RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 C20orf78Q9BR46 151 aa3.46□□□□□ -1.86
MSH3-202ENST00000512258 CHCHD7Q9BUK0 85 aa3.46□□□□□ -1.86
MSH3-202ENST00000512258 MAP1LC3AQ9H492 121 aa3.46□□□□□ -1.86
MSH3-202ENST00000512258 DAZ3Q9NR90 486 aaKnown RBP3.46□□□□□ -1.86
MSH3-202ENST00000512258 MRPS16Q9Y3D3 137 aaKnown RBP3.46□□□□□ -1.86
MSH3-202ENST00000512258 VCYO14598 125 aa3.45□□□□□ -1.86
MSH3-202ENST00000512258 NUPR1O60356 82 aa3.45□□□□□ -1.86
MSH3-202ENST00000512258 PPP1R17O96001 155 aa3.45□□□□□ -1.86
MSH3-202ENST00000512258 IGHV3-30P01768 117 aa3.45□□□□□ -1.86
MSH3-202ENST00000512258 IGHV3-33P01772 117 aa3.45□□□□□ -1.86
MSH3-202ENST00000512258 IGHV3-30-3P0DP02 117 aa3.45□□□□□ -1.86
MSH3-202ENST00000512258 IGHV3-30-5P0DP03 117 aa3.45□□□□□ -1.86
MSH3-202ENST00000512258 ESDP10768 282 aa3.45□□□□□ -1.86
MSH3-202ENST00000512258 AMTP48728 403 aa3.45□□□□□ -1.86
MSH3-202ENST00000512258 CCL18P55774 89 aa3.45□□□□□ -1.86
MSH3-202ENST00000512258 TCTAP57738 103 aa3.45□□□□□ -1.86
MSH3-202ENST00000512258 TIRAPP58753 221 aa3.45□□□□□ -1.86
MSH3-202ENST00000512258 RPL39P62891 51 aaKnown RBP3.45□□□□□ -1.86
MSH3-202ENST00000512258 RPL32P62910 135 aaKnown RBP3.45□□□□□ -1.86
MSH3-202ENST00000512258 GAGE6Q13070 117 aa3.45□□□□□ -1.86
MSH3-202ENST00000512258 PMCHL1Q16048 86 aa3.45□□□□□ -1.86
MSH3-202ENST00000512258 LELP1Q5T871 98 aa3.45□□□□□ -1.86
MSH3-202ENST00000512258 SH2D6Q7Z4S9 175 aa3.45□□□□□ -1.86
MSH3-202ENST00000512258 UBE2DNLQ8IWF7 75 aa3.45□□□□□ -1.86
MSH3-202ENST00000512258 Q8N8P6 123 aa3.45□□□□□ -1.86
MSH3-202ENST00000512258 CHCHD5Q9BSY4 110 aa3.45□□□□□ -1.86
MSH3-202ENST00000512258 LAMTOR2Q9Y2Q5 125 aa3.45□□□□□ -1.86
MSH3-202ENST00000512258 IGLV4-60A0A075B6I1 120 aa3.44□□□□□ -1.86
MSH3-202ENST00000512258 TRBV25-1A0A075B6N4 114 aa3.44□□□□□ -1.86
MSH3-202ENST00000512258 A0A096LNJ9 63 aa3.44□□□□□ -1.86
MSH3-202ENST00000512258 IGHV1-24A0A0C4DH33 117 aa3.44□□□□□ -1.86
MSH3-202ENST00000512258 M0R2N4 97 aa3.44□□□□□ -1.86
MSH3-202ENST00000512258 HIST1H2BKO60814 126 aa3.44□□□□□ -1.86
MSH3-202ENST00000512258 HIST1H2BJP06899 126 aa3.44□□□□□ -1.86
MSH3-202ENST00000512258 HIST1H2BOP23527 126 aa3.44□□□□□ -1.86
MSH3-202ENST00000512258 FCER1GP30273 86 aa3.44□□□□□ -1.86
MSH3-202ENST00000512258 HIST1H2BBP33778 126 aa3.44□□□□□ -1.86
MSH3-202ENST00000512258 HIST1H2BDP58876 126 aa3.44□□□□□ -1.86
MSH3-202ENST00000512258 HIST1H2BCP62807 126 aa3.44□□□□□ -1.86
MSH3-202ENST00000512258 HIST2H2BEQ16778 126 aa3.44□□□□□ -1.86
MSH3-202ENST00000512258 MPV17L2Q567V2 206 aa3.44□□□□□ -1.86
MSH3-202ENST00000512258 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.44□□□□□ -1.86
MSH3-202ENST00000512258 LGALS9CQ6DKI2 356 aa3.44□□□□□ -1.86
MSH3-202ENST00000512258 RNASEKQ6P5S7 137 aaKnown RBP3.44□□□□□ -1.86
MSH3-202ENST00000512258 NIT1Q86X76 327 aa3.44□□□□□ -1.86
MSH3-202ENST00000512258 Q8N976 141 aa3.44□□□□□ -1.86
MSH3-202ENST00000512258 HIST1H2BHQ93079 126 aa3.44□□□□□ -1.86
MSH3-202ENST00000512258 FAM104AQ969W3 186 aa3.44□□□□□ -1.86
MSH3-202ENST00000512258 HIST1H2BNQ99877 126 aa3.44□□□□□ -1.86
MSH3-202ENST00000512258 HIST1H2BMQ99879 126 aa3.44□□□□□ -1.86
MSH3-202ENST00000512258 OPRPNQ99935 248 aaPredicted RBP3.44□□□□□ -1.86
MSH3-202ENST00000512258 UPK3BQ9BT76 320 aa3.44□□□□□ -1.86
MSH3-202ENST00000512258 TMEM243Q9BU79 118 aa3.44□□□□□ -1.86
MSH3-202ENST00000512258 Q9H8V8 135 aa3.44□□□□□ -1.86
MSH3-202ENST00000512258 NXT2Q9NPJ8 142 aaKnown RBP3.44□□□□□ -1.86
MSH3-202ENST00000512258 ALMS1Q8TCU4 4167 aa3.43□□□□□ -1.86
MSH3-202ENST00000512258 DNAH1Q9P2D7 4330 aa3.43□□□□□ -1.86
MSH3-202ENST00000512258 TRAV8-6A0A0B4J262 113 aa3.43□□□□□ -1.86
MSH3-202ENST00000512258 LCE6AA0A183 80 aa3.43□□□□□ -1.86
MSH3-202ENST00000512258 LINC01546A6NGU7 62 aa3.43□□□□□ -1.86
MSH3-202ENST00000512258 C1orf196B1AJZ1 125 aa3.43□□□□□ -1.86
MSH3-202ENST00000512258 TMEM262E9PQX1 116 aa3.43□□□□□ -1.86
MSH3-202ENST00000512258 SIVA1O15304 175 aa3.43□□□□□ -1.86
MSH3-202ENST00000512258 SERF1AO75920 110 aa3.43□□□□□ -1.86
MSH3-202ENST00000512258 LINC00614P0C842 121 aa3.43□□□□□ -1.86
MSH3-202ENST00000512258 FGF6P10767 208 aa3.43□□□□□ -1.86
MSH3-202ENST00000512258 RBX1P62877 108 aa3.43□□□□□ -1.86
MSH3-202ENST00000512258 Q0VG73 95 aa3.43□□□□□ -1.86
MSH3-202ENST00000512258 LAGE3Q14657 143 aa3.43□□□□□ -1.86
MSH3-202ENST00000512258 RNASE13Q5GAN3 156 aaKnown RBP3.43□□□□□ -1.86
MSH3-202ENST00000512258 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
MSH3-202ENST00000512258 ZC2HC1BQ5TFG8 222 aa3.43□□□□□ -1.86
MSH3-202ENST00000512258 FA2HQ7L5A8 372 aa3.43□□□□□ -1.86
MSH3-202ENST00000512258 BAGE3Q86Y29 109 aa3.43□□□□□ -1.86
MSH3-202ENST00000512258 C20orf203Q8NBC4 194 aa3.43□□□□□ -1.86
MSH3-202ENST00000512258 KIR2DL4Q99706 377 aa3.43□□□□□ -1.86
MSH3-202ENST00000512258 HYDINQ4G0P3 5121 aa3.42□□□□□ -1.86
MSH3-202ENST00000512258 KMT2CQ8NEZ4 4911 aaKnown RBP3.42□□□□□ -1.86
MSH3-202ENST00000512258 VPS13DQ5THJ4 4388 aa3.42□□□□□ -1.86
MSH3-202ENST00000512258 UBE2L6O14933 153 aa3.42□□□□□ -1.86
MSH3-202ENST00000512258 DNAH10OSP0CZ25 163 aa3.42□□□□□ -1.86
MSH3-202ENST00000512258 BTF3P20290 206 aaKnown RBP3.42□□□□□ -1.86
MSH3-202ENST00000512258 NDUFA6P56556 154 aa3.42□□□□□ -1.86
MSH3-202ENST00000512258 TMEM97Q5BJF2 176 aa3.42□□□□□ -1.86
MSH3-202ENST00000512258 LINC01556Q5JQF7 62 aa3.42□□□□□ -1.86
MSH3-202ENST00000512258 CLPSL2Q6UWE3 100 aa3.42□□□□□ -1.86
MSH3-202ENST00000512258 C2orf66Q6UXQ4 117 aa3.42□□□□□ -1.86
MSH3-202ENST00000512258 Q6ZUT4 128 aa3.42□□□□□ -1.86
MSH3-202ENST00000512258 LINC00173Q6ZV60 143 aa3.42□□□□□ -1.86
MSH3-202ENST00000512258 FAM19A2Q8N3H0 131 aa3.42□□□□□ -1.86
MSH3-202ENST00000512258 KLK12Q9UKR0 248 aa3.42□□□□□ -1.86
MSH3-202ENST00000512258 UBE2D4Q9Y2X8 147 aa3.42□□□□□ -1.86
MSH3-202ENST00000512258 RYR2Q92736 4967 aa3.41□□□□□ -1.86
MSH3-202ENST00000512258 A0A087WX48 190 aa3.41□□□□□ -1.86
MSH3-202ENST00000512258 IGKV3OR2-268A0A0C4DH90 116 aa3.41□□□□□ -1.86
MSH3-202ENST00000512258 NBDYA0A0U1RRE5 68 aa3.41□□□□□ -1.86
MSH3-202ENST00000512258 ANGP03950 147 aaKnown RBP3.41□□□□□ -1.86
MSH3-202ENST00000512258 ORMDL2Q53FV1 153 aa3.41□□□□□ -1.86
MSH3-202ENST00000512258 AMMECR1LQ6DCA0 310 aa3.41□□□□□ -1.86
MSH3-202ENST00000512258 ENHOQ6UWT2 76 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms