RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 NTF3P20783 257 aa6.12□□□□□ -1.43
TRIO-220ENST00000512979 MIAQ16674 131 aa6.12□□□□□ -1.43
TRIO-220ENST00000512979 RASL11AQ6T310 242 aa6.12□□□□□ -1.43
TRIO-220ENST00000512979 ALKAL2Q6UX46 152 aa6.12□□□□□ -1.43
TRIO-220ENST00000512979 NTM-AS1Q6ZSK4 140 aa6.12□□□□□ -1.43
TRIO-220ENST00000512979 DEFB104AQ8WTQ1 72 aa6.12□□□□□ -1.43
TRIO-220ENST00000512979 EIF5A2Q9GZV4 153 aaKnown RBP6.12□□□□□ -1.43
TRIO-220ENST00000512979 RPP21Q9H633 154 aaKnown RBP6.12□□□□□ -1.43
TRIO-220ENST00000512979 KIF25-AS1Q9Y6Z4 181 aa6.12□□□□□ -1.43
TRIO-220ENST00000512979 TMEM250H0YL14 139 aa6.11□□□□□ -1.43
TRIO-220ENST00000512979 GATCO43716 136 aaKnown RBP6.11□□□□□ -1.43
TRIO-220ENST00000512979 IGLV2-8P01709 118 aa6.11□□□□□ -1.43
TRIO-220ENST00000512979 IGLC6P0CF74 106 aa6.11□□□□□ -1.43
TRIO-220ENST00000512979 NKX2-5P52952 324 aaPredicted RBP6.11□□□□□ -1.43
TRIO-220ENST00000512979 RBX1P62877 108 aa6.11□□□□□ -1.43
TRIO-220ENST00000512979 MAJINQ3KP22 176 aa6.11□□□□□ -1.43
TRIO-220ENST00000512979 CLPSL2Q6UWE3 100 aa6.11□□□□□ -1.43
TRIO-220ENST00000512979 C9orf62Q8N4C0 152 aa6.11□□□□□ -1.43
TRIO-220ENST00000512979 CIRBP-AS1Q8TBR5 109 aa6.11□□□□□ -1.43
TRIO-220ENST00000512979 TMEM243Q9BU79 118 aa6.11□□□□□ -1.43
TRIO-220ENST00000512979 NIT2Q9NQR4 276 aa6.11□□□□□ -1.43
TRIO-220ENST00000512979 A8MWL6 223 aa6.1□□□□□ -1.43
TRIO-220ENST00000512979 KRTAP29-1A8MX34 341 aaPredicted RBP6.1□□□□□ -1.43
TRIO-220ENST00000512979 M0QY20 66 aa6.1□□□□□ -1.43
TRIO-220ENST00000512979 COTL1Q14019 142 aa6.1□□□□□ -1.43
TRIO-220ENST00000512979 TEX261Q6UWH6 196 aa6.1□□□□□ -1.43
TRIO-220ENST00000512979 LINC00269Q8N2A0 174 aa6.1□□□□□ -1.43
TRIO-220ENST00000512979 RNASE7Q9H1E1 156 aaKnown RBP6.1□□□□□ -1.43
TRIO-220ENST00000512979 IQCJQ1A5X6 159 aa6.09□□□□□ -1.43
TRIO-220ENST00000512979 LINC00518Q8N0U6 118 aa6.09□□□□□ -1.43
TRIO-220ENST00000512979 PRR34Q9NV39 138 aa6.09□□□□□ -1.43
TRIO-220ENST00000512979 TRBV20OR9-2A0A075B6H5 130 aa6.08□□□□□ -1.44
TRIO-220ENST00000512979 TRAV8-4A0A0B4J246 113 aa6.08□□□□□ -1.44
TRIO-220ENST00000512979 KRTAP10-4P60372 401 aaPredicted RBP6.08□□□□□ -1.44
TRIO-220ENST00000512979 AMMECR1LQ6DCA0 310 aa6.08□□□□□ -1.44
TRIO-220ENST00000512979 SMIM7Q9BQ49 75 aa6.08□□□□□ -1.44
TRIO-220ENST00000512979 IGLV10-54A0A075B6I4 117 aa6.07□□□□□ -1.44
TRIO-220ENST00000512979 CTRLP40313 264 aa6.07□□□□□ -1.44
TRIO-220ENST00000512979 REG3AQ06141 175 aa6.07□□□□□ -1.44
TRIO-220ENST00000512979 KRTAP26-1Q6PEX3 210 aa6.07□□□□□ -1.44
TRIO-220ENST00000512979 DPH3Q96FX2 82 aa6.07□□□□□ -1.44
TRIO-220ENST00000512979 PGLYRP4Q96LB8 373 aa6.07□□□□□ -1.44
TRIO-220ENST00000512979 LRP1Q07954 4544 aaKnown RBP6.07□□□□□ -1.44
TRIO-220ENST00000512979 FAT3Q8TDW7 4589 aa6.06□□□□□ -1.44
TRIO-220ENST00000512979 ZNF727A8MUV8 499 aa6.06□□□□□ -1.44
TRIO-220ENST00000512979 K7EN84 100 aa6.06□□□□□ -1.44
TRIO-220ENST00000512979 PMCHP20382 165 aa6.06□□□□□ -1.44
TRIO-220ENST00000512979 RPL37AP61513 92 aaKnown RBP6.06□□□□□ -1.44
TRIO-220ENST00000512979 RIGQ13278 110 aa6.06□□□□□ -1.44
TRIO-220ENST00000512979 FAM231DQ6ZW35 169 aa6.06□□□□□ -1.44
TRIO-220ENST00000512979 C9orf163Q8N9P6 203 aa6.06□□□□□ -1.44
TRIO-220ENST00000512979 C20orf203Q8NBC4 194 aa6.06□□□□□ -1.44
TRIO-220ENST00000512979 IGLV4-60A0A075B6I1 120 aa6.05□□□□□ -1.44
TRIO-220ENST00000512979 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.05□□□□□ -1.44
TRIO-220ENST00000512979 NCR2O95944 276 aa6.05□□□□□ -1.44
TRIO-220ENST00000512979 APCSP02743 223 aa6.05□□□□□ -1.44
TRIO-220ENST00000512979 RNASEKQ6P5S7 137 aaKnown RBP6.05□□□□□ -1.44
TRIO-220ENST00000512979 TMEM101Q96IK0 257 aa6.05□□□□□ -1.44
TRIO-220ENST00000512979 BTF3L4Q96K17 158 aa6.05□□□□□ -1.44
TRIO-220ENST00000512979 CNFNQ9BYD5 112 aa6.05□□□□□ -1.44
TRIO-220ENST00000512979 GFRA4Q9GZZ7 299 aa6.05□□□□□ -1.44
TRIO-220ENST00000512979 TRAV26-2A0A0B4J265 109 aa6.04□□□□□ -1.44
TRIO-220ENST00000512979 IGKV3OR2-268A0A0C4DH90 116 aa6.04□□□□□ -1.44
TRIO-220ENST00000512979 A0A1B0GUT8 65 aa6.04□□□□□ -1.44
TRIO-220ENST00000512979 NDUFS6O75380 124 aaKnown RBP6.04□□□□□ -1.44
TRIO-220ENST00000512979 OXTP01178 125 aa6.04□□□□□ -1.44
TRIO-220ENST00000512979 TMEM241Q24JQ0 296 aa6.04□□□□□ -1.44
TRIO-220ENST00000512979 FAM74A3Q4VXF1 159 aa6.04□□□□□ -1.44
TRIO-220ENST00000512979 LCE1DQ5T752 114 aa6.04□□□□□ -1.44
TRIO-220ENST00000512979 Q8N9P0 234 aaPredicted RBP6.04□□□□□ -1.44
TRIO-220ENST00000512979 GATD1Q8NB37 220 aa6.04□□□□□ -1.44
TRIO-220ENST00000512979 LYPD6BQ8NI32 183 aa6.04□□□□□ -1.44
TRIO-220ENST00000512979 FAM210AQ96ND0 272 aa6.04□□□□□ -1.44
TRIO-220ENST00000512979 ST20Q9HBF5 79 aa6.04□□□□□ -1.44
TRIO-220ENST00000512979 PKHD1L1Q86WI1 4243 aa6.03□□□□□ -1.44
TRIO-220ENST00000512979 IGKV2D-30A0A075B6S6 120 aa6.03□□□□□ -1.44
TRIO-220ENST00000512979 FAM231BA6NCW3 169 aa6.03□□□□□ -1.44
TRIO-220ENST00000512979 SDHAF1A6NFY7 115 aa6.03□□□□□ -1.44
TRIO-220ENST00000512979 HIGD1CA8MV81 97 aa6.03□□□□□ -1.44
TRIO-220ENST00000512979 H7C423 109 aa6.03□□□□□ -1.44
TRIO-220ENST00000512979 PANO1I0J062 215 aa6.03□□□□□ -1.44
TRIO-220ENST00000512979 I3L3M4 83 aa6.03□□□□□ -1.44
TRIO-220ENST00000512979 PPP1R17O96001 155 aa6.03□□□□□ -1.44
TRIO-220ENST00000512979 SMAGPQ0VAQ4 97 aa6.03□□□□□ -1.44
TRIO-220ENST00000512979 PEA15Q15121 130 aa6.03□□□□□ -1.44
TRIO-220ENST00000512979 SDIM1Q6ZPB5 146 aa6.03□□□□□ -1.44
TRIO-220ENST00000512979 TSKUQ8WUA8 353 aa6.03□□□□□ -1.44
TRIO-220ENST00000512979 GTSF1Q8WW33 167 aa6.03□□□□□ -1.44
TRIO-220ENST00000512979 OSTCQ9NRP0 149 aa6.03□□□□□ -1.44
TRIO-220ENST00000512979 CNBPP62633 177 aaKnown RBP6.02□□□□□ -1.45
TRIO-220ENST00000512979 LINC01551Q86U37 167 aa6.02□□□□□ -1.45
TRIO-220ENST00000512979 IGHV3-64A0A075B6Q5 118 aa6.01□□□□□ -1.45
TRIO-220ENST00000512979 SRP19P09132 144 aaKnown RBP6.01□□□□□ -1.45
TRIO-220ENST00000512979 ZNF25P17030 456 aaPredicted RBP6.01□□□□□ -1.45
TRIO-220ENST00000512979 FCER1GP30273 86 aa6.01□□□□□ -1.45
TRIO-220ENST00000512979 HNRNPA3P51991 378 aaKnown RBP6.01□□□□□ -1.45
TRIO-220ENST00000512979 FOXA3P55318 350 aaPredicted RBP6.01□□□□□ -1.45
TRIO-220ENST00000512979 ADIRFQ15847 76 aa6.01□□□□□ -1.45
TRIO-220ENST00000512979 Q6ZRP5 223 aa6.01□□□□□ -1.45
TRIO-220ENST00000512979 RPL39LQ96EH5 51 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms