RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 CDC42SE2Q9NRR3 84 aa6.87□□□□□ -1.31
COPS4-210ENST00000511708 S100A9P06702 114 aaKnown RBP6.86□□□□□ -1.31
COPS4-210ENST00000511708 TRGC1P0CF51 173 aa6.86□□□□□ -1.31
COPS4-210ENST00000511708 CFC1BP0CG36 223 aa6.86□□□□□ -1.31
COPS4-210ENST00000511708 MT1HP80294 61 aa6.86□□□□□ -1.31
COPS4-210ENST00000511708 BAGE2Q86Y30 109 aa6.86□□□□□ -1.31
COPS4-210ENST00000511708 LINC00304Q8N9R0 145 aa6.86□□□□□ -1.31
COPS4-210ENST00000511708 TPPP3Q9BW30 176 aa6.86□□□□□ -1.31
COPS4-210ENST00000511708 INMT-MINDY4F8WBC2 141 aa6.85□□□□□ -1.31
COPS4-210ENST00000511708 TSHBP01222 138 aa6.85□□□□□ -1.31
COPS4-210ENST00000511708 CTAG1AP78358 180 aa6.85□□□□□ -1.31
COPS4-210ENST00000511708 SPAG11BQ08648 103 aa6.85□□□□□ -1.31
COPS4-210ENST00000511708 KRTAP19-2Q3LHN2 52 aa6.85□□□□□ -1.31
COPS4-210ENST00000511708 MZT2BQ6NZ67 158 aa6.85□□□□□ -1.31
COPS4-210ENST00000511708 MRPL52Q86TS9 123 aaKnown RBP6.85□□□□□ -1.31
COPS4-210ENST00000511708 OR2D3Q8NGH3 330 aa6.85□□□□□ -1.31
COPS4-210ENST00000511708 STOML3Q8TAV4 291 aa6.85□□□□□ -1.31
COPS4-210ENST00000511708 CCDC32Q9BV29 185 aa6.85□□□□□ -1.31
COPS4-210ENST00000511708 C1orf196B1AJZ1 125 aa6.84□□□□□ -1.31
COPS4-210ENST00000511708 CST9LP1Q5W188 147 aa6.84□□□□□ -1.31
COPS4-210ENST00000511708 RPL39LQ96EH5 51 aaKnown RBP6.84□□□□□ -1.31
COPS4-210ENST00000511708 SMDT1Q9H4I9 107 aa6.84□□□□□ -1.31
COPS4-210ENST00000511708 SDHAF1A6NFY7 115 aa6.83□□□□□ -1.32
COPS4-210ENST00000511708 F8WDY8 70 aa6.83□□□□□ -1.32
COPS4-210ENST00000511708 NUPR1O60356 82 aa6.83□□□□□ -1.32
COPS4-210ENST00000511708 C10orf25Q5T742 122 aa6.83□□□□□ -1.32
COPS4-210ENST00000511708 F2Z2F3 143 aa6.82□□□□□ -1.32
COPS4-210ENST00000511708 KRTAP10-6P60371 365 aaPredicted RBP6.82□□□□□ -1.32
COPS4-210ENST00000511708 KRTAP13-3Q3SY46 172 aa6.82□□□□□ -1.32
COPS4-210ENST00000511708 GAGE2EQ4V326 116 aa6.82□□□□□ -1.32
COPS4-210ENST00000511708 LINC00242Q5T6M2 205 aa6.82□□□□□ -1.32
COPS4-210ENST00000511708 C5orf38Q86SI9 138 aa6.82□□□□□ -1.32
COPS4-210ENST00000511708 OR10D4PQ8NGN7 298 aa6.82□□□□□ -1.32
COPS4-210ENST00000511708 ANAPC11Q9NYG5 84 aa6.82□□□□□ -1.32
COPS4-210ENST00000511708 C6orf48Q9UBA6 75 aa6.82□□□□□ -1.32
COPS4-210ENST00000511708 GAGE2DQ9UEU5 116 aa6.82□□□□□ -1.32
COPS4-210ENST00000511708 SCO2A0A1W2PP80 73 aa6.81□□□□□ -1.32
COPS4-210ENST00000511708 MAP1LC3B2A6NCE7 125 aa6.81□□□□□ -1.32
COPS4-210ENST00000511708 SEC61BP60468 96 aaKnown RBP6.81□□□□□ -1.32
COPS4-210ENST00000511708 RPS20P60866 119 aaKnown RBP6.81□□□□□ -1.32
COPS4-210ENST00000511708 LYZL1Q6UWQ5 148 aa6.81□□□□□ -1.32
COPS4-210ENST00000511708 MAP1LC3BQ9GZQ8 125 aa6.81□□□□□ -1.32
COPS4-210ENST00000511708 I3L3M4 83 aa6.8□□□□□ -1.32
COPS4-210ENST00000511708 NDUFA1O15239 70 aa6.8□□□□□ -1.32
COPS4-210ENST00000511708 PAGE4O60829 102 aa6.8□□□□□ -1.32
COPS4-210ENST00000511708 TMEM241Q24JQ0 296 aa6.8□□□□□ -1.32
COPS4-210ENST00000511708 MRAP2Q96G30 205 aa6.8□□□□□ -1.32
COPS4-210ENST00000511708 CTDSP1Q9GZU7 261 aa6.8□□□□□ -1.32
COPS4-210ENST00000511708 RPL28P46779 137 aaKnown RBP6.79□□□□□ -1.32
COPS4-210ENST00000511708 DEFA1P59665 94 aa6.79□□□□□ -1.32
COPS4-210ENST00000511708 C9orf129Q5T035 196 aaKnown RBP6.79□□□□□ -1.32
COPS4-210ENST00000511708 UNQ6190/PRO20217Q6UXQ8 127 aa6.79□□□□□ -1.32
COPS4-210ENST00000511708 FP248Q71RG6 208 aaPredicted RBP6.79□□□□□ -1.32
COPS4-210ENST00000511708 LINC00337Q8N6G1 96 aa6.79□□□□□ -1.32
COPS4-210ENST00000511708 CNFNQ9BYD5 112 aa6.79□□□□□ -1.32
COPS4-210ENST00000511708 ALG5Q9Y673 324 aa6.79□□□□□ -1.32
COPS4-210ENST00000511708 PMCHP20382 165 aa6.78□□□□□ -1.32
COPS4-210ENST00000511708 CTRLP40313 264 aa6.78□□□□□ -1.32
COPS4-210ENST00000511708 FAM229BQ4G0N7 80 aa6.78□□□□□ -1.32
COPS4-210ENST00000511708 RPL7L1Q6DKI1 246 aaKnown RBP6.78□□□□□ -1.32
COPS4-210ENST00000511708 ORAOV1Q8WV07 137 aa6.78□□□□□ -1.32
COPS4-210ENST00000511708 FAM210AQ96ND0 272 aa6.78□□□□□ -1.32
COPS4-210ENST00000511708 SSPOA2VEC9 5147 aa6.78□□□□□ -1.32
COPS4-210ENST00000511708 TRBV6-5A0A0K0K1A5 114 aa6.77□□□□□ -1.33
COPS4-210ENST00000511708 SSNA1O43805 119 aa6.77□□□□□ -1.33
COPS4-210ENST00000511708 TMUB2Q71RG4 321 aa6.77□□□□□ -1.33
COPS4-210ENST00000511708 C9orf62Q8N4C0 152 aa6.77□□□□□ -1.33
COPS4-210ENST00000511708 ENKURQ8TC29 256 aa6.77□□□□□ -1.33
COPS4-210ENST00000511708 TMEM242Q9NWH2 141 aa6.77□□□□□ -1.33
COPS4-210ENST00000511708 CSDC2Q9Y534 153 aaKnown RBP6.77□□□□□ -1.33
COPS4-210ENST00000511708 TRAV13-1A0A0B4J241 112 aa6.76□□□□□ -1.33
COPS4-210ENST00000511708 AKR1C8PQ5T2L2 129 aa6.76□□□□□ -1.33
COPS4-210ENST00000511708 XKRY2A2RUG3 117 aa6.75□□□□□ -1.33
COPS4-210ENST00000511708 C7orf77A4D0Y5 90 aa6.75□□□□□ -1.33
COPS4-210ENST00000511708 A6NJY4 79 aa6.75□□□□□ -1.33
COPS4-210ENST00000511708 BCE1O60756 84 aa6.75□□□□□ -1.33
COPS4-210ENST00000511708 RPL35P42766 123 aaKnown RBP6.75□□□□□ -1.33
COPS4-210ENST00000511708 TWIST1Q15672 202 aa6.75□□□□□ -1.33
COPS4-210ENST00000511708 RNASE13Q5GAN3 156 aaKnown RBP6.75□□□□□ -1.33
COPS4-210ENST00000511708 TEX261Q6UWH6 196 aa6.75□□□□□ -1.33
COPS4-210ENST00000511708 MARVELD1Q9BSK0 173 aa6.75□□□□□ -1.33
COPS4-210ENST00000511708 RNASE7Q9H1E1 156 aaKnown RBP6.75□□□□□ -1.33
COPS4-210ENST00000511708 IGHV3OR16-9A0A0B4J2B5 98 aa6.74□□□□□ -1.33
COPS4-210ENST00000511708 NDUFC2-KCTD14E9PQ53 114 aa6.74□□□□□ -1.33
COPS4-210ENST00000511708 IFNA1P01562 189 aa6.74□□□□□ -1.33
COPS4-210ENST00000511708 CYTL1Q9NRR1 136 aa6.74□□□□□ -1.33
COPS4-210ENST00000511708 UBE2D4Q9Y2X8 147 aa6.74□□□□□ -1.33
COPS4-210ENST00000511708 C22orf24Q9Y442 160 aa6.74□□□□□ -1.33
COPS4-210ENST00000511708 BORCS7-ASMTA0A0B4J1R7 106 aa6.73□□□□□ -1.33
COPS4-210ENST00000511708 POLR2KP53803 58 aaKnown RBP6.73□□□□□ -1.33
COPS4-210ENST00000511708 FOXA3P55318 350 aaPredicted RBP6.73□□□□□ -1.33
COPS4-210ENST00000511708 KIAA0087Q14695 138 aa6.73□□□□□ -1.33
COPS4-210ENST00000511708 TRBV30A0A0K0K1B3 111 aa6.72□□□□□ -1.33
COPS4-210ENST00000511708 TRBV27A0A0K0K1C4 114 aa6.72□□□□□ -1.33
COPS4-210ENST00000511708 PFDN1O60925 122 aa6.72□□□□□ -1.33
COPS4-210ENST00000511708 KRTAP13-1Q8IUC0 172 aa6.72□□□□□ -1.33
COPS4-210ENST00000511708 USH2AO75445 5202 aa6.72□□□□□ -1.33
COPS4-210ENST00000511708 IGKV2D-26A0A0A0MRZ7 120 aa6.71□□□□□ -1.34
COPS4-210ENST00000511708 LBHQ53QV2 105 aaPredicted RBP6.71□□□□□ -1.34
COPS4-210ENST00000511708 CENPWQ5EE01 88 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms