RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 TMEM203Q969S6 136 aa0.53□□□□□ -2.32
SCAMP1-204ENST00000511551 TEX37Q96LM6 180 aa0.53□□□□□ -2.32
SCAMP1-204ENST00000511551 AP1S3Q96PC3 154 aa0.53□□□□□ -2.32
SCAMP1-204ENST00000511551 S100A13Q99584 98 aa0.53□□□□□ -2.32
SCAMP1-204ENST00000511551 NABP2Q9BQ15 211 aa0.53□□□□□ -2.32
SCAMP1-204ENST00000511551 LXNQ9BS40 222 aa0.53□□□□□ -2.32
SCAMP1-204ENST00000511551 PBDC1Q9BVG4 233 aa0.53□□□□□ -2.32
SCAMP1-204ENST00000511551 SMIM3Q9BZL3 60 aa0.53□□□□□ -2.32
SCAMP1-204ENST00000511551 TCEAL2Q9H3H9 227 aaPredicted RBP0.53□□□□□ -2.32
SCAMP1-204ENST00000511551 CDC42SE1Q9NRR8 79 aa0.53□□□□□ -2.32
SCAMP1-204ENST00000511551 CALML5Q9NZT1 146 aa0.53□□□□□ -2.32
SCAMP1-204ENST00000511551 SCP2D1Q9UJQ7 156 aa0.53□□□□□ -2.32
SCAMP1-204ENST00000511551 PRNDQ9UKY0 176 aa0.53□□□□□ -2.32
SCAMP1-204ENST00000511551 TRAPPC2LQ9UL33 140 aa0.53□□□□□ -2.32
SCAMP1-204ENST00000511551 SSR3Q9UNL2 185 aa0.53□□□□□ -2.32
SCAMP1-204ENST00000511551 U3KQ87 197 aa0.53□□□□□ -2.32
SCAMP1-204ENST00000511551 DNAH8Q96JB1 4490 aa0.53□□□□□ -2.32
SCAMP1-204ENST00000511551 A0A087WSZ3 146 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 TRAV17A0A0B4J275 112 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 PIGBOS1A0A0B4J2F0 54 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 LOC100130705A0A1B0GUX0 176 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 TRBV6-4A0A1B0GX49 114 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 TCRBV3S1A0A5B6 114 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 C20orf202A1L168 122 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 MAP1LC3B2A6NCE7 125 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 NAP1L6A6NFF2 107 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 SNRPGP15A8MWD9 76 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 LINC00587B1AMM8 73 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 J3QR89 54 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 K7ERJ3 54 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 M0R143 59 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 AIPO00170 330 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 GNGT2O14610 69 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 LYRM1O43325 122 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 IFNA1P01562 189 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 IGLV1-51P01701 117 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 APOC3P02656 99 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 CSN2P05814 226 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 CD2P06729 351 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 PIPP12273 146 aaPredicted RBP0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 HIST1H1BP16401 226 aaKnown RBP0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 RPL7P18124 248 aaKnown RBP0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 SPRR2EP22531 72 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 KDELR1P24390 212 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 S100A11P31949 105 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 SDC2P34741 201 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 SPRR2BP35325 72 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 SPRR2AP35326 72 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 FAUP35544 74 aaKnown RBP0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 RBP2P50120 134 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 DYNLT3P51808 116 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 TCTAP57738 103 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 RRAS2P62070 204 aaPredicted RBP0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 LCN6P62502 163 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 PPP3R1P63098 170 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 DCDP81605 110 aaKnown RBP0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 EMX2Q04743 252 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 PEA15Q15121 130 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 MSMO1Q15800 293 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 LTC4SQ16873 150 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 SPRNQ5BIV9 151 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 XAF1Q6GPH4 301 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 HAGHLQ6PII5 290 aaPredicted RBP0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 SCIMPQ6UWF3 145 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 C4orf33Q8N1A6 199 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 TEX29Q8N6K0 151 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 OR8J3Q8NGG0 315 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 TMEM254Q8TBM7 123 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 ZNF431Q8TF32 576 aaPredicted RBP0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 MALSU1Q96EH3 234 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 LYSMD1Q96S90 227 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 GPER1Q99527 375 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 PRRT1Q99946 306 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 SLC25A21Q9BQT8 299 aaPredicted RBP0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 GINS3Q9BRX5 216 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 C2orf88Q9BSF0 95 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 EFCAB11Q9BUY7 163 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 SPANXDQ9BXN6 97 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 SEC11CQ9BY50 192 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 MAP1LC3BQ9GZQ8 125 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 SH3BGRL3Q9H299 93 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 NIT2Q9NQR4 276 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 SMCO4Q9NRQ5 59 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 LYRM2Q9NU23 88 aaPredicted RBP0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 TMEM242Q9NWH2 141 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 COA4Q9NYJ1 87 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 METTL1Q9UBP6 276 aaKnown RBP0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 PCTPQ9UKL6 214 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 HSPB11Q9Y547 144 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 V9GYS6 101 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 TANC2Q9HCD6 1990 aa0.52□□□□□ -2.33
SCAMP1-204ENST00000511551 A0A087WWC5 75 aa0.51□□□□□ -2.33
SCAMP1-204ENST00000511551 LOC107984640A0A0U1RRK4 108 aa0.51□□□□□ -2.33
SCAMP1-204ENST00000511551 LOC285095A0A1B0GVY8 99 aa0.51□□□□□ -2.33
SCAMP1-204ENST00000511551 A0A1B0GW64 132 aa0.51□□□□□ -2.33
SCAMP1-204ENST00000511551 TRDV1A0A1B0GX56 115 aa0.51□□□□□ -2.33
SCAMP1-204ENST00000511551 KANTRA0A1W2PQU2 76 aa0.51□□□□□ -2.33
SCAMP1-204ENST00000511551 A0A1W2PRE2 83 aa0.51□□□□□ -2.33
SCAMP1-204ENST00000511551 TCRBV4S1A1TA0A5B7 111 aa0.51□□□□□ -2.33
SCAMP1-204ENST00000511551 C9orf170A2RU37 121 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms