RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 C4orf3Q8WVX3 66 aa8.12□□□□□ -1.11
PCDHGA1-202ENST00000517417 TMEM126AQ9H061 195 aa8.12□□□□□ -1.11
PCDHGA1-202ENST00000517417 TMEM89A2RUT3 159 aa8.12□□□□□ -1.11
PCDHGA1-202ENST00000517417 MED14OSP0DP75 135 aa8.12□□□□□ -1.11
PCDHGA1-202ENST00000517417 DAZ2Q13117 558 aaKnown RBP8.12□□□□□ -1.11
PCDHGA1-202ENST00000517417 DAZ4Q86SG3 579 aaKnown RBP8.12□□□□□ -1.11
PCDHGA1-202ENST00000517417 DAZ3Q9NR90 486 aaKnown RBP8.12□□□□□ -1.11
PCDHGA1-202ENST00000517417 ZZEF1O43149 2961 aa8.12□□□□□ -1.11
PCDHGA1-202ENST00000517417 MRPL23Q16540 153 aaKnown RBP8.12□□□□□ -1.11
PCDHGA1-202ENST00000517417 Q6ZUT4 128 aa8.12□□□□□ -1.11
PCDHGA1-202ENST00000517417 MAP6D1Q9H9H5 199 aa8.12□□□□□ -1.11
PCDHGA1-202ENST00000517417 TIMM17AQ99595 171 aa8.11□□□□□ -1.11
PCDHGA1-202ENST00000517417 IGLV2-18A0A075B6J9 118 aa8.11□□□□□ -1.11
PCDHGA1-202ENST00000517417 ZFAND2AQ8N6M9 145 aa8.11□□□□□ -1.11
PCDHGA1-202ENST00000517417 BSNQ9UPA5 3926 aa8.11□□□□□ -1.11
PCDHGA1-202ENST00000517417 IGHV4-4A0A075B6R2 117 aa8.11□□□□□ -1.11
PCDHGA1-202ENST00000517417 IGHV4-31P0DP07 118 aa8.11□□□□□ -1.11
PCDHGA1-202ENST00000517417 C20orf203Q8NBC4 194 aa8.11□□□□□ -1.11
PCDHGA1-202ENST00000517417 C1orf43Q9BWL3 253 aa8.11□□□□□ -1.11
PCDHGA1-202ENST00000517417 KALRNO60229 2985 aa8.1□□□□□ -1.11
PCDHGA1-202ENST00000517417 CFAP126Q5VTH2 177 aa8.1□□□□□ -1.11
PCDHGA1-202ENST00000517417 SND1-IT1Q9HBX3 110 aa8.1□□□□□ -1.11
PCDHGA1-202ENST00000517417 Q6ZTI0 123 aa8.1□□□□□ -1.11
PCDHGA1-202ENST00000517417 K7EQG2 157 aa8.09□□□□□ -1.11
PCDHGA1-202ENST00000517417 Q6ZS46 218 aa8.09□□□□□ -1.11
PCDHGA1-202ENST00000517417 VSIG2Q96IQ7 327 aa8.09□□□□□ -1.11
PCDHGA1-202ENST00000517417 BAALC-AS2P0C853 105 aa8.09□□□□□ -1.11
PCDHGA1-202ENST00000517417 Q6YL49 198 aa8.09□□□□□ -1.11
PCDHGA1-202ENST00000517417 COX7A2LO14548 114 aa8.09□□□□□ -1.12
PCDHGA1-202ENST00000517417 IFITM1P13164 125 aa8.09□□□□□ -1.12
PCDHGA1-202ENST00000517417 UBL5Q9BZL1 73 aa8.09□□□□□ -1.12
PCDHGA1-202ENST00000517417 C15orf53Q8NAA6 179 aa8.08□□□□□ -1.12
PCDHGA1-202ENST00000517417 LINC01620Q4KN68 170 aa8.08□□□□□ -1.12
PCDHGA1-202ENST00000517417 PSMG3-AS1Q96PY0 264 aa8.08□□□□□ -1.12
PCDHGA1-202ENST00000517417 CAMK2N2Q96S95 79 aa8.08□□□□□ -1.12
PCDHGA1-202ENST00000517417 KLK12Q9UKR0 248 aa8.08□□□□□ -1.12
PCDHGA1-202ENST00000517417 ICOSQ9Y6W8 199 aa8.08□□□□□ -1.12
PCDHGA1-202ENST00000517417 DEFB105AQ8NG35 78 aa8.07□□□□□ -1.12
PCDHGA1-202ENST00000517417 TMEM263Q8WUH6 116 aaKnown RBP8.07□□□□□ -1.12
PCDHGA1-202ENST00000517417 RNF183Q96D59 192 aa8.07□□□□□ -1.12
PCDHGA1-202ENST00000517417 AGRNO00468 2067 aa8.07□□□□□ -1.12
PCDHGA1-202ENST00000517417 DEFB114Q30KQ6 69 aa8.07□□□□□ -1.12
PCDHGA1-202ENST00000517417 LINC01546A6NGU7 62 aa8.07□□□□□ -1.12
PCDHGA1-202ENST00000517417 CDK2AP2O75956 126 aa8.06□□□□□ -1.12
PCDHGA1-202ENST00000517417 COX7B2Q8TF08 81 aa8.06□□□□□ -1.12
PCDHGA1-202ENST00000517417 RMI2Q96E14 147 aa8.06□□□□□ -1.12
PCDHGA1-202ENST00000517417 DSCR8Q96T75 97 aa8.06□□□□□ -1.12
PCDHGA1-202ENST00000517417 RNASE3P12724 160 aaKnown RBP8.06□□□□□ -1.12
PCDHGA1-202ENST00000517417 Q6ZSV7 163 aa8.06□□□□□ -1.12
PCDHGA1-202ENST00000517417 XGP55808 180 aa8.05□□□□□ -1.12
PCDHGA1-202ENST00000517417 INAFM1C9JVW0 142 aa8.05□□□□□ -1.12
PCDHGA1-202ENST00000517417 PRO0255Q9UI72 69 aa8.05□□□□□ -1.12
PCDHGA1-202ENST00000517417 F8P00451 2351 aa8.05□□□□□ -1.12
PCDHGA1-202ENST00000517417 PRM2P04554 102 aa8.04□□□□□ -1.12
PCDHGA1-202ENST00000517417 UBE2BP63146 152 aa8.04□□□□□ -1.12
PCDHGA1-202ENST00000517417 AVPP01185 164 aa8.04□□□□□ -1.12
PCDHGA1-202ENST00000517417 RPL18AQ02543 176 aaKnown RBP8.04□□□□□ -1.12
PCDHGA1-202ENST00000517417 CCL18P55774 89 aa8.04□□□□□ -1.12
PCDHGA1-202ENST00000517417 PROK1P58294 105 aa8.04□□□□□ -1.12
PCDHGA1-202ENST00000517417 MIR7-3HGQ8N6C7 128 aa8.04□□□□□ -1.12
PCDHGA1-202ENST00000517417 C9orf153Q5TBE3 101 aa8.04□□□□□ -1.12
PCDHGA1-202ENST00000517417 UBE2D1P51668 147 aa8.03□□□□□ -1.12
PCDHGA1-202ENST00000517417 IGHV1-58A0A0C4DH39 117 aa8.03□□□□□ -1.12
PCDHGA1-202ENST00000517417 A0A1W2PPR1 153 aa8.03□□□□□ -1.12
PCDHGA1-202ENST00000517417 TRBV10-2A0A0K0K1G8 114 aa8.02□□□□□ -1.12
PCDHGA1-202ENST00000517417 LGALS9O00182 355 aa8.02□□□□□ -1.12
PCDHGA1-202ENST00000517417 A0A0B4J2C4 111 aa8.02□□□□□ -1.13
PCDHGA1-202ENST00000517417 TRBV10-1A0A0K0K1A3 114 aa8.02□□□□□ -1.13
PCDHGA1-202ENST00000517417 C18orf65Q6ZTR6 163 aa8.02□□□□□ -1.13
PCDHGA1-202ENST00000517417 LINC00482Q8N8I6 264 aa8.02□□□□□ -1.13
PCDHGA1-202ENST00000517417 CLEC2BQ92478 149 aa8.02□□□□□ -1.13
PCDHGA1-202ENST00000517417 ORMDL1Q9P0S3 153 aa8.02□□□□□ -1.13
PCDHGA1-202ENST00000517417 TMEM223A0PJW6 202 aa8.02□□□□□ -1.13
PCDHGA1-202ENST00000517417 ZNF22P17026 224 aaPredicted RBP8.02□□□□□ -1.13
PCDHGA1-202ENST00000517417 A0A0J9YXY3 114 aa8.02□□□□□ -1.13
PCDHGA1-202ENST00000517417 PSMB8P28062 276 aa8.02□□□□□ -1.13
PCDHGA1-202ENST00000517417 FAM222AQ5U5X8 452 aa8.02□□□□□ -1.13
PCDHGA1-202ENST00000517417 NFE4Q86UQ8 179 aa8.02□□□□□ -1.13
PCDHGA1-202ENST00000517417 CDKN2A-AS1Q9UH64 79 aa8.02□□□□□ -1.13
PCDHGA1-202ENST00000517417 IGLV4-69A0A075B6H9 119 aa8.01□□□□□ -1.13
PCDHGA1-202ENST00000517417 POLR2KP53803 58 aaKnown RBP8.01□□□□□ -1.13
PCDHGA1-202ENST00000517417 SPAG11BQ08648 103 aa8.01□□□□□ -1.13
PCDHGA1-202ENST00000517417 LINC00467Q9BRT7 94 aa8.01□□□□□ -1.13
PCDHGA1-202ENST00000517417 TEX49A0A1B0GTD5 131 aa8.01□□□□□ -1.13
PCDHGA1-202ENST00000517417 IGIPA6NJ69 53 aa8.01□□□□□ -1.13
PCDHGA1-202ENST00000517417 RPL32P62910 135 aaKnown RBP8.01□□□□□ -1.13
PCDHGA1-202ENST00000517417 TSPEAR-AS2P59090 65 aa8.01□□□□□ -1.13
PCDHGA1-202ENST00000517417 LRBAP50851 2863 aa8.01□□□□□ -1.13
PCDHGA1-202ENST00000517417 USP24Q9UPU5 2620 aa8□□□□□ -1.13
PCDHGA1-202ENST00000517417 UBE2D3P61077 147 aa8□□□□□ -1.13
PCDHGA1-202ENST00000517417 UBE2D2P62837 147 aa8□□□□□ -1.13
PCDHGA1-202ENST00000517417 ANKRD17O75179 2603 aaKnown RBP8□□□□□ -1.13
PCDHGA1-202ENST00000517417 TRBV27A0A0K0K1C4 114 aa8□□□□□ -1.13
PCDHGA1-202ENST00000517417 LECT2O14960 151 aa8□□□□□ -1.13
PCDHGA1-202ENST00000517417 WFDC10AQ9H1F0 79 aa8□□□□□ -1.13
PCDHGA1-202ENST00000517417 CENPEQ02224 2701 aa8□□□□□ -1.13
PCDHGA1-202ENST00000517417 M0QY20 66 aa7.99□□□□□ -1.13
PCDHGA1-202ENST00000517417 PRO0461Q9UI25 63 aa7.99□□□□□ -1.13
PCDHGA1-202ENST00000517417 IGLV4-3A0A075B6K6 122 aa7.99□□□□□ -1.13
PCDHGA1-202ENST00000517417 hADV29S1A0JD25 119 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms