RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 LRRC37A5PQ49AS3 106 aa5.23□□□□□ -1.57
PTPN20-228ENST00000513266 PCOTHQ58A44 107 aa5.23□□□□□ -1.57
PTPN20-228ENST00000513266 C9orf129Q5T035 196 aaKnown RBP5.23□□□□□ -1.57
PTPN20-228ENST00000513266 C6orf48Q9UBA6 75 aa5.23□□□□□ -1.57
PTPN20-228ENST00000513266 V9GYH0 126 aa5.23□□□□□ -1.57
PTPN20-228ENST00000513266 BCE1O60756 84 aa5.22□□□□□ -1.57
PTPN20-228ENST00000513266 BTCP35070 178 aa5.22□□□□□ -1.57
PTPN20-228ENST00000513266 CDC34P49427 236 aaPredicted RBP5.22□□□□□ -1.57
PTPN20-228ENST00000513266 C3orf22Q8N5N4 141 aa5.22□□□□□ -1.57
PTPN20-228ENST00000513266 KRTAP9-8Q9BYQ0 159 aa5.22□□□□□ -1.57
PTPN20-228ENST00000513266 A0A1W2PRE2 83 aa5.21□□□□□ -1.58
PTPN20-228ENST00000513266 SPAG11AQ6PDA7 123 aa5.21□□□□□ -1.58
PTPN20-228ENST00000513266 C5orf38Q86SI9 138 aa5.21□□□□□ -1.58
PTPN20-228ENST00000513266 DAND5Q8N907 189 aa5.21□□□□□ -1.58
PTPN20-228ENST00000513266 SCGB1C1Q8TD33 95 aa5.21□□□□□ -1.58
PTPN20-228ENST00000513266 RAB24Q969Q5 203 aa5.21□□□□□ -1.58
PTPN20-228ENST00000513266 BTF3L4Q96K17 158 aa5.21□□□□□ -1.58
PTPN20-228ENST00000513266 UBE2D4Q9Y2X8 147 aa5.21□□□□□ -1.58
PTPN20-228ENST00000513266 NAP1L6A6NFF2 107 aa5.2□□□□□ -1.58
PTPN20-228ENST00000513266 H0YIZ8 118 aa5.2□□□□□ -1.58
PTPN20-228ENST00000513266 NCR2O95944 276 aa5.2□□□□□ -1.58
PTPN20-228ENST00000513266 LTAP01374 205 aa5.2□□□□□ -1.58
PTPN20-228ENST00000513266 APCSP02743 223 aa5.2□□□□□ -1.58
PTPN20-228ENST00000513266 CTRLP40313 264 aa5.2□□□□□ -1.58
PTPN20-228ENST00000513266 UNQ6190/PRO20217Q6UXQ8 127 aa5.2□□□□□ -1.58
PTPN20-228ENST00000513266 COX6B2Q6YFQ2 88 aa5.2□□□□□ -1.58
PTPN20-228ENST00000513266 TMEM101Q96IK0 257 aa5.2□□□□□ -1.58
PTPN20-228ENST00000513266 CDC42SE2Q9NRR3 84 aa5.2□□□□□ -1.58
PTPN20-228ENST00000513266 TMEM167BQ9NRX6 74 aa5.2□□□□□ -1.58
PTPN20-228ENST00000513266 NEBP20929 6669 aa5.2□□□□□ -1.58
PTPN20-228ENST00000513266 NDUFA1O15239 70 aa5.19□□□□□ -1.58
PTPN20-228ENST00000513266 KRTAP13-1Q8IUC0 172 aa5.19□□□□□ -1.58
PTPN20-228ENST00000513266 KIR2DL4Q99706 377 aa5.19□□□□□ -1.58
PTPN20-228ENST00000513266 SEC22CQ9BRL7 303 aa5.19□□□□□ -1.58
PTPN20-228ENST00000513266 SMIM3Q9BZL3 60 aa5.19□□□□□ -1.58
PTPN20-228ENST00000513266 C22orf24Q9Y442 160 aa5.19□□□□□ -1.58
PTPN20-228ENST00000513266 C1orf196B1AJZ1 125 aa5.18□□□□□ -1.58
PTPN20-228ENST00000513266 F8WDY8 70 aa5.18□□□□□ -1.58
PTPN20-228ENST00000513266 TMEM241Q24JQ0 296 aa5.18□□□□□ -1.58
PTPN20-228ENST00000513266 OR10D4PQ8NGN7 298 aa5.18□□□□□ -1.58
PTPN20-228ENST00000513266 HIST1H2BAQ96A08 127 aa5.18□□□□□ -1.58
PTPN20-228ENST00000513266 FMC1Q96HJ9 113 aa5.18□□□□□ -1.58
PTPN20-228ENST00000513266 CXorf1O96002 111 aa5.17□□□□□ -1.58
PTPN20-228ENST00000513266 UBE2G2P60604 165 aa5.17□□□□□ -1.58
PTPN20-228ENST00000513266 UBE2G1P62253 170 aa5.17□□□□□ -1.58
PTPN20-228ENST00000513266 ORAOV1Q8WV07 137 aa5.17□□□□□ -1.58
PTPN20-228ENST00000513266 KRTAP9-9Q9BYP9 154 aa5.17□□□□□ -1.58
PTPN20-228ENST00000513266 KRTAP9-4Q9BYQ2 154 aa5.17□□□□□ -1.58
PTPN20-228ENST00000513266 HSPB11Q9Y547 144 aa5.17□□□□□ -1.58
PTPN20-228ENST00000513266 ALG5Q9Y673 324 aa5.17□□□□□ -1.58
PTPN20-228ENST00000513266 FAM74A7A6NL05 159 aa5.15□□□□□ -1.59
PTPN20-228ENST00000513266 NDUFC2-KCTD14E9PQ53 114 aa5.15□□□□□ -1.59
PTPN20-228ENST00000513266 LBHQ53QV2 105 aaPredicted RBP5.15□□□□□ -1.59
PTPN20-228ENST00000513266 MRPL52Q86TS9 123 aaKnown RBP5.15□□□□□ -1.59
PTPN20-228ENST00000513266 GATD1Q8NB37 220 aa5.15□□□□□ -1.59
PTPN20-228ENST00000513266 RPL39LQ96EH5 51 aaKnown RBP5.15□□□□□ -1.59
PTPN20-228ENST00000513266 IGLC6P0CF74 106 aa5.14□□□□□ -1.59
PTPN20-228ENST00000513266 RNASE13Q5GAN3 156 aaKnown RBP5.14□□□□□ -1.59
PTPN20-228ENST00000513266 TRAV13-1A0A0B4J241 112 aa5.13□□□□□ -1.59
PTPN20-228ENST00000513266 SDHAF1A6NFY7 115 aa5.13□□□□□ -1.59
PTPN20-228ENST00000513266 SIX6O95475 246 aa5.13□□□□□ -1.59
PTPN20-228ENST00000513266 DEFA1P59665 94 aa5.13□□□□□ -1.59
PTPN20-228ENST00000513266 PACRGQ96M98 296 aaPredicted RBP5.13□□□□□ -1.59
PTPN20-228ENST00000513266 TPPP3Q9BW30 176 aa5.13□□□□□ -1.59
PTPN20-228ENST00000513266 RPL37AP8A6NKH3 93 aa5.12□□□□□ -1.59
PTPN20-228ENST00000513266 ATP6V1G2O95670 118 aa5.12□□□□□ -1.59
PTPN20-228ENST00000513266 TRGC1P0CF51 173 aa5.12□□□□□ -1.59
PTPN20-228ENST00000513266 UBE2AP49459 152 aa5.12□□□□□ -1.59
PTPN20-228ENST00000513266 CNPY1Q3B7I2 92 aa5.12□□□□□ -1.59
PTPN20-228ENST00000513266 KRTAP19-6Q3LI70 58 aa5.12□□□□□ -1.59
PTPN20-228ENST00000513266 MZT2BQ6NZ67 158 aa5.12□□□□□ -1.59
PTPN20-228ENST00000513266 MRPL55Q7Z7F7 128 aaKnown RBP5.12□□□□□ -1.59
PTPN20-228ENST00000513266 MRAP2Q96G30 205 aa5.12□□□□□ -1.59
PTPN20-228ENST00000513266 NKX6-2Q9C056 277 aaPredicted RBP5.12□□□□□ -1.59
PTPN20-228ENST00000513266 CYTL1Q9NRR1 136 aa5.12□□□□□ -1.59
PTPN20-228ENST00000513266 NDUFA12Q9UI09 145 aa5.12□□□□□ -1.59
PTPN20-228ENST00000513266 TRBV30A0A0K0K1B3 111 aa5.11□□□□□ -1.59
PTPN20-228ENST00000513266 KIAA0087Q14695 138 aa5.11□□□□□ -1.59
PTPN20-228ENST00000513266 TRIQKQ629K1 86 aa5.11□□□□□ -1.59
PTPN20-228ENST00000513266 TP73-AS1Q9UF72 201 aa5.11□□□□□ -1.59
PTPN20-228ENST00000513266 IGHV3OR16-9A0A0B4J2B5 98 aa5.1□□□□□ -1.59
PTPN20-228ENST00000513266 INMT-MINDY4F8WBC2 141 aa5.1□□□□□ -1.59
PTPN20-228ENST00000513266 I3L3M4 83 aa5.1□□□□□ -1.59
PTPN20-228ENST00000513266 ATP6V0CP27449 155 aa5.1□□□□□ -1.59
PTPN20-228ENST00000513266 AKR1C3P42330 323 aa5.1□□□□□ -1.59
PTPN20-228ENST00000513266 ZNF726P1Q15940 193 aa5.1□□□□□ -1.59
PTPN20-228ENST00000513266 C2orf82Q6UX34 121 aa5.1□□□□□ -1.59
PTPN20-228ENST00000513266 Q8N377 158 aa5.1□□□□□ -1.59
PTPN20-228ENST00000513266 LINC00469Q8N7U9 141 aa5.1□□□□□ -1.59
PTPN20-228ENST00000513266 Q8NBF4 154 aa5.1□□□□□ -1.59
PTPN20-228ENST00000513266 MARVELD1Q9BSK0 173 aa5.1□□□□□ -1.59
PTPN20-228ENST00000513266 ACTR3CQ9C0K3 210 aaPredicted RBP5.1□□□□□ -1.59
PTPN20-228ENST00000513266 RNASE7Q9H1E1 156 aaKnown RBP5.1□□□□□ -1.59
PTPN20-228ENST00000513266 XAGE1AQ9HD64 81 aa5.1□□□□□ -1.59
PTPN20-228ENST00000513266 LINC00846Q9NV44 126 aa5.1□□□□□ -1.59
PTPN20-228ENST00000513266 TMEM242Q9NWH2 141 aa5.1□□□□□ -1.59
PTPN20-228ENST00000513266 CENPXA8MT69 81 aa5.09□□□□□ -1.59
PTPN20-228ENST00000513266 SPINK1P00995 79 aa5.09□□□□□ -1.59
PTPN20-228ENST00000513266 PMCHP20382 165 aa5.09□□□□□ -1.59
PTPN20-228ENST00000513266 FOXA3P55318 350 aaPredicted RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms