RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340		M0R2N4	97 aa		5.16	□□□□□ -1.58
NR1I3-231	ENST00000512340	PPP1R17	O96001	155 aa		5.16	□□□□□ -1.58
NR1I3-231	ENST00000512340	FOXA3	P55318	350 aa	Predicted RBP	5.16	□□□□□ -1.58
NR1I3-231	ENST00000512340	RPL23	P62829	140 aa	Known RBP	5.16	□□□□□ -1.58
NR1I3-231	ENST00000512340	SEC11A	P67812	179 aa		5.16	□□□□□ -1.58
NR1I3-231	ENST00000512340	DAZ4	Q86SG3	579 aa	Known RBP	5.16	□□□□□ -1.58
NR1I3-231	ENST00000512340	PGLYRP4	Q96LB8	373 aa		5.16	□□□□□ -1.58
NR1I3-231	ENST00000512340	CNFN	Q9BYD5	112 aa		5.16	□□□□□ -1.58
NR1I3-231	ENST00000512340	JPT2	Q9H910	190 aa		5.16	□□□□□ -1.58
NR1I3-231	ENST00000512340	DAZ3	Q9NR90	486 aa	Known RBP	5.16	□□□□□ -1.58
NR1I3-231	ENST00000512340	PCLO	Q9Y6V0	5065 aa		5.16	□□□□□ -1.58
NR1I3-231	ENST00000512340	HERC2	O95714	4834 aa		5.16	□□□□□ -1.58
NR1I3-231	ENST00000512340	IGHV3-38	A0A0C4DH36	116 aa		5.15	□□□□□ -1.59
NR1I3-231	ENST00000512340	HIGD1C	A8MV81	97 aa		5.15	□□□□□ -1.59
NR1I3-231	ENST00000512340	ZNF561-AS1	K7EIQ3	104 aa		5.15	□□□□□ -1.59
NR1I3-231	ENST00000512340	C6orf226	Q5I0X4	101 aa		5.15	□□□□□ -1.59
NR1I3-231	ENST00000512340	RASL11A	Q6T310	242 aa		5.15	□□□□□ -1.59
NR1I3-231	ENST00000512340		Q6ZVH6	145 aa		5.15	□□□□□ -1.59
NR1I3-231	ENST00000512340	C6orf223	Q8N319	242 aa		5.15	□□□□□ -1.59
NR1I3-231	ENST00000512340	ST20	Q9HBF5	79 aa		5.15	□□□□□ -1.59
NR1I3-231	ENST00000512340	LOC100131303	A0A0U1RQF7	123 aa		5.14	□□□□□ -1.59
NR1I3-231	ENST00000512340		H3BRM9	83 aa		5.14	□□□□□ -1.59
NR1I3-231	ENST00000512340		J3KT08	172 aa		5.14	□□□□□ -1.59
NR1I3-231	ENST00000512340	SPINK8	P0C7L1	97 aa		5.14	□□□□□ -1.59
NR1I3-231	ENST00000512340	BVES-AS1	Q5T3Y7	98 aa		5.14	□□□□□ -1.59
NR1I3-231	ENST00000512340	CHCHD7	Q9BUK0	85 aa		5.14	□□□□□ -1.59
NR1I3-231	ENST00000512340	SPANXB1	Q9NS25	103 aa	Predicted RBP	5.14	□□□□□ -1.59
NR1I3-231	ENST00000512340		V9GYY9	64 aa		5.14	□□□□□ -1.59
NR1I3-231	ENST00000512340	PLEC	Q15149	4684 aa	Known RBP	5.14	□□□□□ -1.59
NR1I3-231	ENST00000512340	TRBV25-1	A0A075B6N4	114 aa		5.13	□□□□□ -1.59
NR1I3-231	ENST00000512340	C9orf118	A6NHY6	69 aa		5.13	□□□□□ -1.59
NR1I3-231	ENST00000512340	DNAH10OS	P0CZ25	163 aa		5.13	□□□□□ -1.59
NR1I3-231	ENST00000512340	UBE2D3	P61077	147 aa		5.13	□□□□□ -1.59
NR1I3-231	ENST00000512340	UBE2D2	P62837	147 aa		5.13	□□□□□ -1.59
NR1I3-231	ENST00000512340	LINC01556	Q5JQF7	62 aa		5.13	□□□□□ -1.59
NR1I3-231	ENST00000512340		Q6ZR54	194 aa		5.13	□□□□□ -1.59
NR1I3-231	ENST00000512340		Q6ZSN1	163 aa		5.13	□□□□□ -1.59
NR1I3-231	ENST00000512340	ZNF575	Q86XF7	245 aa		5.13	□□□□□ -1.59
NR1I3-231	ENST00000512340	RMI2	Q96E14	147 aa		5.13	□□□□□ -1.59
NR1I3-231	ENST00000512340	MSRB1	Q9NZV6	116 aa		5.13	□□□□□ -1.59
NR1I3-231	ENST00000512340		V9GYV3	84 aa		5.13	□□□□□ -1.59
NR1I3-231	ENST00000512340	TRAV8-3	A0A0A6YYJ7	113 aa		5.12	□□□□□ -1.59
NR1I3-231	ENST00000512340	TMEM262	E9PQX1	116 aa		5.12	□□□□□ -1.59
NR1I3-231	ENST00000512340		F8W1H4	67 aa		5.12	□□□□□ -1.59
NR1I3-231	ENST00000512340	UBE2L6	O14933	153 aa		5.12	□□□□□ -1.59
NR1I3-231	ENST00000512340	PSCA	O43653	123 aa		5.12	□□□□□ -1.59
NR1I3-231	ENST00000512340	PMVK	Q15126	192 aa		5.12	□□□□□ -1.59
NR1I3-231	ENST00000512340	SUMO4	Q6EEV6	95 aa		5.12	□□□□□ -1.59
NR1I3-231	ENST00000512340	ATP5L2	Q7Z4Y8	100 aa		5.12	□□□□□ -1.59
NR1I3-231	ENST00000512340	NEXN-AS1	Q8NBZ9	246 aa		5.12	□□□□□ -1.59
NR1I3-231	ENST00000512340	GTSF1	Q8WW33	167 aa		5.12	□□□□□ -1.59
NR1I3-231	ENST00000512340	PMCHL2	Q9BQD1	86 aa		5.12	□□□□□ -1.59
NR1I3-231	ENST00000512340	CHCHD5	Q9BSY4	110 aa		5.12	□□□□□ -1.59
NR1I3-231	ENST00000512340	TM2D2	Q9BX73	214 aa		5.12	□□□□□ -1.59
NR1I3-231	ENST00000512340	TMEM191A	Q9H0A3	160 aa		5.12	□□□□□ -1.59
NR1I3-231	ENST00000512340	KIF25-AS1	Q9Y6Z4	181 aa		5.12	□□□□□ -1.59
NR1I3-231	ENST00000512340	FRAS1	Q86XX4	4008 aa		5.12	□□□□□ -1.59
NR1I3-231	ENST00000512340	RYR1	P21817	5038 aa		5.12	□□□□□ -1.59
NR1I3-231	ENST00000512340	ALMS1	Q8TCU4	4167 aa		5.11	□□□□□ -1.59
NR1I3-231	ENST00000512340	TRBV6-8	A0A0A6YYG3	113 aa		5.11	□□□□□ -1.59
NR1I3-231	ENST00000512340	IGHV1-24	A0A0C4DH33	117 aa		5.11	□□□□□ -1.59
NR1I3-231	ENST00000512340	SMIM27	A0A1W2PRY6	76 aa		5.11	□□□□□ -1.59
NR1I3-231	ENST00000512340	PRSS29P	A6NIE9	313 aa		5.11	□□□□□ -1.59
NR1I3-231	ENST00000512340		M0QY20	66 aa		5.11	□□□□□ -1.59
NR1I3-231	ENST00000512340	NCR2	O95944	276 aa		5.11	□□□□□ -1.59
NR1I3-231	ENST00000512340	LINC00694	P0DN24	101 aa		5.11	□□□□□ -1.59
NR1I3-231	ENST00000512340	HBB	P68871	147 aa		5.11	□□□□□ -1.59
NR1I3-231	ENST00000512340	LAGE3	Q14657	143 aa		5.11	□□□□□ -1.59
NR1I3-231	ENST00000512340		Q6Q795	121 aa		5.11	□□□□□ -1.59
NR1I3-231	ENST00000512340	WFDC10B	Q8IUB3	73 aa		5.11	□□□□□ -1.59
NR1I3-231	ENST00000512340		Q8N976	141 aa		5.11	□□□□□ -1.59
NR1I3-231	ENST00000512340	NUP35	Q8NFH5	326 aa		5.11	□□□□□ -1.59
NR1I3-231	ENST00000512340	SPANXD	Q9BXN6	97 aa		5.11	□□□□□ -1.59
NR1I3-231	ENST00000512340	MAP1LC3A	Q9H492	121 aa		5.11	□□□□□ -1.59
NR1I3-231	ENST00000512340		A0A0U1RRA0	63 aa		5.1	□□□□□ -1.59
NR1I3-231	ENST00000512340	HSBP1	O75506	76 aa		5.1	□□□□□ -1.59
NR1I3-231	ENST00000512340	IGHV3-30	P01768	117 aa		5.1	□□□□□ -1.59
NR1I3-231	ENST00000512340	IGHV3-33	P01772	117 aa		5.1	□□□□□ -1.59
NR1I3-231	ENST00000512340	CRP	P02741	224 aa		5.1	□□□□□ -1.59
NR1I3-231	ENST00000512340	IGHV3-30-3	P0DP02	117 aa		5.1	□□□□□ -1.59
NR1I3-231	ENST00000512340	IGHV3-30-5	P0DP03	117 aa		5.1	□□□□□ -1.59
NR1I3-231	ENST00000512340	CAMP	P49913	170 aa		5.1	□□□□□ -1.59
NR1I3-231	ENST00000512340	LINC00315	P59091	139 aa		5.1	□□□□□ -1.59
NR1I3-231	ENST00000512340		Q0VG73	95 aa		5.1	□□□□□ -1.59
NR1I3-231	ENST00000512340	TMEM243	Q9BU79	118 aa		5.1	□□□□□ -1.59
NR1I3-231	ENST00000512340	C1orf43	Q9BWL3	253 aa		5.1	□□□□□ -1.59
NR1I3-231	ENST00000512340	PRO0628	Q9UI54	55 aa		5.1	□□□□□ -1.59
NR1I3-231	ENST00000512340	TRAV9-1	A0A075B6T8	112 aa		5.09	□□□□□ -1.59
NR1I3-231	ENST00000512340	TINCR	A0A1B0GVN0	87 aa		5.09	□□□□□ -1.59
NR1I3-231	ENST00000512340	MAL	P21145	153 aa		5.09	□□□□□ -1.59
NR1I3-231	ENST00000512340	CKS2	P33552	79 aa		5.09	□□□□□ -1.59
NR1I3-231	ENST00000512340	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	5.09	□□□□□ -1.59
NR1I3-231	ENST00000512340	GATD1	Q8NB37	220 aa		5.09	□□□□□ -1.59
NR1I3-231	ENST00000512340	KIR2DL4	Q99706	377 aa		5.09	□□□□□ -1.59
NR1I3-231	ENST00000512340	TRBV6-5	A0A0K0K1A5	114 aa		5.08	□□□□□ -1.6
NR1I3-231	ENST00000512340	IBA57-AS1	B1ANH7	110 aa		5.08	□□□□□ -1.6
NR1I3-231	ENST00000512340		H7C423	109 aa		5.08	□□□□□ -1.6
NR1I3-231	ENST00000512340		I3L3M4	83 aa		5.08	□□□□□ -1.6
NR1I3-231	ENST00000512340	VCY	O14598	125 aa		5.08	□□□□□ -1.6
NR1I3-231	ENST00000512340	APCS	P02743	223 aa		5.08	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms