RNA–Protein interactions for RNA: ENST00000517181.1

RNU1-54P-201, Transcript of RNA, U1 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU1-54P, Length 120 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-54P-201ENST00000517181 C9orf62Q8N4C0 152 aa-1.75□□□□□ -2.69
RNU1-54P-201ENST00000517181 APLNQ9ULZ1 77 aa-1.75□□□□□ -2.69
RNU1-54P-201ENST00000517181 NSD3Q9BZ95 1437 aa-1.75□□□□□ -2.69
RNU1-54P-201ENST00000517181 H3BNG1 76 aa-1.76□□□□□ -2.69
RNU1-54P-201ENST00000517181 TFAMQ00059 246 aaKnown RBP-1.76□□□□□ -2.69
RNU1-54P-201ENST00000517181 MAGOHBQ96A72 148 aaKnown RBP-1.76□□□□□ -2.69
RNU1-54P-201ENST00000517181 TROQ12816 1431 aaPredicted RBP-1.76□□□□□ -2.69
RNU1-54P-201ENST00000517181 TRBV20-1A0A075B6N2 111 aa-1.77□□□□□ -2.69
RNU1-54P-201ENST00000517181 TRAV36DV7A0A075B6V5 113 aa-1.77□□□□□ -2.69
RNU1-54P-201ENST00000517181 SMIM6P0DI80 62 aa-1.77□□□□□ -2.69
RNU1-54P-201ENST00000517181 SPANXN1Q5VSR9 72 aa-1.77□□□□□ -2.69
RNU1-54P-201ENST00000517181 PPP1R2P3Q6NXS1 205 aa-1.77□□□□□ -2.69
RNU1-54P-201ENST00000517181 VSTM2AQ8TAG5 236 aa-1.77□□□□□ -2.69
RNU1-54P-201ENST00000517181 RPRMQ9NS64 109 aa-1.77□□□□□ -2.69
RNU1-54P-201ENST00000517181 FRYQ5TBA9 3013 aa-1.77□□□□□ -2.69
RNU1-54P-201ENST00000517181 CHD7Q9P2D1 2997 aa-1.78□□□□□ -2.69
RNU1-54P-201ENST00000517181 A0A1B0GX51 115 aa-1.78□□□□□ -2.69
RNU1-54P-201ENST00000517181 H0YJX3 145 aa-1.78□□□□□ -2.69
RNU1-54P-201ENST00000517181 PITX3O75364 302 aa-1.78□□□□□ -2.69
RNU1-54P-201ENST00000517181 TNFSF15O95150 251 aa-1.78□□□□□ -2.69
RNU1-54P-201ENST00000517181 MAFIPQ8WZ33 124 aa-1.78□□□□□ -2.69
RNU1-54P-201ENST00000517181 GAPVD1Q14C86 1478 aa-1.78□□□□□ -2.69
RNU1-54P-201ENST00000517181 C5orf42Q9H799 3197 aa-1.78□□□□□ -2.69
RNU1-54P-201ENST00000517181 COL6A5A8TX70 2615 aa-1.79□□□□□ -2.7
RNU1-54P-201ENST00000517181 H0YGG7 62 aa-1.79□□□□□ -2.7
RNU1-54P-201ENST00000517181 PIRTP0C851 137 aa-1.79□□□□□ -2.7
RNU1-54P-201ENST00000517181 CCL18P55774 89 aa-1.79□□□□□ -2.7
RNU1-54P-201ENST00000517181 H1FX-AS1Q4G0G2 97 aa-1.79□□□□□ -2.7
RNU1-54P-201ENST00000517181 Q6JHZ5 121 aa-1.79□□□□□ -2.7
RNU1-54P-201ENST00000517181 ZNF818PQ6ZRF7 136 aa-1.79□□□□□ -2.7
RNU1-54P-201ENST00000517181 CDC26Q8NHZ8 85 aa-1.79□□□□□ -2.7
RNU1-54P-201ENST00000517181 ACACBO00763 2458 aa-1.79□□□□□ -2.7
RNU1-54P-201ENST00000517181 TCTE3Q8IZS6 198 aa-1.8□□□□□ -2.7
RNU1-54P-201ENST00000517181 HIGD1AQ9Y241 93 aa-1.8□□□□□ -2.7
RNU1-54P-201ENST00000517181 ZNF236Q9UL36 1845 aa-1.8□□□□□ -2.7
RNU1-54P-201ENST00000517181 MYO9AB2RTY4 2548 aa-1.8□□□□□ -2.7
RNU1-54P-201ENST00000517181 LRRC37A2A6NM11 1700 aa-1.8□□□□□ -2.7
RNU1-54P-201ENST00000517181 COL4A6Q14031 1691 aa-1.8□□□□□ -2.7
RNU1-54P-201ENST00000517181 MYH13Q9UKX3 1938 aa-1.81□□□□□ -2.7
RNU1-54P-201ENST00000517181 A0A1B0GV72 72 aa-1.81□□□□□ -2.7
RNU1-54P-201ENST00000517181 CPSF4LA6NMK7 179 aaKnown RBP-1.81□□□□□ -2.7
RNU1-54P-201ENST00000517181 SYS1-DBNDD2H3BUS1 97 aa-1.81□□□□□ -2.7
RNU1-54P-201ENST00000517181 IFNA17P01571 189 aa-1.81□□□□□ -2.7
RNU1-54P-201ENST00000517181 IFNGP01579 166 aa-1.81□□□□□ -2.7
RNU1-54P-201ENST00000517181 UBE2G1P62253 170 aa-1.81□□□□□ -2.7
RNU1-54P-201ENST00000517181 MIC13Q5XKP0 118 aa-1.81□□□□□ -2.7
RNU1-54P-201ENST00000517181 CENPHQ9H3R5 247 aa-1.81□□□□□ -2.7
RNU1-54P-201ENST00000517181 PTPN23Q9H3S7 1636 aa-1.81□□□□□ -2.7
RNU1-54P-201ENST00000517181 ADAMTS12P58397 1594 aa-1.81□□□□□ -2.7
RNU1-54P-201ENST00000517181 PXDNQ92626 1479 aa-1.82□□□□□ -2.7
RNU1-54P-201ENST00000517181 COX8AP10176 69 aa-1.82□□□□□ -2.7
RNU1-54P-201ENST00000517181 SMIM4Q8WVI0 70 aa-1.82□□□□□ -2.7
RNU1-54P-201ENST00000517181 SYNJ1O43426 1573 aa-1.82□□□□□ -2.7
RNU1-54P-201ENST00000517181 CFAP46Q8IYW2 2715 aa-1.82□□□□□ -2.7
RNU1-54P-201ENST00000517181 SRCAPQ6ZRS2 3230 aa-1.83□□□□□ -2.7
RNU1-54P-201ENST00000517181 DNAH7Q8WXX0 4024 aa-1.83□□□□□ -2.7
RNU1-54P-201ENST00000517181 M0R135 149 aa-1.83□□□□□ -2.7
RNU1-54P-201ENST00000517181 NAA60Q9H7X0 242 aa-1.83□□□□□ -2.7
RNU1-54P-201ENST00000517181 LINC00312Q9Y6C7 94 aa-1.83□□□□□ -2.7
RNU1-54P-201ENST00000517181 SLIT1O75093 1534 aa-1.83□□□□□ -2.7
RNU1-54P-201ENST00000517181 PRDM2Q13029 1718 aa-1.83□□□□□ -2.7
RNU1-54P-201ENST00000517181 ABCA13Q86UQ4 5058 aa-1.83□□□□□ -2.7
RNU1-54P-201ENST00000517181 DAPK1P53355 1430 aa-1.83□□□□□ -2.7
RNU1-54P-201ENST00000517181 PBRM1Q86U86 1689 aa-1.83□□□□□ -2.7
RNU1-54P-201ENST00000517181 MYH8P13535 1937 aa-1.83□□□□□ -2.7
RNU1-54P-201ENST00000517181 TRIOO75962 3097 aa-1.84□□□□□ -2.7
RNU1-54P-201ENST00000517181 HMGXB3Q12766 1538 aa-1.84□□□□□ -2.7
RNU1-54P-201ENST00000517181 CTXND1A0A1B0GTU2 59 aa-1.84□□□□□ -2.7
RNU1-54P-201ENST00000517181 S100GP29377 79 aa-1.84□□□□□ -2.7
RNU1-54P-201ENST00000517181 TMEM170BQ5T4T1 132 aa-1.84□□□□□ -2.7
RNU1-54P-201ENST00000517181 DDA1Q9BW61 102 aa-1.84□□□□□ -2.7
RNU1-54P-201ENST00000517181 SAR1AQ9NR31 198 aa-1.84□□□□□ -2.7
RNU1-54P-201ENST00000517181 ARHGEF10O15013 1369 aa-1.85□□□□□ -2.7
RNU1-54P-201ENST00000517181 DNAH8Q96JB1 4490 aa-1.85□□□□□ -2.7
RNU1-54P-201ENST00000517181 FMN2Q9NZ56 1722 aa-1.85□□□□□ -2.71
RNU1-54P-201ENST00000517181 POLA1P09884 1462 aaPredicted RBP-1.85□□□□□ -2.71
RNU1-54P-201ENST00000517181 RPL7L1Q6DKI1 246 aaKnown RBP-1.85□□□□□ -2.71
RNU1-54P-201ENST00000517181 SKA2Q8WVK7 121 aaPredicted RBP-1.85□□□□□ -2.71
RNU1-54P-201ENST00000517181 LRBAP50851 2863 aa-1.86□□□□□ -2.71
RNU1-54P-201ENST00000517181 TLN2Q9Y4G6 2542 aa-1.86□□□□□ -2.71
RNU1-54P-201ENST00000517181 MRC1P22897 1456 aa-1.86□□□□□ -2.71
RNU1-54P-201ENST00000517181 A6NIN4 97 aa-1.86□□□□□ -2.71
RNU1-54P-201ENST00000517181 H0YAA0 97 aa-1.86□□□□□ -2.71
RNU1-54P-201ENST00000517181 CMPK1P30085 196 aa-1.86□□□□□ -2.71
RNU1-54P-201ENST00000517181 PAPPA2Q9BXP8 1791 aa-1.86□□□□□ -2.71
RNU1-54P-201ENST00000517181 SBF2Q86WG5 1849 aa-1.87□□□□□ -2.71
RNU1-54P-201ENST00000517181 KIAA0556O60303 1618 aa-1.87□□□□□ -2.71
RNU1-54P-201ENST00000517181 CBLN1P23435 193 aa-1.87□□□□□ -2.71
RNU1-54P-201ENST00000517181 NCS1P62166 190 aa-1.87□□□□□ -2.71
RNU1-54P-201ENST00000517181 CCL8P80075 99 aa-1.87□□□□□ -2.71
RNU1-54P-201ENST00000517181 R4GMQ9 66 aa-1.87□□□□□ -2.71
RNU1-54P-201ENST00000517181 TRBV7-4A0A0J9YYF1 115 aa-1.88□□□□□ -2.71
RNU1-54P-201ENST00000517181 LINC00959A0A1B0GUT2 108 aa-1.88□□□□□ -2.71
RNU1-54P-201ENST00000517181 PPP1R17O96001 155 aa-1.88□□□□□ -2.71
RNU1-54P-201ENST00000517181 PIPP12273 146 aaPredicted RBP-1.88□□□□□ -2.71
RNU1-54P-201ENST00000517181 SPTSSBQ8NFR3 76 aa-1.88□□□□□ -2.71
RNU1-54P-201ENST00000517181 USMG5Q96IX5 58 aa-1.88□□□□□ -2.71
RNU1-54P-201ENST00000517181 AMELXQ99217 191 aa-1.88□□□□□ -2.71
RNU1-54P-201ENST00000517181 GINS2Q9Y248 185 aa-1.88□□□□□ -2.71
RNU1-54P-201ENST00000517181 TULP4Q9NRJ4 1543 aa-1.88□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms