RNA–Protein interactions for RNA: ENST00000514308.3

PDLIM3-210, Transcript of PDZ and LIM domain 3, humanhuman

TSL 2

Gene PDLIM3, Length 906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-210ENST00000514308 KIR2DL4Q99706 377 aa9.04□□□□□ -0.96
PDLIM3-210ENST00000514308 SDHAF1A6NFY7 115 aa9.03□□□□□ -0.96
PDLIM3-210ENST00000514308 C14orf144Q96I85 54 aa9.03□□□□□ -0.96
PDLIM3-210ENST00000514308 PRADC1Q9BSG0 188 aa9.03□□□□□ -0.96
PDLIM3-210ENST00000514308 TRAV12-1A0A0B4J245 112 aa9.02□□□□□ -0.97
PDLIM3-210ENST00000514308 TRBV6-4A0A1B0GX49 114 aa9.02□□□□□ -0.97
PDLIM3-210ENST00000514308 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.02□□□□□ -0.97
PDLIM3-210ENST00000514308 K7EP13 123 aa9.02□□□□□ -0.97
PDLIM3-210ENST00000514308 PRSS1P07477 247 aa9.02□□□□□ -0.97
PDLIM3-210ENST00000514308 RHOHQ15669 191 aa9.02□□□□□ -0.97
PDLIM3-210ENST00000514308 SLC25A29Q8N8R3 303 aa9.02□□□□□ -0.97
PDLIM3-210ENST00000514308 DNAJC30Q96LL9 226 aa9.02□□□□□ -0.97
PDLIM3-210ENST00000514308 PKD1P98161 4303 aa9.01□□□□□ -0.97
PDLIM3-210ENST00000514308 DNAH11Q96DT5 4516 aa9.01□□□□□ -0.97
PDLIM3-210ENST00000514308 LOC100131303A0A0U1RQF7 123 aa9.01□□□□□ -0.97
PDLIM3-210ENST00000514308 C16orf90A8MZG2 172 aa9.01□□□□□ -0.97
PDLIM3-210ENST00000514308 H0Y8G0 127 aa9.01□□□□□ -0.97
PDLIM3-210ENST00000514308 LBHQ53QV2 105 aaPredicted RBP9.01□□□□□ -0.97
PDLIM3-210ENST00000514308 C2orf66Q6UXQ4 117 aa9.01□□□□□ -0.97
PDLIM3-210ENST00000514308 SCGB3A1Q96QR1 104 aa9.01□□□□□ -0.97
PDLIM3-210ENST00000514308 CYSLTR1Q9Y271 337 aa9.01□□□□□ -0.97
PDLIM3-210ENST00000514308 IGHV3-73A0A0B4J1V6 119 aa9□□□□□ -0.97
PDLIM3-210ENST00000514308 I3L3M4 83 aa9□□□□□ -0.97
PDLIM3-210ENST00000514308 TIRAPP58753 221 aa9□□□□□ -0.97
PDLIM3-210ENST00000514308 ODF1Q14990 250 aa9□□□□□ -0.97
PDLIM3-210ENST00000514308 MAJINQ3KP22 176 aa9□□□□□ -0.97
PDLIM3-210ENST00000514308 Q6ZN92 141 aa9□□□□□ -0.97
PDLIM3-210ENST00000514308 ERASQ7Z444 233 aa9□□□□□ -0.97
PDLIM3-210ENST00000514308 NFE4Q86UQ8 179 aa9□□□□□ -0.97
PDLIM3-210ENST00000514308 WFDC10BQ8IUB3 73 aa9□□□□□ -0.97
PDLIM3-210ENST00000514308 KIAA1109Q2LD37 5005 aa9□□□□□ -0.97
PDLIM3-210ENST00000514308 A0A087WX48 190 aa8.99□□□□□ -0.97
