RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 Q6ZTI0 123 aa1.5□□□□□ -2.17
CPNE3-204ENST00000517862 LHFPL1Q86WI0 220 aa1.5□□□□□ -2.17
CPNE3-204ENST00000517862 OR13C6PQ8NH95 151 aa1.5□□□□□ -2.17
CPNE3-204ENST00000517862 TMEM263Q8WUH6 116 aaKnown RBP1.5□□□□□ -2.17
CPNE3-204ENST00000517862 TVP23CQ96ET8 276 aa1.5□□□□□ -2.17
CPNE3-204ENST00000517862 GINS3Q9BRX5 216 aa1.5□□□□□ -2.17
CPNE3-204ENST00000517862 PRNDQ9UKY0 176 aa1.5□□□□□ -2.17
CPNE3-204ENST00000517862 UBE2D4Q9Y2X8 147 aa1.5□□□□□ -2.17
CPNE3-204ENST00000517862 ZNF73O43830 326 aaPredicted RBP1.49□□□□□ -2.17
CPNE3-204ENST00000517862 CYB5AP00167 134 aa1.49□□□□□ -2.17
CPNE3-204ENST00000517862 CD14P08571 375 aa1.49□□□□□ -2.17
CPNE3-204ENST00000517862 P0C880 135 aa1.49□□□□□ -2.17
CPNE3-204ENST00000517862 EIF5AP63241 154 aaKnown RBP1.49□□□□□ -2.17
CPNE3-204ENST00000517862 SUPT4H1P63272 117 aaKnown RBP1.49□□□□□ -2.17
CPNE3-204ENST00000517862 MORN2Q502X0 79 aa1.49□□□□□ -2.17
CPNE3-204ENST00000517862 RPL39P5Q59GN2 51 aa1.49□□□□□ -2.17
CPNE3-204ENST00000517862 C10orf55Q5SWW7 151 aa1.49□□□□□ -2.17
CPNE3-204ENST00000517862 STX19Q8N4C7 294 aa1.49□□□□□ -2.17
CPNE3-204ENST00000517862 ZNF471Q9BX82 626 aaPredicted RBP1.49□□□□□ -2.17
CPNE3-204ENST00000517862 C20orf27Q9GZN8 174 aa1.49□□□□□ -2.17
CPNE3-204ENST00000517862 XAGE1AQ9HD64 81 aa1.49□□□□□ -2.17
CPNE3-204ENST00000517862 TIMM9Q9Y5J7 89 aa1.49□□□□□ -2.17
CPNE3-204ENST00000517862 TRAV7A0A075B6U4 112 aa1.48□□□□□ -2.17
CPNE3-204ENST00000517862 TRAV4A0A0B4J268 109 aa1.48□□□□□ -2.17
CPNE3-204ENST00000517862 G3V2T6 193 aa1.48□□□□□ -2.17
CPNE3-204ENST00000517862 ORC5O43913 435 aa1.48□□□□□ -2.17
CPNE3-204ENST00000517862 HINT1P49773 126 aaPredicted RBP1.48□□□□□ -2.17
CPNE3-204ENST00000517862 PIGPP57054 158 aa1.48□□□□□ -2.17
CPNE3-204ENST00000517862 RBM3P98179 157 aaKnown RBP1.48□□□□□ -2.17
CPNE3-204ENST00000517862 AKR1C8PQ5T2L2 129 aa1.48□□□□□ -2.17
CPNE3-204ENST00000517862 LYZL1Q6UWQ5 148 aa1.48□□□□□ -2.17
CPNE3-204ENST00000517862 FOXI2Q6ZQN5 318 aa1.48□□□□□ -2.17
CPNE3-204ENST00000517862 SMIM15Q7Z3B0 74 aa1.48□□□□□ -2.17
CPNE3-204ENST00000517862 AKAP14Q86UN6 197 aa1.48□□□□□ -2.17
CPNE3-204ENST00000517862 C20orf166-AS1Q96NR2 134 aa1.48□□□□□ -2.17
CPNE3-204ENST00000517862 SLC39A9Q9NUM3 307 aa1.48□□□□□ -2.17
CPNE3-204ENST00000517862 H7C2G1 150 aa1.47□□□□□ -2.17
CPNE3-204ENST00000517862 M0R2Z0 102 aa1.47□□□□□ -2.17
CPNE3-204ENST00000517862 NDUFC2O95298 119 aa1.47□□□□□ -2.17
CPNE3-204ENST00000517862 UCHL1P09936 223 aa1.47□□□□□ -2.17
CPNE3-204ENST00000517862 IDO1P14902 403 aa1.47□□□□□ -2.17
CPNE3-204ENST00000517862 SPINK13Q1W4C9 94 aa1.47□□□□□ -2.17
CPNE3-204ENST00000517862 KLK9Q2XQG4 91 aa1.47□□□□□ -2.17
CPNE3-204ENST00000517862 Q56UQ5 140 aa1.47□□□□□ -2.17
CPNE3-204ENST00000517862 IDO2Q6ZQW0 420 aa1.47□□□□□ -2.17
CPNE3-204ENST00000517862 LCA10Q71F78 164 aa1.47□□□□□ -2.17
CPNE3-204ENST00000517862 Q8NDZ9 215 aa1.47□□□□□ -2.17
CPNE3-204ENST00000517862 OR10J5Q8NHC4 309 aa1.47□□□□□ -2.17
CPNE3-204ENST00000517862 TERB2Q8NHR7 220 aa1.47□□□□□ -2.17
CPNE3-204ENST00000517862 GPR146Q96CH1 333 aa1.47□□□□□ -2.17
CPNE3-204ENST00000517862 LINC00052Q96N35 136 aa1.47□□□□□ -2.17
CPNE3-204ENST00000517862 PBDC1Q9BVG4 233 aa1.47□□□□□ -2.17
CPNE3-204ENST00000517862 MRPL32Q9BYC8 188 aaKnown RBP1.47□□□□□ -2.17
CPNE3-204ENST00000517862 BIN3Q9NQY0 253 aa1.47□□□□□ -2.17
CPNE3-204ENST00000517862 KLK9Q9UKQ9 250 aa1.47□□□□□ -2.17
CPNE3-204ENST00000517862 SSR3Q9UNL2 185 aa1.47□□□□□ -2.17
CPNE3-204ENST00000517862 MED31Q9Y3C7 131 aa1.47□□□□□ -2.17
CPNE3-204ENST00000517862 TRAV12-2A0A075B6T6 113 aa1.46□□□□□ -2.18
CPNE3-204ENST00000517862 TMSB15BA0A087X1C1 80 aa1.46□□□□□ -2.18
CPNE3-204ENST00000517862 A0A096LNI7 61 aa1.46□□□□□ -2.18
CPNE3-204ENST00000517862 MUC21A0A140T8X8 626 aa1.46□□□□□ -2.18
CPNE3-204ENST00000517862 A0A1B0GV72 72 aa1.46□□□□□ -2.18
CPNE3-204ENST00000517862 TMEM30CPA0ZSE6 113 aa1.46□□□□□ -2.18
CPNE3-204ENST00000517862 IRGMA1A4Y4 181 aa1.46□□□□□ -2.18
CPNE3-204ENST00000517862 A6NIN4 97 aa1.46□□□□□ -2.18
CPNE3-204ENST00000517862 C5orf58C9J3I9 102 aa1.46□□□□□ -2.18
CPNE3-204ENST00000517862 GPR31O00270 319 aa1.46□□□□□ -2.18
CPNE3-204ENST00000517862 APOA2P02652 100 aa1.46□□□□□ -2.18
CPNE3-204ENST00000517862 HTR1AP08908 422 aa1.46□□□□□ -2.18
CPNE3-204ENST00000517862 SPI1P17947 270 aa1.46□□□□□ -2.18
CPNE3-204ENST00000517862 S100A4P26447 101 aaKnown RBP1.46□□□□□ -2.18
CPNE3-204ENST00000517862 G6PCP35575 357 aa1.46□□□□□ -2.18
CPNE3-204ENST00000517862 HIST1H4AP62805 103 aaKnown RBP1.46□□□□□ -2.18
CPNE3-204ENST00000517862 LINC01554Q52M75 96 aa1.46□□□□□ -2.18
CPNE3-204ENST00000517862 DYDC1Q8WWB3 177 aa1.46□□□□□ -2.18
CPNE3-204ENST00000517862 GINS4Q9BRT9 223 aa1.46□□□□□ -2.18
CPNE3-204ENST00000517862 MIXL1Q9H2W2 232 aa1.46□□□□□ -2.18
CPNE3-204ENST00000517862 TRBV19A0A075B6N1 114 aa1.45□□□□□ -2.18
CPNE3-204ENST00000517862 TRGV1A0A0A0MS02 117 aa1.45□□□□□ -2.18
CPNE3-204ENST00000517862 TRGV4A0A0C4DH28 118 aa1.45□□□□□ -2.18
CPNE3-204ENST00000517862 A0A0G2JQZ4 141 aa1.45□□□□□ -2.18
CPNE3-204ENST00000517862 CYB5BO43169 146 aa1.45□□□□□ -2.18
CPNE3-204ENST00000517862 PGLYRP1O75594 196 aaPredicted RBP1.45□□□□□ -2.18
CPNE3-204ENST00000517862 LINC00032P0C843 101 aa1.45□□□□□ -2.18
CPNE3-204ENST00000517862 IFI30P13284 250 aa1.45□□□□□ -2.18
CPNE3-204ENST00000517862 AQP4P55087 323 aa1.45□□□□□ -2.18
CPNE3-204ENST00000517862 ERHP84090 104 aaKnown RBP1.45□□□□□ -2.18
CPNE3-204ENST00000517862 VMA21Q3ZAQ7 101 aa1.45□□□□□ -2.18
CPNE3-204ENST00000517862 LYRM7Q5U5X0 104 aa1.45□□□□□ -2.18
CPNE3-204ENST00000517862 TOMM20LQ6UXN7 152 aa1.45□□□□□ -2.18
CPNE3-204ENST00000517862 MIR17HGQ75NE6 70 aa1.45□□□□□ -2.18
CPNE3-204ENST00000517862 HIST3H2BBQ8N257 126 aa1.45□□□□□ -2.18
CPNE3-204ENST00000517862 OR5A1Q8NGJ0 315 aa1.45□□□□□ -2.18
CPNE3-204ENST00000517862 SCGB3A1Q96QR1 104 aa1.45□□□□□ -2.18
CPNE3-204ENST00000517862 SH3BGRL3Q9H299 93 aa1.45□□□□□ -2.18
CPNE3-204ENST00000517862 OSTCQ9NRP0 149 aa1.45□□□□□ -2.18
CPNE3-204ENST00000517862 LYRM2Q9NU23 88 aaPredicted RBP1.45□□□□□ -2.18
CPNE3-204ENST00000517862 NDUFB11Q9NX14 153 aa1.45□□□□□ -2.18
CPNE3-204ENST00000517862 LINC00474Q9P2X8 69 aa1.45□□□□□ -2.18
CPNE3-204ENST00000517862 IER3IP1Q9Y5U9 82 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms