RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 ATRQ13535 2644 aa3.7□□□□□ -1.82
PTPN13-209ENST00000511467 TRBV10-3A0A0K0K1G6 114 aa3.69□□□□□ -1.82
PTPN13-209ENST00000511467 GAGE6Q13070 117 aa3.69□□□□□ -1.82
PTPN13-209ENST00000511467 NEXN-AS1Q8NBZ9 246 aa3.69□□□□□ -1.82
PTPN13-209ENST00000511467 SPINK2P20155 84 aa3.69□□□□□ -1.82
PTPN13-209ENST00000511467 H3BPC8 53 aa3.69□□□□□ -1.82
PTPN13-209ENST00000511467 PROP1O75360 226 aa3.69□□□□□ -1.82
PTPN13-209ENST00000511467 CD24P25063 80 aa3.69□□□□□ -1.82
PTPN13-209ENST00000511467 RPL28P46779 137 aaKnown RBP3.69□□□□□ -1.82
PTPN13-209ENST00000511467 hDV102S1A0JD36 115 aa3.69□□□□□ -1.82
PTPN13-209ENST00000511467 ZNF503-AS2A6NEH8 195 aa3.69□□□□□ -1.82
PTPN13-209ENST00000511467 M0QY20 66 aa3.69□□□□□ -1.82
PTPN13-209ENST00000511467 PLA2G2AP14555 144 aa3.69□□□□□ -1.82
PTPN13-209ENST00000511467 FOXL2P58012 376 aa3.69□□□□□ -1.82
PTPN13-209ENST00000511467 ATRAIDQ6UW56 229 aa3.69□□□□□ -1.82
PTPN13-209ENST00000511467 NUPR1O60356 82 aa3.69□□□□□ -1.82
PTPN13-209ENST00000511467 IGLL1P15814 213 aa3.69□□□□□ -1.82
PTPN13-209ENST00000511467 ETDBQ3ZM63 59 aa3.69□□□□□ -1.82
PTPN13-209ENST00000511467 TP53AIP1Q9HCN2 124 aa3.69□□□□□ -1.82
PTPN13-209ENST00000511467 IGKV1D-37A0A075B6S9 117 aa3.69□□□□□ -1.82
PTPN13-209ENST00000511467 NTN5Q8WTR8 489 aaPredicted RBP3.69□□□□□ -1.82
PTPN13-209ENST00000511467 CYYR1Q96J86 154 aa3.69□□□□□ -1.82
PTPN13-209ENST00000511467 LIMD2Q9BT23 127 aa3.68□□□□□ -1.82
PTPN13-209ENST00000511467 IGLV1-51P01701 117 aa3.68□□□□□ -1.82
PTPN13-209ENST00000511467 HIGD2AQ9BW72 106 aa3.68□□□□□ -1.82
PTPN13-209ENST00000511467 HECTD1Q9ULT8 2610 aa3.68□□□□□ -1.82
PTPN13-209ENST00000511467 MGAM2Q2M2H8 2515 aa3.68□□□□□ -1.82
PTPN13-209ENST00000511467 TMEM61Q8N0U2 210 aa3.68□□□□□ -1.82
PTPN13-209ENST00000511467 DCANP1Q8TF63 244 aa3.68□□□□□ -1.82
PTPN13-209ENST00000511467 RITA1Q96K30 269 aa3.68□□□□□ -1.82
PTPN13-209ENST00000511467 IGHV3-38A0A0C4DH36 116 aa3.68□□□□□ -1.82
PTPN13-209ENST00000511467 IGHV3-30-3P0DP02 117 aa3.68□□□□□ -1.82
PTPN13-209ENST00000511467 IGHV4-38-2P0DP08 117 aa3.68□□□□□ -1.82
PTPN13-209ENST00000511467 UBE2D2P62837 147 aa3.68□□□□□ -1.82
PTPN13-209ENST00000511467 REG3AQ06141 175 aa3.68□□□□□ -1.82
PTPN13-209ENST00000511467 NRACQ8N912 160 aa3.68□□□□□ -1.82
PTPN13-209ENST00000511467 KNCNA6PVL3 124 aa3.68□□□□□ -1.82
PTPN13-209ENST00000511467 IGHV3-64A0A075B6Q5 118 aa3.67□□□□□ -1.82
PTPN13-209ENST00000511467 CRYGDP07320 174 aa3.67□□□□□ -1.82
PTPN13-209ENST00000511467 PRR30Q53SZ7 412 aaPredicted RBP3.67□□□□□ -1.82
PTPN13-209ENST00000511467 CFAP126Q5VTH2 177 aa3.67□□□□□ -1.82
PTPN13-209ENST00000511467 GTSF1Q8WW33 167 aa3.67□□□□□ -1.82
PTPN13-209ENST00000511467 TMEM223A0PJW6 202 aa3.67□□□□□ -1.82
PTPN13-209ENST00000511467 S4R3C0 116 aa3.67□□□□□ -1.82
PTPN13-209ENST00000511467 SLURP1P55000 103 aa3.66□□□□□ -1.82
PTPN13-209ENST00000511467 UBE2D4Q9Y2X8 147 aa3.66□□□□□ -1.82
PTPN13-209ENST00000511467 DEFB131BA0A096LNP1 70 aa3.66□□□□□ -1.82
PTPN13-209ENST00000511467 ZFP36P26651 326 aaKnown RBP3.66□□□□□ -1.82
PTPN13-209ENST00000511467 POLR2KP53803 58 aaKnown RBP3.66□□□□□ -1.82
PTPN13-209ENST00000511467 PATE2Q6UY27 113 aa3.66□□□□□ -1.82
PTPN13-209ENST00000511467 F8W735 103 aaPredicted RBP3.66□□□□□ -1.82
PTPN13-209ENST00000511467 BPY2O14599 106 aa3.66□□□□□ -1.82
PTPN13-209ENST00000511467 RPL18AQ02543 176 aaKnown RBP3.66□□□□□ -1.82
PTPN13-209ENST00000511467 CXCL6P80162 114 aa3.65□□□□□ -1.82
PTPN13-209ENST00000511467 SYCNQ0VAF6 134 aa3.65□□□□□ -1.82
PTPN13-209ENST00000511467 POM121L12Q8N7R1 296 aa3.65□□□□□ -1.82
PTPN13-209ENST00000511467 ZNF702PQ9H963 129 aa3.65□□□□□ -1.82
PTPN13-209ENST00000511467 IGKV1OR2-108A0A075B7D4 117 aa3.65□□□□□ -1.83
PTPN13-209ENST00000511467 XAGE1AQ9HD64 81 aa3.65□□□□□ -1.83
PTPN13-209ENST00000511467 CHKB-CPT1BH3BT56 60 aa3.65□□□□□ -1.83
PTPN13-209ENST00000511467 BLCAPP62952 87 aa3.65□□□□□ -1.83
PTPN13-209ENST00000511467 TEP1Q99973 2627 aaKnown RBP3.65□□□□□ -1.83
PTPN13-209ENST00000511467 STAB1Q9NY15 2570 aa3.65□□□□□ -1.83
PTPN13-209ENST00000511467 TRAV23DV6A0A075B6W5 121 aa3.64□□□□□ -1.83
PTPN13-209ENST00000511467 IGLV4-3A0A075B6K6 122 aa3.64□□□□□ -1.83
PTPN13-209ENST00000511467 ZNF22P17026 224 aaPredicted RBP3.64□□□□□ -1.83
PTPN13-209ENST00000511467 UBE2D3P61077 147 aa3.64□□□□□ -1.83
PTPN13-209ENST00000511467 FOXI1Q12951 378 aa3.64□□□□□ -1.83
PTPN13-209ENST00000511467 UNC79Q9P2D8 2635 aa3.64□□□□□ -1.83
PTPN13-209ENST00000511467 ANKRD39Q53RE8 183 aa3.64□□□□□ -1.83
PTPN13-209ENST00000511467 C10orf25Q5T742 122 aa3.64□□□□□ -1.83
PTPN13-209ENST00000511467 HAMPP81172 84 aa3.64□□□□□ -1.83
PTPN13-209ENST00000511467 BRK1Q8WUW1 75 aa3.64□□□□□ -1.83
PTPN13-209ENST00000511467 TRAV12-2A0A075B6T6 113 aa3.63□□□□□ -1.83
PTPN13-209ENST00000511467 C17orf77Q96MU5 243 aa3.63□□□□□ -1.83
PTPN13-209ENST00000511467 IGHV3-73A0A0B4J1V6 119 aa3.63□□□□□ -1.83
PTPN13-209ENST00000511467 IGKV3D-20A0A0C4DH25 116 aa3.63□□□□□ -1.83
PTPN13-209ENST00000511467 GNRH2O43555 120 aa3.63□□□□□ -1.83
PTPN13-209ENST00000511467 UBE2D1P51668 147 aa3.63□□□□□ -1.83
PTPN13-209ENST00000511467 Q6ZSV7 163 aa3.63□□□□□ -1.83
PTPN13-209ENST00000511467 CHCHD10Q8WYQ3 142 aaPredicted RBP3.63□□□□□ -1.83
PTPN13-209ENST00000511467 NBEAL1Q6ZS30 2694 aa3.63□□□□□ -1.83
PTPN13-209ENST00000511467 SMKR1H3BMG3 65 aa3.63□□□□□ -1.83
PTPN13-209ENST00000511467 IGLV10-54A0A075B6I4 117 aa3.63□□□□□ -1.83
PTPN13-209ENST00000511467 LST1O00453 97 aa3.63□□□□□ -1.83
PTPN13-209ENST00000511467 LINC00308Q8TCZ7 52 aa3.63□□□□□ -1.83
PTPN13-209ENST00000511467 RNASE8Q8TDE3 154 aaKnown RBP3.63□□□□□ -1.83
PTPN13-209ENST00000511467 FAM30AQ9NZY2 134 aa3.63□□□□□ -1.83
PTPN13-209ENST00000511467 AMELXQ99217 191 aa3.63□□□□□ -1.83
PTPN13-209ENST00000511467 MIR7-3HGQ8N6C7 128 aa3.63□□□□□ -1.83
PTPN13-209ENST00000511467 IGHV3OR16-8A0A075B7F1 116 aa3.62□□□□□ -1.83
PTPN13-209ENST00000511467 A0A1W2PNU3 283 aaPredicted RBP3.62□□□□□ -1.83
PTPN13-209ENST00000511467 ZNF80P51504 273 aaPredicted RBP3.62□□□□□ -1.83
PTPN13-209ENST00000511467 YPEL4Q96NS1 127 aa3.62□□□□□ -1.83
PTPN13-209ENST00000511467 IGLV2-11P01706 119 aa3.62□□□□□ -1.83
PTPN13-209ENST00000511467 MUSTN1Q8IVN3 82 aa3.62□□□□□ -1.83
PTPN13-209ENST00000511467 KPRPQ5T749 579 aaPredicted RBP3.62□□□□□ -1.83
PTPN13-209ENST00000511467 GVQW2A0A096LPI5 108 aaPredicted RBP3.62□□□□□ -1.83
PTPN13-209ENST00000511467 A8MZ25 164 aa3.62□□□□□ -1.83
PTPN13-209ENST00000511467 DKK2Q9UBU2 259 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms