□□□□ -2.65
PCM1-208ENST00000518877 DNAH11Q96DT5 4516 aa-1.5□□□□□ -2.65
PCM1-208ENST00000518877 HCG22E2RYF7 251 aa-1.5□□□□□ -2.65
PCM1-208ENST00000518877 SYS1-DBNDD2H3BUS1 97 aa-1.5□□□□□ -2.65
PCM1-208ENST00000518877 SNCGO76070 127 aa-1.5□□□□□ -2.65
PCM1-208ENST00000518877 SIX6O95475 246 aa-1.5□□□□□ -2.65
PCM1-208ENST00000518877 IFNGP01579 166 aa-1.5□□□□□ -2.65
PCM1-208ENST00000518877 DBIP07108 87 aaKnown RBP-1.5□□□□□ -2.65
PCM1-208ENST00000518877 C9orf62Q8N4C0 152 aa-1.5□□□□□ -2.65
PCM1-208ENST00000518877 SPTSSAQ969W0 71 aa-1.5□□□□□ -2.65
PCM1-208ENST00000518877 AMELXQ99217 191 aa-1.5□□□□□ -2.65
PCM1-208ENST00000518877 PSMG3Q9BT73 122 aaPredicted RBP-1.5□□□□□ -2.65
PCM1-208ENST00000518877 NWD2Q9ULI1 1742 aa-1.5□□□□□ -2.65
PCM1-208ENST00000518877 SBF2Q86WG5 1849 aa-1.5□□□□□ -2.65
PCM1-208ENST00000518877 NIPBLQ6KC79 2804 aaeCLIP-1.5□□□□□ -2.65
PCM1-208ENST00000518877 NBASA2RRP1 2371 aa-1.51□□□□□ -2.65
PCM1-208ENST00000518877 DNHD1Q96M86 4753 aa-1.51□□□□□ -2.65
PCM1-208ENST00000518877 NDUFB6O95139 128 aa-1.51□□□□□ -2.65
PCM1-208ENST00000518877 COX8AP10176 69 aa-1.51□□□□□ -2.65
PCM1-208ENST00000518877 COX17Q14061 63 aa-1.51□□□□□ -2.65
PCM1-208ENST00000518877 MRPL40Q9NQ50 206 aaKnown RBP-1.51□□□□□ -2.65
PCM1-208ENST00000518877 POLA1P09884 1462 aaPredicted RBP-1.51□□□□□ -2.65
PCM1-208ENST00000518877 PXDNQ92626 1479 aa-1.51□□□□□ -2.65
PCM1-208ENST00000518877 C10orf128Q5T292 105 aa-1.52□□□□□ -2.65
PCM1-208ENST00000518877 CTAGE3PQ8IX95 158 aa-1.52□□□□□ -2.65
PCM1-208ENST00000518877 SMIM3Q9BZL3 60 aa-1.52□□□□□ -2.65
PCM1-208ENST00000518877 OVOS2A0A0J9YW53 1432 aa-1.53□□□□□ -2.65
PCM1-208ENST00000518877 GNG14A0A1W2PPG7 69 aa-1.53□□□□□ -2.65
PCM1-208ENST00000518877 DISP2A7MBM2 1401 aa-1.53□□□□□ -2.65
PCM1-208ENST00000518877 TSPAN19P0C672 248 aa-1.53□□□□□ -2.65
PCM1-208ENST00000518877 LAMA3Q16787 3333 aa-1.53□□□□□ -2.65
PCM1-208ENST00000518877 OVOS2Q6IE36 1432 aa-1.53□□□□□ -2.65
PCM1-208ENST00000518877 V9GYH0 126 aa-1.53□□□□□ -2.65
PCM1-208ENST00000518877 IFT140Q96RY7 1462 aa-1.54□□□□□ -2.66
PCM1-208ENST00000518877 PRG4Q92954 1404 aaPredicted RBP-1.54□□□□□ -2.66
PCM1-208ENST00000518877 TRBV7-4A0A0J9YYF1 115 aa-1.54□□□□□ -2.66
PCM1-208ENST00000518877 SPAARA0A1B0GVQ0 90 aa-1.54□□□□□ -2.66
PCM1-208ENST00000518877 CPSF4LA6NMK7 179 aaKnown RBP-1.54□□□□□ -2.66
PCM1-208ENST00000518877 NEFHP12036 1026 aa-1.54□□□□□ -2.66
PCM1-208ENST00000518877 USMG5Q96IX5 58 aa-1.54□□□□□ -2.66
PCM1-208ENST00000518877 DNAH1Q9P2D7 4330 aa-1.54□□□□□ -2.66
PCM1-208ENST00000518877 ARAP2Q8WZ64 1704 aa-1.54□□□□□ -2.66
PCM1-208ENST00000518877 KIAA0556O60303 1618 aa-1.55□□□□□ -2.66
PCM1-208ENST00000518877 H0YGG7 62 aa-1.55□□□□□ -2.66
PCM1-208ENST00000518877 ALX1Q15699 326 aa-1.55□□□□□ -2.66
PCM1-208ENST00000518877 Q6AWC8 147 aa-1.55□□□□□ -2.66
PCM1-208ENST00000518877 SPANXCQ9NY87 97 aa-1.55□□□□□ -2.66
PCM1-208ENST00000518877 DMXL1Q9Y485 3027 aa-1.55□□□□□ -2.66
PCM1-208ENST00000518877 FMN2Q9NZ56 1722 aa-1.55□□□□□ -2.66
PCM1-208ENST00000518877 COL4A6Q14031 1691 aa-1.55□□□□□ -2.66
PCM1-208ENST00000518877 KIF21AQ7Z4S6 1674 aa-1.55□□□□□ -2.66
PCM1-208ENST00000518877 TULP4Q9NRJ4 1543 aa-1.56□□□□□ -2.66
PCM1-208ENST00000518877 ARHGEF12Q9NZN5 1544 aa-1.56□□□□□ -2.66
PCM1-208ENST00000518877 PATJQ8NI35 1801 aa-1.56□□□□□ -2.66
PCM1-208ENST00000518877 TRAV13-2A0A0B4J235 113 aa-1.56□□□□□ -2.66
PCM1-208ENST00000518877 BAGE2Q86Y30 109 aa-1.56□□□□□ -2.66
PCM1-208ENST00000518877 TTC9CQ8N5M4 171 aa-1.56□□□□□ -2.66
PCM1-208ENST00000518877 NAA60Q9H7X0 242 aa-1.56□□□□□ -2.66
PCM1-208ENST00000518877 LENEPQ9Y5L5 61 aa-1.56□□□□□ -2.66
PCM1-208ENST00000518877 ADAMTS12P58397 1594 aa-1.56□□□□□ -2.66
PCM1-208ENST00000518877 HMGXB3Q12766 1538 aa-1.56□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms