RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 F8VRH5 84 aa11.74□□□□□ -0.53
HMGCL-209ENST00000513148 GAGE7O76087 117 aa11.74□□□□□ -0.53
HMGCL-209ENST00000513148 GAGE12FP0CL80 117 aa11.74□□□□□ -0.53
HMGCL-209ENST00000513148 GAGE12GP0CL81 117 aa11.74□□□□□ -0.53
HMGCL-209ENST00000513148 GAGE12IP0CL82 117 aa11.74□□□□□ -0.53
HMGCL-209ENST00000513148 GAGE4Q13068 117 aa11.74□□□□□ -0.53
HMGCL-209ENST00000513148 LAGE3Q14657 143 aa11.74□□□□□ -0.53
HMGCL-209ENST00000513148 Q6ZTC4 211 aa11.74□□□□□ -0.53
HMGCL-209ENST00000513148 C11orf21Q9P2W6 132 aa11.74□□□□□ -0.53
HMGCL-209ENST00000513148 C11orf72Q8NBR9 251 aa11.73□□□□□ -0.53
HMGCL-209ENST00000513148 K7EMI3 77 aa11.72□□□□□ -0.53
HMGCL-209ENST00000513148 DEFB130BP0DP73 79 aa11.72□□□□□ -0.53
HMGCL-209ENST00000513148 DEFB130AP0DP74 79 aa11.72□□□□□ -0.53
HMGCL-209ENST00000513148 GNRH2O43555 120 aa11.72□□□□□ -0.53
HMGCL-209ENST00000513148 MDFICQ9P1T7 246 aa11.72□□□□□ -0.53
HMGCL-209ENST00000513148 LYRM9A8MSI8 78 aa11.71□□□□□ -0.53
HMGCL-209ENST00000513148 FABP5P3A8MUU1 101 aa11.71□□□□□ -0.53
HMGCL-209ENST00000513148 DAD1P61803 113 aa11.71□□□□□ -0.53
HMGCL-209ENST00000513148 ZNF575Q86XF7 245 aa11.71□□□□□ -0.53
HMGCL-209ENST00000513148 TRGV11A0A075B6L2 103 aa11.7□□□□□ -0.54
HMGCL-209ENST00000513148 B5MCH6 92 aa11.7□□□□□ -0.54
HMGCL-209ENST00000513148 PSMB2P49721 201 aa11.7□□□□□ -0.54
HMGCL-209ENST00000513148 ZNF415Q09FC8 603 aa11.7□□□□□ -0.54
HMGCL-209ENST00000513148 C3orf84H3BNL1 204 aa11.7□□□□□ -0.54
HMGCL-209ENST00000513148 NDUFV3P56181 108 aaKnown RBP11.7□□□□□ -0.54
HMGCL-209ENST00000513148 GAGE2BQ13066 116 aa11.7□□□□□ -0.54
HMGCL-209ENST00000513148 GAGE2EQ4V326 116 aa11.7□□□□□ -0.54
HMGCL-209ENST00000513148 CASC10Q5T4H9 136 aa11.7□□□□□ -0.54
HMGCL-209ENST00000513148 GAGE2DQ9UEU5 116 aa11.7□□□□□ -0.54
HMGCL-209ENST00000513148 TMSB15BA0A087X1C1 80 aa11.69□□□□□ -0.54
HMGCL-209ENST00000513148 LINC01549A6NIU2 74 aa11.69□□□□□ -0.54
HMGCL-209ENST00000513148 ORM1P02763 201 aa11.69□□□□□ -0.54
HMGCL-209ENST00000513148 HTN3P15516 51 aa11.69□□□□□ -0.54
HMGCL-209ENST00000513148 Q6ZTI0 123 aa11.69□□□□□ -0.54
HMGCL-209ENST00000513148 STARD9Q9P2P6 4700 aa11.68□□□□□ -0.54
HMGCL-209ENST00000513148 TRGV1A0A0A0MS02 117 aa11.68□□□□□ -0.54
HMGCL-209ENST00000513148 IGKV3D-20A0A0C4DH25 116 aa11.68□□□□□ -0.54
HMGCL-209ENST00000513148 HERV-K104P63124 156 aa11.68□□□□□ -0.54
HMGCL-209ENST00000513148 DAZ2Q13117 558 aaKnown RBP11.68□□□□□ -0.54
HMGCL-209ENST00000513148 IGHV3-16A0A0C4DH30 117 aa11.67□□□□□ -0.54
HMGCL-209ENST00000513148 RPL32P62910 135 aaKnown RBP11.67□□□□□ -0.54
HMGCL-209ENST00000513148 NUPR2A6NF83 97 aa11.67□□□□□ -0.54
HMGCL-209ENST00000513148 SCGB1C2P0DMR2 95 aa11.67□□□□□ -0.54
HMGCL-209ENST00000513148 IFITM1P13164 125 aa11.67□□□□□ -0.54
HMGCL-209ENST00000513148 IGHV4-4A0A075B6R2 117 aa11.66□□□□□ -0.54
HMGCL-209ENST00000513148 DEFB131BA0A096LNP1 70 aa11.66□□□□□ -0.54
HMGCL-209ENST00000513148 TRAV10A0A0B4J240 114 aa11.66□□□□□ -0.54
HMGCL-209ENST00000513148 MRPL23Q16540 153 aaKnown RBP11.66□□□□□ -0.54
HMGCL-209ENST00000513148 ORMDL2Q53FV1 153 aa11.66□□□□□ -0.54
HMGCL-209ENST00000513148 CEMP1Q6PRD7 247 aaPredicted RBP11.66□□□□□ -0.54
HMGCL-209ENST00000513148 NRACQ8N912 160 aa11.66□□□□□ -0.54
HMGCL-209ENST00000513148 LOC107984156A0A0G2JMH3 177 aa11.65□□□□□ -0.54
HMGCL-209ENST00000513148 SNCGO76070 127 aa11.65□□□□□ -0.54
HMGCL-209ENST00000513148 ZFP2Q6ZN57 461 aa11.65□□□□□ -0.54
HMGCL-209ENST00000513148 ARL17AQ8IVW1 177 aa11.65□□□□□ -0.54
HMGCL-209ENST00000513148 TNFRSF18Q9Y5U5 241 aa11.65□□□□□ -0.54
HMGCL-209ENST00000513148 TRGV2A0A075B6R0 118 aa11.65□□□□□ -0.54
HMGCL-209ENST00000513148 S100A4P26447 101 aaKnown RBP11.65□□□□□ -0.54
HMGCL-209ENST00000513148 TTC32Q5I0X7 151 aa11.65□□□□□ -0.54
HMGCL-209ENST00000513148 NEXN-AS1Q8NBZ9 246 aa11.65□□□□□ -0.54
HMGCL-209ENST00000513148 TOMM6Q96B49 74 aa11.65□□□□□ -0.54
HMGCL-209ENST00000513148 MSRB1Q9NZV6 116 aa11.65□□□□□ -0.54
HMGCL-209ENST00000513148 TENM2Q9NT68 2774 aa11.65□□□□□ -0.54
HMGCL-209ENST00000513148 TCL1BO95988 128 aa11.64□□□□□ -0.55
HMGCL-209ENST00000513148 GAS8-AS1O95177 125 aa11.64□□□□□ -0.55
HMGCL-209ENST00000513148 PAPPA-AS1Q5QFB9 102 aa11.64□□□□□ -0.55
HMGCL-209ENST00000513148 ANKRD29Q8N6D5 301 aa11.64□□□□□ -0.55
HMGCL-209ENST00000513148 LINC00612Q8N6U2 182 aa11.64□□□□□ -0.55
HMGCL-209ENST00000513148 PTH2Q96A98 100 aa11.64□□□□□ -0.55
HMGCL-209ENST00000513148 SPANXDQ9BXN6 97 aa11.64□□□□□ -0.55
HMGCL-209ENST00000513148 RNASE3P12724 160 aaKnown RBP11.63□□□□□ -0.55
HMGCL-209ENST00000513148 SRSF9Q13242 221 aaKnown RBP eCLIP11.63□□□□□ -0.55
HMGCL-209ENST00000513148 C10orf126Q8N4M7 172 aa11.63□□□□□ -0.55
HMGCL-209ENST00000513148 SPXQ9BT56 116 aa11.63□□□□□ -0.55
HMGCL-209ENST00000513148 KLK5Q9Y337 293 aaPredicted RBP11.63□□□□□ -0.55
HMGCL-209ENST00000513148 H3BVH4 76 aa11.62□□□□□ -0.55
HMGCL-209ENST00000513148 ATP5G1P05496 136 aa11.62□□□□□ -0.55
HMGCL-209ENST00000513148 PRADC1Q9BSG0 188 aa11.62□□□□□ -0.55
HMGCL-209ENST00000513148 ZNF815PA8K554 130 aa11.62□□□□□ -0.55
HMGCL-209ENST00000513148 F5H768 121 aa11.62□□□□□ -0.55
HMGCL-209ENST00000513148 M0R2P5 195 aa11.62□□□□□ -0.55
HMGCL-209ENST00000513148 IGHV3-53P01767 116 aa11.62□□□□□ -0.55
HMGCL-209ENST00000513148 TMEM126AQ9H061 195 aa11.62□□□□□ -0.55
HMGCL-209ENST00000513148 RPL13AP40429 203 aaKnown RBP11.61□□□□□ -0.55
HMGCL-209ENST00000513148 C9orf85Q96MD7 179 aa11.61□□□□□ -0.55
HMGCL-209ENST00000513148 SCGB1D4Q6XE38 83 aa11.6□□□□□ -0.55
HMGCL-209ENST00000513148 MUC4Q99102 2169 aa11.6□□□□□ -0.55
HMGCL-209ENST00000513148 SLC25A20O43772 301 aa11.6□□□□□ -0.55
HMGCL-209ENST00000513148 P0DMU3 169 aa11.6□□□□□ -0.55
HMGCL-209ENST00000513148 FAM231AP0DMU4 169 aa11.6□□□□□ -0.55
HMGCL-209ENST00000513148 FAM231CP0DMU5 169 aa11.6□□□□□ -0.55
HMGCL-209ENST00000513148 GATA1P15976 413 aaPredicted RBP11.6□□□□□ -0.55
HMGCL-209ENST00000513148 SMIM20Q8N5G0 67 aa11.6□□□□□ -0.55
HMGCL-209ENST00000513148 SCGB3A1Q96QR1 104 aa11.6□□□□□ -0.55
HMGCL-209ENST00000513148 SMIM2Q9BVW6 85 aa11.6□□□□□ -0.55
HMGCL-209ENST00000513148 ZNF876PQ49A33 203 aa11.59□□□□□ -0.55
HMGCL-209ENST00000513148 RASL10AQ92737 203 aa11.59□□□□□ -0.55
HMGCL-209ENST00000513148 PRO1854Q9UHT4 67 aa11.59□□□□□ -0.55
HMGCL-209ENST00000513148 A0A0J9YY99 117 aa11.58□□□□□ -0.56
HMGCL-209ENST00000513148 CFC1BP0CG36 223 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms