RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 TRBV10-3A0A0K0K1G6 114 aa1.85□□□□□ -2.11
VPS13B-207ENST00000518569 hADV29S1A0JD25 119 aa1.85□□□□□ -2.11
VPS13B-207ENST00000518569 H3BQ85 93 aa1.85□□□□□ -2.11
VPS13B-207ENST00000518569 SYS1-DBNDD2H3BUS1 97 aa1.85□□□□□ -2.11
VPS13B-207ENST00000518569 CCL16O15467 120 aa1.85□□□□□ -2.11
VPS13B-207ENST00000518569 BCE1O60756 84 aa1.85□□□□□ -2.11
VPS13B-207ENST00000518569 CXCL8P10145 99 aa1.85□□□□□ -2.11
VPS13B-207ENST00000518569 ADCYAP1P18509 176 aa1.85□□□□□ -2.11
VPS13B-207ENST00000518569 RBM3P98179 157 aaKnown RBP1.85□□□□□ -2.11
VPS13B-207ENST00000518569 INSL4Q14641 139 aa1.85□□□□□ -2.11
VPS13B-207ENST00000518569 ETDBQ3ZM63 59 aa1.85□□□□□ -2.11
VPS13B-207ENST00000518569 SPINT4Q6UDR6 99 aa1.85□□□□□ -2.11
VPS13B-207ENST00000518569 LINC00269Q8N2A0 174 aa1.85□□□□□ -2.11
VPS13B-207ENST00000518569 Q8N814 137 aa1.85□□□□□ -2.11
VPS13B-207ENST00000518569 Q8NDZ9 215 aa1.85□□□□□ -2.11
VPS13B-207ENST00000518569 CMTM2Q8TAZ6 248 aa1.85□□□□□ -2.11
VPS13B-207ENST00000518569 NUP210LQ5VU65 1888 aa1.85□□□□□ -2.11
VPS13B-207ENST00000518569 LCTP09848 1927 aa1.85□□□□□ -2.11
VPS13B-207ENST00000518569 DOCK4Q8N1I0 1966 aa1.85□□□□□ -2.11
VPS13B-207ENST00000518569 NUP205Q92621 2012 aa1.84□□□□□ -2.11
VPS13B-207ENST00000518569 PTPN13Q12923 2485 aa1.84□□□□□ -2.11
VPS13B-207ENST00000518569 DOPEY2Q9Y3R5 2298 aa1.84□□□□□ -2.11
VPS13B-207ENST00000518569 ATG2BQ96BY7 2078 aa1.84□□□□□ -2.11
VPS13B-207ENST00000518569 IGLV10-54A0A075B6I4 117 aa1.84□□□□□ -2.11
VPS13B-207ENST00000518569 TRAV17A0A0B4J275 112 aa1.84□□□□□ -2.11
VPS13B-207ENST00000518569 MDFIC2A0A1B0GVS7 189 aa1.84□□□□□ -2.11
VPS13B-207ENST00000518569 H3BUT2 72 aa1.84□□□□□ -2.11
VPS13B-207ENST00000518569 NUPR1O60356 82 aa1.84□□□□□ -2.11
VPS13B-207ENST00000518569 MGST1P10620 155 aaKnown RBP1.84□□□□□ -2.11
VPS13B-207ENST00000518569 DSCR4P56555 118 aaPredicted RBP1.84□□□□□ -2.11
VPS13B-207ENST00000518569 FAM27BQ5VT28 67 aa1.84□□□□□ -2.11
VPS13B-207ENST00000518569 C18orf32Q8TCD1 76 aa1.84□□□□□ -2.11
VPS13B-207ENST00000518569 KLF14Q8TD94 323 aaPredicted RBP1.84□□□□□ -2.11
VPS13B-207ENST00000518569 TIMM21Q9BVV7 248 aa1.84□□□□□ -2.11
VPS13B-207ENST00000518569 CXCL16Q9H2A7 254 aa1.84□□□□□ -2.11
VPS13B-207ENST00000518569 LINC00574Q9H8X3 128 aa1.84□□□□□ -2.11
VPS13B-207ENST00000518569 NDUFA12Q9UI09 145 aa1.84□□□□□ -2.11
VPS13B-207ENST00000518569 EML5Q05BV3 1969 aa1.84□□□□□ -2.11
VPS13B-207ENST00000518569 TSC2P49815 1807 aa1.84□□□□□ -2.12
VPS13B-207ENST00000518569 NUP214P35658 2090 aaPredicted RBP1.84□□□□□ -2.12
VPS13B-207ENST00000518569 ANKRD17O75179 2603 aaKnown RBP1.84□□□□□ -2.12
VPS13B-207ENST00000518569 CEP192Q8TEP8 1941 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 SPTAN1Q13813 2472 aaKnown RBP1.83□□□□□ -2.12
VPS13B-207ENST00000518569 MYH9P35579 1960 aaKnown RBP1.83□□□□□ -2.12
VPS13B-207ENST00000518569 MYO9AB2RTY4 2548 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 ABCA12Q86UK0 2595 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 RELNP78509 3460 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 IGHV3-64A0A075B6Q5 118 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 IGKV1OR2-108A0A075B7D4 117 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 IGKV2D-26A0A0A0MRZ7 120 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 TRAV13-2A0A0B4J235 113 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 IGHV1-18A0A0C4DH31 117 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 C7orf77A4D0Y5 90 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 C11orf86A6NJI1 115 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 C17orf98A8MV24 154 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 UMAD1C9J7I0 102 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 E7EUB6 86 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 F2Z2F3 143 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 ERC2-IT1O76042 136 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 COX6CP09669 75 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 ROMO1P60602 79 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 NMSQ5H8A3 153 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 S100A7L2Q5SY68 101 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 CYP2G1PQ6ZSU1 146 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 ZNF826PQ6ZT77 177 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 ADM2Q7Z4H4 148 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 NDUFA11Q86Y39 141 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 C1orf64Q8NEQ6 169 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 DYNLRB1Q9NP97 96 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 ATMQ13315 3056 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 ZNF638Q14966 1978 aaKnown RBP1.83□□□□□ -2.12
VPS13B-207ENST00000518569 MGAQ8IWI9 3026 aa1.83□□□□□ -2.12
VPS13B-207ENST00000518569 PI4KAP42356 2102 aa1.82□□□□□ -2.12
VPS13B-207ENST00000518569 OBSL1O75147 1896 aa1.82□□□□□ -2.12
VPS13B-207ENST00000518569 ACACAQ13085 2346 aa1.82□□□□□ -2.12
VPS13B-207ENST00000518569 PTPRBP23467 1997 aa1.82□□□□□ -2.12
VPS13B-207ENST00000518569 THADAQ6YHU6 1953 aa1.82□□□□□ -2.12
VPS13B-207ENST00000518569 IGKV1D-37A0A075B6S9 117 aa1.82□□□□□ -2.12
VPS13B-207ENST00000518569 A0A087WSZ3 146 aa1.82□□□□□ -2.12
VPS13B-207ENST00000518569 TRBV7-1A0A0A6YYK4 115 aa1.82□□□□□ -2.12
VPS13B-207ENST00000518569 TRAV1-1A0A0B4J248 108 aa1.82□□□□□ -2.12
VPS13B-207ENST00000518569 MUC21A0A140T8X8 626 aa1.82□□□□□ -2.12
VPS13B-207ENST00000518569 TCRBV4S1A1TA0A5B7 111 aa1.82□□□□□ -2.12
VPS13B-207ENST00000518569 PSCAO43653 123 aa1.82□□□□□ -2.12
VPS13B-207ENST00000518569 SMIM13P0DJ93 91 aa1.82□□□□□ -2.12
VPS13B-207ENST00000518569 MIFP14174 115 aa1.82□□□□□ -2.12
VPS13B-207ENST00000518569 NNATQ16517 81 aa1.82□□□□□ -2.12
VPS13B-207ENST00000518569 C9orf116Q5BN46 136 aaPredicted RBP1.82□□□□□ -2.12
VPS13B-207ENST00000518569 TMEM170BQ5T4T1 132 aa1.82□□□□□ -2.12
VPS13B-207ENST00000518569 Q6ZQT0 140 aa1.82□□□□□ -2.12
VPS13B-207ENST00000518569 LINC00643Q86TS7 51 aa1.82□□□□□ -2.12
VPS13B-207ENST00000518569 Q8IYB0 196 aa1.82□□□□□ -2.12
VPS13B-207ENST00000518569 LINC00304Q8N9R0 145 aa1.82□□□□□ -2.12
VPS13B-207ENST00000518569 C2CD3Q4AC94 2353 aa1.82□□□□□ -2.12
VPS13B-207ENST00000518569 CRYBG3Q68DQ2 2970 aa1.81□□□□□ -2.12
VPS13B-207ENST00000518569 DSCAML1Q8TD84 2053 aa1.81□□□□□ -2.12
VPS13B-207ENST00000518569 CACNA1DQ01668 2161 aa1.81□□□□□ -2.12
VPS13B-207ENST00000518569 CENPEQ02224 2701 aa1.81□□□□□ -2.12
VPS13B-207ENST00000518569 TRAV23DV6A0A075B6W5 121 aa1.81□□□□□ -2.12
VPS13B-207ENST00000518569 SIX6O95475 246 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms