RNA–Protein interactions for RNA: ENST00000511255.1

SMAD1-210, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-210ENST00000511255 MT-ND4LP03901 98 aa5.07□□□□□ -1.6
SMAD1-210ENST00000511255 S100A8P05109 93 aa5.07□□□□□ -1.6
SMAD1-210ENST00000511255 RPS10P46783 165 aaKnown RBP5.07□□□□□ -1.6
SMAD1-210ENST00000511255 KRTAP10-1P60331 282 aa5.07□□□□□ -1.6
SMAD1-210ENST00000511255 SUMO2P61956 95 aaKnown RBP5.07□□□□□ -1.6
SMAD1-210ENST00000511255 HBBP68871 147 aa5.07□□□□□ -1.6
SMAD1-210ENST00000511255 IFITM2Q01629 132 aa5.07□□□□□ -1.6
SMAD1-210ENST00000511255 REG3AQ06141 175 aa5.07□□□□□ -1.6
SMAD1-210ENST00000511255 PNRC1Q12796 327 aaPredicted RBP5.07□□□□□ -1.6
SMAD1-210ENST00000511255 MAPKAPK5-AS1Q8N8E1 139 aa5.07□□□□□ -1.6
SMAD1-210ENST00000511255 C20orf203Q8NBC4 194 aa5.07□□□□□ -1.6
SMAD1-210ENST00000511255 TMEM70Q9BUB7 260 aa5.07□□□□□ -1.6
SMAD1-210ENST00000511255 TMEM242Q9NWH2 141 aa5.07□□□□□ -1.6
SMAD1-210ENST00000511255 DYNC1H1Q14204 4646 aaKnown RBP5.06□□□□□ -1.6
SMAD1-210ENST00000511255 TRBV6-5A0A0K0K1A5 114 aa5.06□□□□□ -1.6
SMAD1-210ENST00000511255 A0A1B0GUV1 79 aa5.06□□□□□ -1.6
SMAD1-210ENST00000511255 A0A1B0GW15 77 aa5.06□□□□□ -1.6
SMAD1-210ENST00000511255 PPP1R17O96001 155 aa5.06□□□□□ -1.6
SMAD1-210ENST00000511255 FCER1GP30273 86 aa5.06□□□□□ -1.6
SMAD1-210ENST00000511255 CKS2P33552 79 aa5.06□□□□□ -1.6
SMAD1-210ENST00000511255 MRPL51Q4U2R6 128 aaKnown RBP5.06□□□□□ -1.6
SMAD1-210ENST00000511255 FAM104BQ5XKR9 115 aa5.06□□□□□ -1.6
SMAD1-210ENST00000511255 TMEM101Q96IK0 257 aa5.06□□□□□ -1.6
SMAD1-210ENST00000511255 BTF3L4Q96K17 158 aa5.06□□□□□ -1.6
SMAD1-210ENST00000511255 PRR34Q9NV39 138 aa5.06□□□□□ -1.6
SMAD1-210ENST00000511255 F8W036 122 aa5.05□□□□□ -1.6
SMAD1-210ENST00000511255 FGF6P10767 208 aa5.05□□□□□ -1.6
SMAD1-210ENST00000511255 POLR2KP53803 58 aaKnown RBP5.05□□□□□ -1.6
SMAD1-210ENST00000511255 C14orf177Q52M58 125 aa5.05□□□□□ -1.6
SMAD1-210ENST00000511255 UQCC3Q6UW78 93 aa5.05□□□□□ -1.6
SMAD1-210ENST00000511255 COMMD7Q86VX2 200 aa5.05□□□□□ -1.6
SMAD1-210ENST00000511255 KIAA1109Q2LD37 5005 aa5.05□□□□□ -1.6
SMAD1-210ENST00000511255 TRAV8-4A0A0B4J246 113 aa5.04□□□□□ -1.6
SMAD1-210ENST00000511255 TRBV27A0A0K0K1C4 114 aa5.04□□□□□ -1.6
SMAD1-210ENST00000511255 A0A1B0GXF2 115 aa5.04□□□□□ -1.6
SMAD1-210ENST00000511255 C7orf77A4D0Y5 90 aa5.04□□□□□ -1.6
SMAD1-210ENST00000511255 LINC00862A6NCI5 91 aa5.04□□□□□ -1.6
SMAD1-210ENST00000511255 D6R8Y8 96 aa5.04□□□□□ -1.6
SMAD1-210ENST00000511255 USP17L23D6RBM5 183 aa5.04□□□□□ -1.6
SMAD1-210ENST00000511255 H7C423 109 aa5.04□□□□□ -1.6
SMAD1-210ENST00000511255 VCYO14598 125 aa5.04□□□□□ -1.6
SMAD1-210ENST00000511255 TSHBP01222 138 aa5.04□□□□□ -1.6
SMAD1-210ENST00000511255 HAMPP81172 84 aa5.04□□□□□ -1.6
SMAD1-210ENST00000511255 ATP5L2Q7Z4Y8 100 aa5.04□□□□□ -1.6
SMAD1-210ENST00000511255 NRACQ8N912 160 aa5.04□□□□□ -1.6
SMAD1-210ENST00000511255 KIR2DL4Q99706 377 aa5.04□□□□□ -1.6
SMAD1-210ENST00000511255 HERC2O95714 4834 aa5.03□□□□□ -1.6
SMAD1-210ENST00000511255 LRP1BQ9NZR2 4599 aa5.03□□□□□ -1.6
SMAD1-210ENST00000511255 TMEM218A2RU14 115 aa5.03□□□□□ -1.6
SMAD1-210ENST00000511255 TNFRSF6BO95407 300 aa5.03□□□□□ -1.6
SMAD1-210ENST00000511255 ZNF25P17030 456 aaPredicted RBP5.03□□□□□ -1.6
SMAD1-210ENST00000511255 ADCYAP1P18509 176 aa5.03□□□□□ -1.6
SMAD1-210ENST00000511255 LINC01620Q4KN68 170 aa5.03□□□□□ -1.6
SMAD1-210ENST00000511255 DGAT2L7PQ6IED9 249 aa5.03□□□□□ -1.6
SMAD1-210ENST00000511255 OR5A1Q8NGJ0 315 aa5.03□□□□□ -1.6
SMAD1-210ENST00000511255 KRTAP29-1A8MX34 341 aaPredicted RBP5.02□□□□□ -1.61
SMAD1-210ENST00000511255 NPYP01303 97 aa5.02□□□□□ -1.61
SMAD1-210ENST00000511255 ESDP10768 282 aa5.02□□□□□ -1.61
SMAD1-210ENST00000511255 XGP55808 180 aa5.02□□□□□ -1.61
SMAD1-210ENST00000511255 SMAGPQ0VAQ4 97 aa5.02□□□□□ -1.61
SMAD1-210ENST00000511255 TMEM136Q6ZRR5 245 aa5.02□□□□□ -1.61
SMAD1-210ENST00000511255 ORMDL3Q8N138 153 aa5.02□□□□□ -1.61
SMAD1-210ENST00000511255 CHCHD10Q8WYQ3 142 aaPredicted RBP5.02□□□□□ -1.61
SMAD1-210ENST00000511255 TMEM18Q96B42 140 aa5.02□□□□□ -1.61
SMAD1-210ENST00000511255 C20orf78Q9BR46 151 aa5.02□□□□□ -1.61
SMAD1-210ENST00000511255 TRBV24-1A0A075B6N3 115 aa5.01□□□□□ -1.61
SMAD1-210ENST00000511255 hDV102S1A0JD36 115 aa5.01□□□□□ -1.61
SMAD1-210ENST00000511255 TCAPO15273 167 aa5.01□□□□□ -1.61
SMAD1-210ENST00000511255 PPBPP02775 128 aa5.01□□□□□ -1.61
SMAD1-210ENST00000511255 SMR3BP02814 79 aaPredicted RBP5.01□□□□□ -1.61
SMAD1-210ENST00000511255 PRSS1P07477 247 aa5.01□□□□□ -1.61
SMAD1-210ENST00000511255 KRTAP26-1Q6PEX3 210 aa5.01□□□□□ -1.61
SMAD1-210ENST00000511255 PRELID3AQ96N28 172 aa5.01□□□□□ -1.61
SMAD1-210ENST00000511255 SMIM2Q9BVW6 85 aa5.01□□□□□ -1.61
SMAD1-210ENST00000511255 SEC11CQ9BY50 192 aa5.01□□□□□ -1.61
SMAD1-210ENST00000511255 DNAH5Q8TE73 4624 aa5.01□□□□□ -1.61
SMAD1-210ENST00000511255 PHOX2AO14813 284 aa5□□□□□ -1.61
SMAD1-210ENST00000511255 RAB5AP20339 215 aa5□□□□□ -1.61
SMAD1-210ENST00000511255 S100PP25815 95 aa5□□□□□ -1.61
SMAD1-210ENST00000511255 XCL1P47992 114 aa5□□□□□ -1.61
SMAD1-210ENST00000511255 RPL32P62910 135 aaKnown RBP5□□□□□ -1.61
SMAD1-210ENST00000511255 SS18Q15532 418 aa5□□□□□ -1.61
SMAD1-210ENST00000511255 RNASE13Q5GAN3 156 aaKnown RBP5□□□□□ -1.61
SMAD1-210ENST00000511255 CFAP161Q6P656 301 aa5□□□□□ -1.61
SMAD1-210ENST00000511255 MRPL52Q86TS9 123 aaKnown RBP5□□□□□ -1.61
SMAD1-210ENST00000511255 CTDSP1Q9GZU7 261 aa5□□□□□ -1.61
SMAD1-210ENST00000511255 LOC389332A0A1B0GUA5 103 aa4.99□□□□□ -1.61
SMAD1-210ENST00000511255 LINC00959A0A1B0GUT2 108 aa4.99□□□□□ -1.61
SMAD1-210ENST00000511255 EPM2AB3EWF7 344 aa4.99□□□□□ -1.61
SMAD1-210ENST00000511255 CCL25O15444 150 aa4.99□□□□□ -1.61
SMAD1-210ENST00000511255 RPL39P62891 51 aaKnown RBP4.99□□□□□ -1.61
SMAD1-210ENST00000511255 HIGD2BQ4VC39 106 aa4.99□□□□□ -1.61
SMAD1-210ENST00000511255 ZNF664Q8N3J9 261 aa4.99□□□□□ -1.61
SMAD1-210ENST00000511255 Q8N9P0 234 aaPredicted RBP4.99□□□□□ -1.61
SMAD1-210ENST00000511255 MAP1LC3AQ9H492 121 aa4.99□□□□□ -1.61
SMAD1-210ENST00000511255 CDC42SE2Q9NRR3 84 aa4.99□□□□□ -1.61
SMAD1-210ENST00000511255 UBE2D4Q9Y2X8 147 aa4.99□□□□□ -1.61
SMAD1-210ENST00000511255 RYR1P21817 5038 aa4.99□□□□□ -1.61
SMAD1-210ENST00000511255 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.98□□□□□ -1.61
SMAD1-210ENST00000511255 TRAV13-1A0A0B4J241 112 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms