RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 I3L3M4 83 aa2.67□□□□□ -1.98
CAST-242ENST00000515063 CRYGDP07320 174 aa2.67□□□□□ -1.98
CAST-242ENST00000515063 CD7P09564 240 aa2.67□□□□□ -1.98
CAST-242ENST00000515063 COX6B1P14854 86 aa2.67□□□□□ -1.98
CAST-242ENST00000515063 FXYD2P54710 66 aa2.67□□□□□ -1.98
CAST-242ENST00000515063 C12orf74Q32Q52 190 aa2.67□□□□□ -1.98
CAST-242ENST00000515063 AMTNQ6UX39 209 aa2.67□□□□□ -1.98
CAST-242ENST00000515063 Q6ZQT7 251 aa2.67□□□□□ -1.98
CAST-242ENST00000515063 RPL39LQ96EH5 51 aaKnown RBP2.67□□□□□ -1.98
CAST-242ENST00000515063 DNAJC30Q96LL9 226 aa2.67□□□□□ -1.98
CAST-242ENST00000515063 ZNF702PQ9H963 129 aa2.67□□□□□ -1.98
CAST-242ENST00000515063 SPCS1Q9Y6A9 102 aa2.67□□□□□ -1.98
CAST-242ENST00000515063 TACC2O95359 2948 aa2.67□□□□□ -1.98
CAST-242ENST00000515063 HELZ2Q9BYK8 2649 aaKnown RBP2.67□□□□□ -1.98
CAST-242ENST00000515063 CR1P17927 2039 aa2.66□□□□□ -1.98
CAST-242ENST00000515063 AGRNO00468 2067 aa2.66□□□□□ -1.98
CAST-242ENST00000515063 IGLV4-69A0A075B6H9 119 aa2.66□□□□□ -1.98
CAST-242ENST00000515063 TRAV12-3A0A0B4J271 114 aa2.66□□□□□ -1.98
CAST-242ENST00000515063 ZNF815PA8K554 130 aa2.66□□□□□ -1.98
CAST-242ENST00000515063 G3V4G9 280 aa2.66□□□□□ -1.98
CAST-242ENST00000515063 H3BMM0 161 aa2.66□□□□□ -1.98
CAST-242ENST00000515063 J3QR89 54 aa2.66□□□□□ -1.98
CAST-242ENST00000515063 M0QY20 66 aa2.66□□□□□ -1.98
CAST-242ENST00000515063 LEPROTO15243 131 aa2.66□□□□□ -1.98
CAST-242ENST00000515063 ZNF688P0C7X2 276 aa2.66□□□□□ -1.98
CAST-242ENST00000515063 DNAH10OSP0CZ25 163 aa2.66□□□□□ -1.98
CAST-242ENST00000515063 UBE2D1P51668 147 aa2.66□□□□□ -1.98
CAST-242ENST00000515063 CMC4P56277 68 aaPredicted RBP2.66□□□□□ -1.98
CAST-242ENST00000515063 SYNJ2BPP57105 145 aa2.66□□□□□ -1.98
CAST-242ENST00000515063 RRN3P1Q2M238 152 aa2.66□□□□□ -1.98
CAST-242ENST00000515063 MORN3Q6PF18 240 aaPredicted RBP2.66□□□□□ -1.98
CAST-242ENST00000515063 C20orf203Q8NBC4 194 aa2.66□□□□□ -1.98
CAST-242ENST00000515063 CSNK1G2-AS1Q8NCQ2 148 aa2.66□□□□□ -1.98
CAST-242ENST00000515063 ATP6V0E2Q8NHE4 81 aa2.66□□□□□ -1.98
CAST-242ENST00000515063 DLX4Q92988 240 aaPredicted RBP2.66□□□□□ -1.98
CAST-242ENST00000515063 PLEKHB2Q96CS7 222 aa2.66□□□□□ -1.98
CAST-242ENST00000515063 HIST1H4GQ99525 98 aa2.66□□□□□ -1.98
CAST-242ENST00000515063 PRADC1Q9BSG0 188 aa2.66□□□□□ -1.98
CAST-242ENST00000515063 NHP2Q9NX24 153 aaKnown RBP2.66□□□□□ -1.98
CAST-242ENST00000515063 TP53TG1Q9Y2A0 90 aa2.66□□□□□ -1.98
CAST-242ENST00000515063 AKAP6Q13023 2319 aa2.66□□□□□ -1.98
CAST-242ENST00000515063 C2CD3Q4AC94 2353 aa2.65□□□□□ -1.98
CAST-242ENST00000515063 IGKV3-7A0A075B6H7 116 aa2.65□□□□□ -1.99
CAST-242ENST00000515063 A0A0J9YY99 117 aa2.65□□□□□ -1.99
CAST-242ENST00000515063 TMEM223A0PJW6 202 aa2.65□□□□□ -1.99
CAST-242ENST00000515063 M0R2P5 195 aa2.65□□□□□ -1.99
CAST-242ENST00000515063 NDUFA7O95182 113 aa2.65□□□□□ -1.99
CAST-242ENST00000515063 DEFB1P60022 68 aa2.65□□□□□ -1.99
CAST-242ENST00000515063 DEFB113Q30KQ7 82 aa2.65□□□□□ -1.99
CAST-242ENST00000515063 C9orf66Q5T8R8 295 aa2.65□□□□□ -1.99
CAST-242ENST00000515063 SLC25A29Q8N8R3 303 aa2.65□□□□□ -1.99
CAST-242ENST00000515063 C4orf3Q8WVX3 66 aa2.65□□□□□ -1.99
CAST-242ENST00000515063 RAB37Q96AX2 223 aa2.65□□□□□ -1.99
CAST-242ENST00000515063 AMELXQ99217 191 aa2.65□□□□□ -1.99
CAST-242ENST00000515063 TIMM21Q9BVV7 248 aa2.65□□□□□ -1.99
CAST-242ENST00000515063 TTTY13Q9BZ97 58 aa2.65□□□□□ -1.99
CAST-242ENST00000515063 SPTAN1Q13813 2472 aaKnown RBP2.65□□□□□ -1.99
CAST-242ENST00000515063 ITPR1Q14643 2758 aa2.64□□□□□ -1.99
CAST-242ENST00000515063 ITPR3Q14573 2671 aa2.64□□□□□ -1.99
CAST-242ENST00000515063 TRBV20-1A0A075B6N2 111 aa2.64□□□□□ -1.99
CAST-242ENST00000515063 A0A0B4J2C4 111 aa2.64□□□□□ -1.99
CAST-242ENST00000515063 J3QQQ9 107 aa2.64□□□□□ -1.99
CAST-242ENST00000515063 M0QXV9 152 aa2.64□□□□□ -1.99
CAST-242ENST00000515063 RS1O15537 224 aa2.64□□□□□ -1.99
CAST-242ENST00000515063 IGHV3-53P01767 116 aa2.64□□□□□ -1.99
CAST-242ENST00000515063 IGHV3-30P01768 117 aa2.64□□□□□ -1.99
CAST-242ENST00000515063 P0DMU3 169 aa2.64□□□□□ -1.99
CAST-242ENST00000515063 FAM231AP0DMU4 169 aa2.64□□□□□ -1.99
CAST-242ENST00000515063 FAM231CP0DMU5 169 aa2.64□□□□□ -1.99
CAST-242ENST00000515063 IGHV3-30-5P0DP03 117 aa2.64□□□□□ -1.99
CAST-242ENST00000515063 LGALS3P17931 250 aaKnown RBP2.64□□□□□ -1.99
CAST-242ENST00000515063 DEFB131AP59861 70 aa2.64□□□□□ -1.99
CAST-242ENST00000515063 RPL39P62891 51 aaKnown RBP2.64□□□□□ -1.99
CAST-242ENST00000515063 MRPS36P82909 103 aaKnown RBP2.64□□□□□ -1.99
CAST-242ENST00000515063 SMAGPQ0VAQ4 97 aa2.64□□□□□ -1.99
CAST-242ENST00000515063 ZNF56Q15929 161 aa2.64□□□□□ -1.99
CAST-242ENST00000515063 SPINK13Q1W4C9 94 aa2.64□□□□□ -1.99
CAST-242ENST00000515063 DEFB114Q30KQ6 69 aa2.64□□□□□ -1.99
CAST-242ENST00000515063 SCGB1D4Q6XE38 83 aa2.64□□□□□ -1.99
CAST-242ENST00000515063 LINC01600Q96MT4 127 aa2.64□□□□□ -1.99
CAST-242ENST00000515063 VPS25Q9BRG1 176 aa2.64□□□□□ -1.99
CAST-242ENST00000515063 PPDPFQ9H3Y8 114 aa2.64□□□□□ -1.99
CAST-242ENST00000515063 SPANXA1Q9NS26 97 aa2.64□□□□□ -1.99
CAST-242ENST00000515063 TRAV12-2A0A075B6T6 113 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.63□□□□□ -1.99
CAST-242ENST00000515063 A0A0J9YXY3 114 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 TRBV10-1A0A0K0K1A3 114 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 TEX48A0A1B0GUV7 120 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 TINCRA0A1B0GVN0 87 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 TMEM238C9JI98 176 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 H3BMG7 143 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 TIMM17BO60830 172 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 INSP01308 110 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 SCGB1A1P11684 91 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 ZNF22P17026 224 aaPredicted RBP2.63□□□□□ -1.99
CAST-242ENST00000515063 TCTAP57738 103 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 UBE2D3P61077 147 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 UBE2D2P62837 147 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 COTL1Q14019 142 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 TMEM170BQ5T4T1 132 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms