RNA–Protein interactions for RNA: ENST00000513946.1

PROM1-216, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-216ENST00000513946 Q8TAT8 98 aa2.33□□□□□ -2.04
PROM1-216ENST00000513946 HES7Q9BYE0 225 aa2.33□□□□□ -2.04
PROM1-216ENST00000513946 XCL2Q9UBD3 114 aa2.33□□□□□ -2.04
PROM1-216ENST00000513946 KIF25-AS1Q9Y6Z4 181 aa2.33□□□□□ -2.04
PROM1-216ENST00000513946 KIAA2026Q5HYC2 2103 aa2.33□□□□□ -2.04
PROM1-216ENST00000513946 SEC16AO15027 2179 aa2.33□□□□□ -2.04
PROM1-216ENST00000513946 TRAV41A0A0B4J266 112 aa2.32□□□□□ -2.04
PROM1-216ENST00000513946 IGHV3-64DA0A0J9YX35 117 aa2.32□□□□□ -2.04
PROM1-216ENST00000513946 PLAC8L1A1L4L8 177 aa2.32□□□□□ -2.04
PROM1-216ENST00000513946 H3BPC8 53 aa2.32□□□□□ -2.04
PROM1-216ENST00000513946 NDUFS5O43920 106 aa2.32□□□□□ -2.04
PROM1-216ENST00000513946 IGHV3-53P01767 116 aa2.32□□□□□ -2.04
PROM1-216ENST00000513946 RNASE3P12724 160 aaKnown RBP2.32□□□□□ -2.04
PROM1-216ENST00000513946 MIFP14174 115 aa2.32□□□□□ -2.04
PROM1-216ENST00000513946 FBXL19-AS1Q494R0 122 aa2.32□□□□□ -2.04
PROM1-216ENST00000513946 FAM74A4Q5TZK3 123 aa2.32□□□□□ -2.04
PROM1-216ENST00000513946 CLEC19AQ6UXS0 136 aa2.32□□□□□ -2.04
PROM1-216ENST00000513946 MRPL55Q7Z7F7 128 aaKnown RBP2.32□□□□□ -2.04
PROM1-216ENST00000513946 Q8N6K4 173 aa2.32□□□□□ -2.04
PROM1-216ENST00000513946 UPK3BQ9BT76 320 aa2.32□□□□□ -2.04
PROM1-216ENST00000513946 SND1-IT1Q9HBX3 110 aa2.32□□□□□ -2.04
PROM1-216ENST00000513946 LRP4O75096 1905 aa2.32□□□□□ -2.04
PROM1-216ENST00000513946 IGHV3-21A0A0B4J1V1 117 aa2.31□□□□□ -2.04
PROM1-216ENST00000513946 IGHV7-81A0A0B4J1V7 117 aa2.31□□□□□ -2.04
PROM1-216ENST00000513946 IGHV3-72A0A0B4J1Y9 119 aa2.31□□□□□ -2.04
PROM1-216ENST00000513946 IGHV3-16A0A0C4DH30 117 aa2.31□□□□□ -2.04
PROM1-216ENST00000513946 A0A0J9YXV3 536 aa2.31□□□□□ -2.04
PROM1-216ENST00000513946 J3QLI3 93 aa2.31□□□□□ -2.04
PROM1-216ENST00000513946 SNRNP200O75643 2136 aaKnown RBP2.31□□□□□ -2.04
PROM1-216ENST00000513946 COX7A1P24310 79 aa2.31□□□□□ -2.04
PROM1-216ENST00000513946 UBE2BP63146 152 aa2.31□□□□□ -2.04
PROM1-216ENST00000513946 BSPH1Q075Z2 132 aa2.31□□□□□ -2.04
PROM1-216ENST00000513946 ESRGQ1W209 222 aa2.31□□□□□ -2.04
PROM1-216ENST00000513946 Q6ZRU5 148 aa2.31□□□□□ -2.04
PROM1-216ENST00000513946 C20orf197Q8N268 126 aa2.31□□□□□ -2.04
PROM1-216ENST00000513946 TET1Q8NFU7 2136 aa2.31□□□□□ -2.04
PROM1-216ENST00000513946 RPL39LQ96EH5 51 aaKnown RBP2.31□□□□□ -2.04
PROM1-216ENST00000513946 LIMD2Q9BT23 127 aa2.31□□□□□ -2.04
PROM1-216ENST00000513946 RHPN1-AS1Q9BWJ2 59 aa2.31□□□□□ -2.04
PROM1-216ENST00000513946 BPESC1Q9GZL8 116 aa2.31□□□□□ -2.04
PROM1-216ENST00000513946 CYP4F30PQ9H0H9 118 aa2.31□□□□□ -2.04
PROM1-216ENST00000513946 ESM1Q9NQ30 184 aa2.31□□□□□ -2.04
PROM1-216ENST00000513946 RP1P56715 2156 aa2.31□□□□□ -2.04
PROM1-216ENST00000513946 MYO7BQ6PIF6 2116 aa2.3□□□□□ -2.04
PROM1-216ENST00000513946 PRRC2BQ5JSZ5 2229 aaKnown RBP2.3□□□□□ -2.04
PROM1-216ENST00000513946 USF3Q68DE3 2245 aa2.3□□□□□ -2.04
PROM1-216ENST00000513946 TRAV12-3A0A0B4J271 114 aa2.3□□□□□ -2.04
PROM1-216ENST00000513946 K7EQD1 137 aa2.3□□□□□ -2.04
PROM1-216ENST00000513946 RTL8CO15255 209 aa2.3□□□□□ -2.04
PROM1-216ENST00000513946 LINC00158P58513 81 aa2.3□□□□□ -2.04
PROM1-216ENST00000513946 LINC00315P59091 139 aa2.3□□□□□ -2.04
PROM1-216ENST00000513946 ELOF1P60002 83 aaKnown RBP2.3□□□□□ -2.04
PROM1-216ENST00000513946 RPL39P62891 51 aaKnown RBP2.3□□□□□ -2.04
PROM1-216ENST00000513946 SS18Q15532 418 aa2.3□□□□□ -2.04
PROM1-216ENST00000513946 C9orf66Q5T8R8 295 aa2.3□□□□□ -2.04
PROM1-216ENST00000513946 HRCT1Q6UXD1 115 aa2.3□□□□□ -2.04
PROM1-216ENST00000513946 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.3□□□□□ -2.04
PROM1-216ENST00000513946 Q8N9W7 124 aa2.3□□□□□ -2.04
PROM1-216ENST00000513946 COX7B2Q8TF08 81 aa2.3□□□□□ -2.04
PROM1-216ENST00000513946 BRK1Q8WUW1 75 aa2.3□□□□□ -2.04
PROM1-216ENST00000513946 CLEC2BQ92478 149 aa2.3□□□□□ -2.04
PROM1-216ENST00000513946 LINC00167Q96N53 147 aa2.3□□□□□ -2.04
PROM1-216ENST00000513946 EXPH5Q8NEV8 1989 aa2.3□□□□□ -2.04
PROM1-216ENST00000513946 GTF3C1Q12789 2109 aa2.3□□□□□ -2.04
PROM1-216ENST00000513946 MED12LQ86YW9 2145 aa2.3□□□□□ -2.04
PROM1-216ENST00000513946 ARHGAP21Q5T5U3 1957 aa2.29□□□□□ -2.04
PROM1-216ENST00000513946 TRBV6-4A0A1B0GX49 114 aa2.29□□□□□ -2.04
PROM1-216ENST00000513946 CLPSL1A2RUU4 121 aa2.29□□□□□ -2.04
PROM1-216ENST00000513946 EPOPA6NHQ4 379 aa2.29□□□□□ -2.04
PROM1-216ENST00000513946 H7BZZ5 65 aa2.29□□□□□ -2.04
PROM1-216ENST00000513946 CCL21O00585 134 aa2.29□□□□□ -2.04
PROM1-216ENST00000513946 INSP01308 110 aa2.29□□□□□ -2.04
PROM1-216ENST00000513946 TRBV12-3P01733 135 aa2.29□□□□□ -2.04
PROM1-216ENST00000513946 SAA4P35542 130 aa2.29□□□□□ -2.04
PROM1-216ENST00000513946 FUSP35637 526 aaKnown RBP eCLIP2.29□□□□□ -2.04
PROM1-216ENST00000513946 ECSCRQ19T08 205 aa2.29□□□□□ -2.04
PROM1-216ENST00000513946 Q1T7F1 81 aa2.29□□□□□ -2.04
PROM1-216ENST00000513946 HIGD2BQ4VC39 106 aa2.29□□□□□ -2.04
PROM1-216ENST00000513946 Q8N814 137 aa2.29□□□□□ -2.04
PROM1-216ENST00000513946 ZNF625Q96I27 306 aaPredicted RBP2.29□□□□□ -2.04
PROM1-216ENST00000513946 Q9HAA7 133 aa2.29□□□□□ -2.04
PROM1-216ENST00000513946 LINC00846Q9NV44 126 aa2.29□□□□□ -2.04
PROM1-216ENST00000513946 F5P12259 2224 aa2.29□□□□□ -2.04
PROM1-216ENST00000513946 CACNA1DQ01668 2161 aa2.29□□□□□ -2.04
PROM1-216ENST00000513946 RAI1Q7Z5J4 1906 aaPredicted RBP2.29□□□□□ -2.04
PROM1-216ENST00000513946 IGHV4-30-2A0A087WSY4 118 aa2.28□□□□□ -2.04
PROM1-216ENST00000513946 IGHV3-35A0A0C4DH35 117 aa2.28□□□□□ -2.04
PROM1-216ENST00000513946 GNRH2O43555 120 aa2.28□□□□□ -2.04
PROM1-216ENST00000513946 LY6G6DO95868 133 aa2.28□□□□□ -2.04
PROM1-216ENST00000513946 APELAP0DMC3 54 aa2.28□□□□□ -2.04
PROM1-216ENST00000513946 TSPEAR-AS2P59090 65 aa2.28□□□□□ -2.04
PROM1-216ENST00000513946 HAMPP81172 84 aa2.28□□□□□ -2.04
PROM1-216ENST00000513946 C4orf26Q17RF5 130 aa2.28□□□□□ -2.04
PROM1-216ENST00000513946 ASB16-AS1Q495Z4 193 aa2.28□□□□□ -2.04
PROM1-216ENST00000513946 Q5XG85 94 aa2.28□□□□□ -2.04
PROM1-216ENST00000513946 KRTAP11-1Q8IUC1 163 aa2.28□□□□□ -2.04
PROM1-216ENST00000513946 Q8IZM0 81 aa2.28□□□□□ -2.04
PROM1-216ENST00000513946 C5orf56Q8N8D9 126 aa2.28□□□□□ -2.04
PROM1-216ENST00000513946 FDCSPQ8NFU4 85 aa2.28□□□□□ -2.04
PROM1-216ENST00000513946 TMEM254Q8TBM7 123 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms