RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 CCL3L1P16619 93 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 AKR1D1P51857 326 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 TCTAP57738 103 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 PRLHP81277 87 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 OR8B8Q15620 311 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 OR2T2Q6IF00 324 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 SLC25A26Q70HW3 274 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 FDCSPQ8NFU4 85 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 COX7B2Q8TF08 81 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 IFI27L1Q96BM0 104 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 SELENOSQ9BQE4 189 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 TP53AIP1Q9HCN2 124 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 SCP2D1Q9UJQ7 156 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 TRAPPC2LQ9UL33 140 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 UFC1Q9Y3C8 167 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 KIF13AQ9H1H9 1805 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 QRICH2Q9H0J4 1663 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 PLXNC1O60486 1568 aa-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.53□□□□□ -2.49
PDGFC-208ENST00000512711 TULP4Q9NRJ4 1543 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 MUC22E2RYF6 1773 aaPredicted RBP-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 CHD1O14646 1710 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 LOC107984640A0A0U1RRK4 108 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 A0A1B0GW64 132 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 A8MTW9 85 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 APOC4-APOC2K7ER74 178 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 NPFFO15130 113 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 SLC25A5P05141 298 aaKnown RBP-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 SLC25A6P12236 298 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 NPC2P61916 151 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 PLGLB1Q02325 96 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 DCUN1D2Q6PH85 259 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 CCDC32Q9BV29 185 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 LINC00472Q9H8W2 130 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 CBLN4Q9NTU7 201 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 TAS2R8Q9NYW2 309 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 NDUFAF1Q9Y375 327 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 CROCC2H7BZ55 1655 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 ZNF831Q5JPB2 1677 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 NRXN3Q9Y4C0 1643 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 HMGXB3Q12766 1538 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 ARHGEF12Q9NZN5 1544 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 FER1L6Q2WGJ9 1857 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 GOLGA3Q08378 1498 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 PSME4Q14997 1843 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 WNK3Q9BYP7 1800 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 ARFGEF1Q9Y6D6 1849 aa-0.54□□□□□ -2.5
PDGFC-208ENST00000512711 DISP2A7MBM2 1401 aa-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 CRYBG1Q9Y4K1 1723 aa-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 TRAV1-2A0A0B4J238 106 aa-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 TRBV7-6A0A0J9YX20 115 aa-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 TRBV10-3A0A0K0K1G6 114 aa-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 G3V318 75 aa-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 PGRMC1O00264 195 aaKnown RBP-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 UQCRQO14949 82 aa-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 TCRAP04437 139 aa-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 HIST1H1BP16401 226 aaKnown RBP-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 SPRR1BP22528 89 aa-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 SERPINB1P30740 379 aa-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 PSPHP78330 225 aa-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 HSD17B12Q53GQ0 312 aa-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 DEFB121Q5J5C9 76 aa-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 TMED4Q7Z7H5 227 aa-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 STX12Q86Y82 276 aa-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 SNX29P2Q8IUI4 249 aa-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 SDF2Q99470 211 aa-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 SLC35B3Q9H1N7 401 aa-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 NPVFQ9HCQ7 196 aa-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 MED31Q9Y3C7 131 aa-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 SPCS1Q9Y6A9 102 aa-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 MAST1Q9Y2H9 1570 aa-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 PTPRMP28827 1452 aa-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 NCOA3Q9Y6Q9 1424 aa-0.55□□□□□ -2.5
PDGFC-208ENST00000512711 CUL7Q14999 1698 aa-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 PREX2Q70Z35 1606 aa-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 CCDC171Q6TFL3 1326 aa-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 PHIPQ8WWQ0 1821 aa-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 TRBV20-1A0A075B6N2 111 aa-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 H0YGG7 62 aa-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 PFDN1O60925 122 aa-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 RPL22P35268 128 aaKnown RBP-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 H1FX-AS1Q4G0G2 97 aa-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 NDUFA11Q86Y39 141 aa-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 DYNLRB2Q8TF09 96 aa-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 PRO3102Q9H379 93 aa-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 METTL1Q9UBP6 276 aaKnown RBP-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 STOML2Q9UJZ1 356 aa-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 ERG28Q9UKR5 140 aa-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 NOP16Q9Y3C1 178 aaKnown RBP-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 PRDM15P57071 1507 aaPredicted RBP-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 MAP3K1Q13233 1512 aa-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 CASZ1Q86V15 1759 aa-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 NRAPQ86VF7 1730 aa-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 NRXN2Q9P2S2 1712 aa-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 A2MP01023 1474 aa-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 ERVK-7P63135 1459 aa-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 WDR7Q9Y4E6 1490 aa-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 RIMS1Q86UR5 1692 aaKnown RBP-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 YTHDC2Q9H6S0 1430 aaKnown RBP-0.56□□□□□ -2.5
PDGFC-208ENST00000512711 TMEM131LA2VDJ0 1609 aa-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 179.7 ms