PDLIM3-210ENST00000514308 hDV102S1A0JD36 115 aa8.99□□□□□ -0.97
PDLIM3-210ENST00000514308 DNAH10OSP0CZ25 163 aa8.99□□□□□ -0.97
PDLIM3-210ENST00000514308 TMEM141Q96I45 108 aa8.99□□□□□ -0.97
PDLIM3-210ENST00000514308 PMCHL2Q9BQD1 86 aa8.99□□□□□ -0.97
PDLIM3-210ENST00000514308 HERC2O95714 4834 aa8.98□□□□□ -0.97
PDLIM3-210ENST00000514308 C10orf126Q8N4M7 172 aa8.98□□□□□ -0.97
PDLIM3-210ENST00000514308 TIMM17AQ99595 171 aa8.98□□□□□ -0.97
PDLIM3-210ENST00000514308 TNFRSF18Q9Y5U5 241 aa8.98□□□□□ -0.97
PDLIM3-210ENST00000514308 TRAV8-6A0A0B4J262 113 aa8.97□□□□□ -0.97
PDLIM3-210ENST00000514308 IGHV3-38A0A0C4DH36 116 aa8.97□□□□□ -0.97
PDLIM3-210ENST00000514308 M0R143 59 aa8.97□□□□□ -0.97
PDLIM3-210ENST00000514308 DPM2O94777 84 aa8.97□□□□□ -0.97
PDLIM3-210ENST00000514308 IGKCP01834 107 aa8.97□□□□□ -0.97
PDLIM3-210ENST00000514308 CTAG1AP78358 180 aa8.97□□□□□ -0.97
PDLIM3-210ENST00000514308 Q6ZRN7 208 aaPredicted RBP8.97□□□□□ -0.97
PDLIM3-210ENST00000514308 NEXN-AS1Q8NBZ9 246 aa8.97□□□□□ -0.97
PDLIM3-210ENST00000514308 IGIPA6NJ69 53 aa8.96□□□□□ -0.98
PDLIM3-210ENST00000514308 EREGO14944 169 aa8.96□□□□□ -0.98
PDLIM3-210ENST00000514308 TSHBP01222 138 aa8.96□□□□□ -0.98
PDLIM3-210ENST00000514308 COX8AP10176 69 aa8.96□□□□□ -0.98
PDLIM3-210ENST00000514308 HNRNPA3P51991 378 aaKnown RBP8.96□□□□□ -0.98
PDLIM3-210ENST00000514308 SLC25A34Q6PIV7 304 aa8.96□□□□□ -0.98
PDLIM3-210ENST00000514308 ATP6V0E2Q8NHE4 81 aa8.96□□□□□ -0.98
PDLIM3-210ENST00000514308 DYNC1H1Q14204 4646 aaKnown RBP8.95□□□□□ -0.98
PDLIM3-210ENST00000514308 TRBV10-1A0A0K0K1A3 114 aa8.95□□□□□ -0.98
PDLIM3-210ENST00000514308 F8VRH5 84 aa8.95□□□□□ -0.98
PDLIM3-210ENST00000514308 NPSP0C0P6 89 aa8.95□□□□□ -0.98
PDLIM3-210ENST00000514308 PLNP26678 52 aa8.95□□□□□ -0.98
PDLIM3-210ENST00000514308 Q6ZSN1 163 aa8.95□□□□□ -0.98
PDLIM3-210ENST00000514308 C20orf203Q8NBC4 194 aa8.95□□□□□ -0.98
PDLIM3-210ENST00000514308 KRTAP17-1Q9BYP8 105 aa8.95□□□□□ -0.98
PDLIM3-210ENST00000514308 GTSF1LQ9H1H1 148 aa8.95□□□□□ -0.98
PDLIM3-210ENST00000514308 DLEU1O43261 78 aa8.94□□□□□ -0.98
PDLIM3-210ENST00000514308 LINC01556Q5JQF7 62 aa8.94□□□□□ -0.98
PDLIM3-210ENST00000514308 PAPPA-AS1Q5QFB9 102 aa8.94□□□□□ -0.98
PDLIM3-210ENST00000514308 LELP1Q5T871 98 aa8.94□□□□□ -0.98
PDLIM3-210ENST00000514308 BAALCQ8WXS3 180 aa8.94□□□□□ -0.98
PDLIM3-210ENST00000514308 C2orf88Q9BSF0 95 aa8.94□□□□□ -0.98
PDLIM3-210ENST00000514308 MRPL35Q9NZE8 188 aaKnown RBP8.94□□□□□ -0.98
PDLIM3-210ENST00000514308 CHTOPQ9Y3Y2 248 aaKnown RBP8.94□□□□□ -0.98
PDLIM3-210ENST00000514308 GAGE12JA6NER3 117 aa8.93□□□□□ -0.98
PDLIM3-210ENST00000514308 CDK2AP2O75956 126 aa8.93□□□□□ -0.98
PDLIM3-210ENST00000514308 KRTAP10-2P60368 255 aa8.93□□□□□ -0.98
PDLIM3-210ENST00000514308 GAGE1Q13065 139 aa8.93□□□□□ -0.98
PDLIM3-210ENST00000514308 GAGE4Q13068 117 aa8.93□□□□□ -0.98
PDLIM3-210ENST00000514308 GAGE5Q13069 117 aa8.93□□□□□ -0.98
PDLIM3-210ENST00000514308 PMVKQ15126 192 aa8.93□□□□□ -0.98
PDLIM3-210ENST00000514308 GAGE13Q4V321 117 aa8.93□□□□□ -0.98
PDLIM3-210ENST00000514308 ANKRD39Q53RE8 183 aa8.93□□□□□ -0.98
PDLIM3-210ENST00000514308 PYGO1Q9Y3Y4 419 aa8.93□□□□□ -0.98
PDLIM3-210ENST00000514308 STPG4Q8N801 248 aa8.92□□□□□ -0.98
PDLIM3-210ENST00000514308 SNHG12Q9BXW3 62 aa8.92□□□□□ -0.98
PDLIM3-210ENST00000514308 PGPEP1Q9NXJ5 209 aa8.92□□□□□ -0.98
PDLIM3-210ENST00000514308 TRBV7-3A0A075B6L6 115 aa8.91□□□□□ -0.98
PDLIM3-210ENST00000514308 BOD1L2Q8IYS8 172 aa8.91□□□□□ -0.98
PDLIM3-210ENST00000514308 A0A087WTM6 91 aa8.9□□□□□ -0.98
PDLIM3-210ENST00000514308 IBA57-AS1B1ANH7 110 aa8.9□□□□□ -0.98
PDLIM3-210ENST00000514308 PSCAO43653 123 aa8.9□□□□□ -0.98
PDLIM3-210ENST00000514308 LINC00694P0DN24 101 aa8.9□□□□□ -0.98
PDLIM3-210ENST00000514308 RPL39P62891 51 aaKnown RBP8.9□□□□□ -0.98
PDLIM3-210ENST00000514308 RPL36AP83881 106 aaKnown RBP8.9□□□□□ -0.98
PDLIM3-210ENST00000514308 COTL1Q14019 142 aa8.9□□□□□ -0.98
PDLIM3-210ENST00000514308 RPL36ALQ969Q0 106 aaKnown RBP8.9□□□□□ -0.98
PDLIM3-210ENST00000514308 CST9LQ9H4G1 147 aa8.9□□□□□ -0.98
PDLIM3-210ENST00000514308 IGHV3-30P01768 117 aa8.89□□□□□ -0.99
PDLIM3-210ENST00000514308 IGHV3-33P01772 117 aa8.89□□□□□ -0.99
PDLIM3-210ENST00000514308 IGHV3-30-3P0DP02 117 aa8.89□□□□□ -0.99
PDLIM3-210ENST00000514308 IGHV3-30-5P0DP03 117 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms