RNA–Protein interactions for RNA: ENST00000517391.5

CPNE3-202, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 785 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-202ENST00000517391 ACOT6Q3I5F7 207 aaPredicted RBP3.03□□□□□ -1.92
CPNE3-202ENST00000517391 FAM78BQ5VT40 261 aa3.03□□□□□ -1.92
CPNE3-202ENST00000517391 IGFL1Q6UW32 110 aa3.03□□□□□ -1.92
CPNE3-202ENST00000517391 LCN15Q6UWW0 184 aa3.03□□□□□ -1.92
CPNE3-202ENST00000517391 IGF2BP2-AS1Q96M15 143 aa3.03□□□□□ -1.92
CPNE3-202ENST00000517391 SLC50A1Q9BRV3 221 aa3.03□□□□□ -1.92
CPNE3-202ENST00000517391 GSKIPQ9P0R6 139 aa3.03□□□□□ -1.92
CPNE3-202ENST00000517391 APLNQ9ULZ1 77 aa3.03□□□□□ -1.92
CPNE3-202ENST00000517391 URGCP-MRPS24S4R325 110 aa3.03□□□□□ -1.92
CPNE3-202ENST00000517391 A0A1B0GV72 72 aa3.02□□□□□ -1.93
CPNE3-202ENST00000517391 C20orf202A1L168 122 aa3.02□□□□□ -1.93
CPNE3-202ENST00000517391 TMEM238C9JI98 176 aa3.02□□□□□ -1.93
CPNE3-202ENST00000517391 H3BQ15 152 aa3.02□□□□□ -1.93
CPNE3-202ENST00000517391 HMGB3O15347 200 aaKnown RBP3.02□□□□□ -1.93
CPNE3-202ENST00000517391 TRGC2P03986 189 aa3.02□□□□□ -1.93
CPNE3-202ENST00000517391 TYMSP04818 313 aa3.02□□□□□ -1.93
CPNE3-202ENST00000517391 NBEAP1P0C6P0 100 aa3.02□□□□□ -1.93
CPNE3-202ENST00000517391 SCGB1C2P0DMR2 95 aa3.02□□□□□ -1.93
CPNE3-202ENST00000517391 G0S2P27469 103 aa3.02□□□□□ -1.93
CPNE3-202ENST00000517391 RPL12P30050 165 aaKnown RBP3.02□□□□□ -1.93
CPNE3-202ENST00000517391 C12orf74Q32Q52 190 aa3.02□□□□□ -1.93
CPNE3-202ENST00000517391 COL5A1-AS1Q5SY13 56 aa3.02□□□□□ -1.93
CPNE3-202ENST00000517391 GDF5OSQ5U4N7 250 aa3.02□□□□□ -1.93
CPNE3-202ENST00000517391 RPL7L1Q6DKI1 246 aaKnown RBP3.02□□□□□ -1.93
CPNE3-202ENST00000517391 SPINT4Q6UDR6 99 aa3.02□□□□□ -1.93
CPNE3-202ENST00000517391 AMTNQ6UX39 209 aa3.02□□□□□ -1.93
CPNE3-202ENST00000517391 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.02□□□□□ -1.93
CPNE3-202ENST00000517391 BPIFA4PQ86YQ2 179 aa3.02□□□□□ -1.93
CPNE3-202ENST00000517391 SCGB1C1Q8TD33 95 aa3.02□□□□□ -1.93
CPNE3-202ENST00000517391 MIEN1Q9BRT3 115 aa3.02□□□□□ -1.93
CPNE3-202ENST00000517391 EIF5A2Q9GZV4 153 aaKnown RBP3.02□□□□□ -1.93
CPNE3-202ENST00000517391 KCNIP2Q9NS61 270 aa3.02□□□□□ -1.93
CPNE3-202ENST00000517391 LYRM2Q9NU23 88 aaPredicted RBP3.02□□□□□ -1.93
CPNE3-202ENST00000517391 NAGKQ9UJ70 344 aa3.02□□□□□ -1.93
CPNE3-202ENST00000517391 PXMP4Q9Y6I8 212 aa3.02□□□□□ -1.93
CPNE3-202ENST00000517391 SACSQ9NZJ4 4579 aa3.02□□□□□ -1.93
CPNE3-202ENST00000517391 DNAH1Q9P2D7 4330 aa3.02□□□□□ -1.93
CPNE3-202ENST00000517391 MUC4Q99102 2169 aa3.01□□□□□ -1.93
CPNE3-202ENST00000517391 RYR2Q92736 4967 aa3.01□□□□□ -1.93
CPNE3-202ENST00000517391 TRAV8-2A0A0B4J237 113 aa3.01□□□□□ -1.93
CPNE3-202ENST00000517391 K7ERU9 68 aa3.01□□□□□ -1.93
CPNE3-202ENST00000517391 SRP19P09132 144 aaKnown RBP3.01□□□□□ -1.93
CPNE3-202ENST00000517391 CXCL1P09341 107 aa3.01□□□□□ -1.93
CPNE3-202ENST00000517391 ESDP10768 282 aa3.01□□□□□ -1.93
CPNE3-202ENST00000517391 EMP1P54849 157 aa3.01□□□□□ -1.93
CPNE3-202ENST00000517391 DAD1P61803 113 aa3.01□□□□□ -1.93
CPNE3-202ENST00000517391 SLC38A11Q08AI6 406 aa3.01□□□□□ -1.93
CPNE3-202ENST00000517391 C10orf113Q5VZT2 155 aa3.01□□□□□ -1.93
CPNE3-202ENST00000517391 LINC00305Q7Z4B0 112 aa3.01□□□□□ -1.93
CPNE3-202ENST00000517391 DAZ4Q86SG3 579 aaKnown RBP3.01□□□□□ -1.93
CPNE3-202ENST00000517391 RPP25LQ8N5L8 163 aaKnown RBP3.01□□□□□ -1.93
CPNE3-202ENST00000517391 C15orf53Q8NAA6 179 aa3.01□□□□□ -1.93
CPNE3-202ENST00000517391 GNPNAT1Q96EK6 184 aaPredicted RBP3.01□□□□□ -1.93
CPNE3-202ENST00000517391 ODF3Q96PU9 254 aa3.01□□□□□ -1.93
CPNE3-202ENST00000517391 PRO1933Q9H354 126 aa3.01□□□□□ -1.93
CPNE3-202ENST00000517391 ALMS1Q8TCU4 4167 aa3.01□□□□□ -1.93
CPNE3-202ENST00000517391 C16orf90A8MZG2 172 aa3□□□□□ -1.93
CPNE3-202ENST00000517391 F6UZH7 168 aa3□□□□□ -1.93
CPNE3-202ENST00000517391 H7BYZ3 331 aa3□□□□□ -1.93
CPNE3-202ENST00000517391 M0R2Z0 102 aa3□□□□□ -1.93
CPNE3-202ENST00000517391 CST7O76096 145 aa3□□□□□ -1.93
CPNE3-202ENST00000517391 IGLC2P0DOY2 106 aa3□□□□□ -1.93
CPNE3-202ENST00000517391 AKR1C3P42330 323 aa3□□□□□ -1.93
CPNE3-202ENST00000517391 FXYD7P58549 80 aa3□□□□□ -1.93
CPNE3-202ENST00000517391 DEFB1P60022 68 aa3□□□□□ -1.93
CPNE3-202ENST00000517391 RHOBP62745 196 aa3□□□□□ -1.93
CPNE3-202ENST00000517391 HIST1H1AQ02539 215 aaPredicted RBP3□□□□□ -1.93
CPNE3-202ENST00000517391 PDE6HQ13956 83 aa3□□□□□ -1.93
CPNE3-202ENST00000517391 SPINK13Q1W4C9 94 aa3□□□□□ -1.93
CPNE3-202ENST00000517391 LGALS9BQ3B8N2 356 aa3□□□□□ -1.93
CPNE3-202ENST00000517391 OR10J3Q5JRS4 329 aa3□□□□□ -1.93
CPNE3-202ENST00000517391 PATE2Q6UY27 113 aa3□□□□□ -1.93
CPNE3-202ENST00000517391 UBE2DNLQ8IWF7 75 aa3□□□□□ -1.93
CPNE3-202ENST00000517391 C1orf158Q8N1D5 194 aa3□□□□□ -1.93
CPNE3-202ENST00000517391 TMEM263Q8WUH6 116 aaKnown RBP3□□□□□ -1.93
CPNE3-202ENST00000517391 MRAP2Q96G30 205 aa3□□□□□ -1.93
CPNE3-202ENST00000517391 LINC01587Q99440 93 aa3□□□□□ -1.93
CPNE3-202ENST00000517391 MGST2Q99735 147 aa3□□□□□ -1.93
CPNE3-202ENST00000517391 ANAPC13Q9BS18 74 aa3□□□□□ -1.93
CPNE3-202ENST00000517391 SLC39A9Q9NUM3 307 aa3□□□□□ -1.93
CPNE3-202ENST00000517391 TMEM14CQ9P0S9 112 aa3□□□□□ -1.93
CPNE3-202ENST00000517391 RBM12B-AS1Q9P1G2 102 aa3□□□□□ -1.93
CPNE3-202ENST00000517391 LSM5Q9Y4Y9 91 aaKnown RBP3□□□□□ -1.93
CPNE3-202ENST00000517391 TRAV9-1A0A075B6T8 112 aa2.99□□□□□ -1.93
CPNE3-202ENST00000517391 TRAV8-3A0A0A6YYJ7 113 aa2.99□□□□□ -1.93
CPNE3-202ENST00000517391 TGIF2-C20orf24A0A0A6YYL0 155 aa2.99□□□□□ -1.93
CPNE3-202ENST00000517391 UBE2L5PA0A1B0GUS4 154 aa2.99□□□□□ -1.93
CPNE3-202ENST00000517391 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.99□□□□□ -1.93
CPNE3-202ENST00000517391 ATP5G1P05496 136 aa2.99□□□□□ -1.93
CPNE3-202ENST00000517391 PFN1P07737 140 aaKnown RBP2.99□□□□□ -1.93
CPNE3-202ENST00000517391 HIST1H1EP10412 219 aaKnown RBP2.99□□□□□ -1.93
CPNE3-202ENST00000517391 ATP5G3P48201 142 aa2.99□□□□□ -1.93
CPNE3-202ENST00000517391 CDC34P49427 236 aaPredicted RBP2.99□□□□□ -1.93
CPNE3-202ENST00000517391 UBE2G2P60604 165 aa2.99□□□□□ -1.93
CPNE3-202ENST00000517391 S100A10P60903 97 aa2.99□□□□□ -1.93
CPNE3-202ENST00000517391 RPL19P84098 196 aaKnown RBP2.99□□□□□ -1.93
CPNE3-202ENST00000517391 KRTAP13-2Q52LG2 175 aa2.99□□□□□ -1.93
CPNE3-202ENST00000517391 MBD3L1Q8WWY6 194 aa2.99□□□□□ -1.93
CPNE3-202ENST00000517391 C11orf1Q9H5F2 150 aa2.99□□□□□ -1.93
CPNE3-202ENST00000517391 TIMM8BQ9Y5J9 83 aaPredicted RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms