RNA–Protein interactions for RNA: ENST00000512526.1

SGCA-208, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-208ENST00000512526 CDC42SE2Q9NRR3 84 aa10.45□□□□□ -0.74
SGCA-208ENST00000512526 UBE2D4Q9Y2X8 147 aa10.45□□□□□ -0.74
SGCA-208ENST00000512526 TRAPPC1Q9Y5R8 145 aa10.45□□□□□ -0.74
SGCA-208ENST00000512526 RAB5AP20339 215 aa10.44□□□□□ -0.74
SGCA-208ENST00000512526 IFI27P40305 119 aaPredicted RBP10.44□□□□□ -0.74
SGCA-208ENST00000512526 OR5A1Q8NGJ0 315 aa10.44□□□□□ -0.74
SGCA-208ENST00000512526 TMEM18Q96B42 140 aa10.44□□□□□ -0.74
SGCA-208ENST00000512526 TMEM101Q96IK0 257 aa10.44□□□□□ -0.74
SGCA-208ENST00000512526 TIMM21Q9BVV7 248 aa10.44□□□□□ -0.74
SGCA-208ENST00000512526 NXT2Q9NPJ8 142 aaKnown RBP10.44□□□□□ -0.74
SGCA-208ENST00000512526 TRAV8-4A0A0B4J246 113 aa10.43□□□□□ -0.74
SGCA-208ENST00000512526 RPL39P62891 51 aaKnown RBP10.43□□□□□ -0.74
SGCA-208ENST00000512526 ZNF664Q8N3J9 261 aa10.43□□□□□ -0.74
SGCA-208ENST00000512526 K7EMI3 77 aa10.42□□□□□ -0.74
SGCA-208ENST00000512526 KRTAP10-2P60368 255 aa10.42□□□□□ -0.74
SGCA-208ENST00000512526 SMAGPQ0VAQ4 97 aa10.42□□□□□ -0.74
SGCA-208ENST00000512526 WFDC2Q14508 124 aa10.42□□□□□ -0.74
SGCA-208ENST00000512526 SPATA12Q7Z6I5 190 aa10.42□□□□□ -0.74
SGCA-208ENST00000512526 BAALCQ8WXS3 180 aa10.42□□□□□ -0.74
SGCA-208ENST00000512526 FAM104AQ969W3 186 aa10.42□□□□□ -0.74
SGCA-208ENST00000512526 DNAH5Q8TE73 4624 aa10.42□□□□□ -0.74
SGCA-208ENST00000512526 IGLV10-54A0A075B6I4 117 aa10.41□□□□□ -0.74
SGCA-208ENST00000512526 EREGO14944 169 aa10.41□□□□□ -0.74
SGCA-208ENST00000512526 DGAT2L7PQ6IED9 249 aa10.41□□□□□ -0.74
SGCA-208ENST00000512526 LINC01546A6NGU7 62 aa10.4□□□□□ -0.74
SGCA-208ENST00000512526 ORMDL2Q53FV1 153 aa10.4□□□□□ -0.74
SGCA-208ENST00000512526 SPANXA1Q9NS26 97 aa10.4□□□□□ -0.74
SGCA-208ENST00000512526 PGPEP1Q9NXJ5 209 aa10.4□□□□□ -0.74
SGCA-208ENST00000512526 LRP1BQ9NZR2 4599 aa10.4□□□□□ -0.74
SGCA-208ENST00000512526 IGKV3OR2-268A0A0C4DH90 116 aa10.39□□□□□ -0.75
SGCA-208ENST00000512526 LINC00959A0A1B0GUT2 108 aa10.39□□□□□ -0.75
SGCA-208ENST00000512526 Q8N814 137 aa10.39□□□□□ -0.75
SGCA-208ENST00000512526 PRSS3P2Q8NHM4 247 aa10.39□□□□□ -0.75
SGCA-208ENST00000512526 PYGO1Q9Y3Y4 419 aa10.39□□□□□ -0.75
SGCA-208ENST00000512526 COLCA2A8K830 154 aa10.38□□□□□ -0.75
SGCA-208ENST00000512526 LECT2O14960 151 aa10.38□□□□□ -0.75
SGCA-208ENST00000512526 MRPS36P82909 103 aaKnown RBP10.38□□□□□ -0.75
SGCA-208ENST00000512526 Q6ZUT4 128 aa10.38□□□□□ -0.75
SGCA-208ENST00000512526 RYR1P21817 5038 aa10.38□□□□□ -0.75
SGCA-208ENST00000512526 FUSP35637 526 aaKnown RBP eCLIP10.37□□□□□ -0.75
SGCA-208ENST00000512526 C2orf66Q6UXQ4 117 aa10.37□□□□□ -0.75
SGCA-208ENST00000512526 CHCHD10Q8WYQ3 142 aaPredicted RBP10.37□□□□□ -0.75
SGCA-208ENST00000512526 OPRPNQ99935 248 aaPredicted RBP10.37□□□□□ -0.75
SGCA-208ENST00000512526 RNASE13Q5GAN3 156 aaKnown RBP10.36□□□□□ -0.75
SGCA-208ENST00000512526 C18orf32Q8TCD1 76 aa10.36□□□□□ -0.75
SGCA-208ENST00000512526 CYSLTR1Q9Y271 337 aa10.36□□□□□ -0.75
SGCA-208ENST00000512526 GAGE12HA6NDE8 117 aa10.35□□□□□ -0.75
SGCA-208ENST00000512526 IGIPA6NJ69 53 aa10.35□□□□□ -0.75
SGCA-208ENST00000512526 SCO1O75880 301 aa10.35□□□□□ -0.75
SGCA-208ENST00000512526 G0S2P27469 103 aa10.35□□□□□ -0.75
SGCA-208ENST00000512526 CDPF1Q6NVV7 123 aa10.35□□□□□ -0.75
SGCA-208ENST00000512526 URB1-AS1Q96HZ7 61 aa10.35□□□□□ -0.75
SGCA-208ENST00000512526 IGLV4-3A0A075B6K6 122 aa10.34□□□□□ -0.75
SGCA-208ENST00000512526 C16orf90A8MZG2 172 aa10.34□□□□□ -0.75
SGCA-208ENST00000512526 USP17L23D6RBM5 183 aa10.34□□□□□ -0.75
SGCA-208ENST00000512526 CCL25O15444 150 aa10.34□□□□□ -0.75
SGCA-208ENST00000512526 FOXI1Q12951 378 aa10.34□□□□□ -0.75
SGCA-208ENST00000512526 SS18Q15532 418 aa10.34□□□□□ -0.75
SGCA-208ENST00000512526 NTN5Q8WTR8 489 aaPredicted RBP10.34□□□□□ -0.75
SGCA-208ENST00000512526 TOMM6Q96B49 74 aa10.34□□□□□ -0.75
SGCA-208ENST00000512526 C1orf196B1AJZ1 125 aa10.33□□□□□ -0.76
SGCA-208ENST00000512526 NPSP0C0P6 89 aa10.33□□□□□ -0.76
SGCA-208ENST00000512526 LINC00614P0C842 121 aa10.33□□□□□ -0.76
SGCA-208ENST00000512526 FA2HQ7L5A8 372 aa10.33□□□□□ -0.76
SGCA-208ENST00000512526 TRAV13-1A0A0B4J241 112 aa10.32□□□□□ -0.76
SGCA-208ENST00000512526 TRGC2P03986 189 aa10.32□□□□□ -0.76
SGCA-208ENST00000512526 XCL1P47992 114 aa10.32□□□□□ -0.76
SGCA-208ENST00000512526 CD164L2Q6UWJ8 174 aa10.32□□□□□ -0.76
SGCA-208ENST00000512526 PRSS1P07477 247 aa10.31□□□□□ -0.76
SGCA-208ENST00000512526 C14orf177Q52M58 125 aa10.31□□□□□ -0.76
SGCA-208ENST00000512526 TMEM141Q96I45 108 aa10.31□□□□□ -0.76
SGCA-208ENST00000512526 AMELXQ99217 191 aa10.31□□□□□ -0.76
SGCA-208ENST00000512526 AP5S1Q9NUS5 200 aa10.31□□□□□ -0.76
SGCA-208ENST00000512526 KIAA1109Q2LD37 5005 aa10.3□□□□□ -0.76
SGCA-208ENST00000512526 ERASQ7Z444 233 aa10.3□□□□□ -0.76
SGCA-208ENST00000512526 TIMM17AQ99595 171 aa10.3□□□□□ -0.76
SGCA-208ENST00000512526 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.29□□□□□ -0.76
SGCA-208ENST00000512526 A0A096LNJ9 63 aa10.29□□□□□ -0.76
SGCA-208ENST00000512526 IGLV5-52A0A0A0MRZ9 124 aa10.29□□□□□ -0.76
SGCA-208ENST00000512526 LINC01549A6NIU2 74 aa10.29□□□□□ -0.76
SGCA-208ENST00000512526 RAB5BP61020 215 aa10.29□□□□□ -0.76
SGCA-208ENST00000512526 LINC00173Q6ZV60 143 aa10.29□□□□□ -0.76
SGCA-208ENST00000512526 DNAH8Q96JB1 4490 aa10.29□□□□□ -0.76
SGCA-208ENST00000512526 IFITM10A6NMD0 228 aa10.28□□□□□ -0.76
SGCA-208ENST00000512526 ZC2HC1BQ5TFG8 222 aa10.28□□□□□ -0.76
SGCA-208ENST00000512526 CFAP161Q6P656 301 aa10.28□□□□□ -0.76
SGCA-208ENST00000512526 C15orf56Q8N910 161 aa10.28□□□□□ -0.76
SGCA-208ENST00000512526 SCGB3A1Q96QR1 104 aa10.28□□□□□ -0.76
SGCA-208ENST00000512526 VCX2Q9H322 139 aa10.28□□□□□ -0.76
SGCA-208ENST00000512526 GCSHP23434 173 aa10.27□□□□□ -0.77
SGCA-208ENST00000512526 KRTAP10-1P60331 282 aa10.27□□□□□ -0.77
SGCA-208ENST00000512526 TEX43Q6ZNM6 134 aa10.27□□□□□ -0.77
SGCA-208ENST00000512526 APOBP04114 4563 aaKnown RBP10.26□□□□□ -0.77
SGCA-208ENST00000512526 IGHV3OR16-9A0A0B4J2B5 98 aa10.26□□□□□ -0.77
SGCA-208ENST00000512526 SLPIP03973 132 aa10.26□□□□□ -0.77
SGCA-208ENST00000512526 S100A1P23297 94 aa10.26□□□□□ -0.77
SGCA-208ENST00000512526 UBE2D1P51668 147 aa10.26□□□□□ -0.77
SGCA-208ENST00000512526 Q6ZN92 141 aa10.26□□□□□ -0.77
SGCA-208ENST00000512526 PAPPA-AS1Q5QFB9 102 aa10.25□□□□□ -0.77
SGCA-208ENST00000512526 LINC00242Q5T6M2 205 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms