RNA–Protein interactions for RNA: ENST00000511129.2

SCARB2-205, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-205ENST00000511129 IGKV1D-33P01593 117 aa3.4□□□□□ -1.87
SCARB2-205ENST00000511129 IGKV1-33P01594 117 aa3.4□□□□□ -1.87
SCARB2-205ENST00000511129 RBP4P02753 201 aa3.4□□□□□ -1.87
SCARB2-205ENST00000511129 C3orf79P0CE67 100 aa3.4□□□□□ -1.87
SCARB2-205ENST00000511129 IGHV1-8P0DP01 117 aa3.4□□□□□ -1.87
SCARB2-205ENST00000511129 NPPCP23582 126 aa3.4□□□□□ -1.87
SCARB2-205ENST00000511129 HINT1P49773 126 aaPredicted RBP3.4□□□□□ -1.87
SCARB2-205ENST00000511129 KRTDAPP60985 99 aa3.4□□□□□ -1.87
SCARB2-205ENST00000511129 RNASE13Q5GAN3 156 aaKnown RBP3.4□□□□□ -1.87
SCARB2-205ENST00000511129 ZNF818PQ6ZRF7 136 aa3.4□□□□□ -1.87
SCARB2-205ENST00000511129 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.4□□□□□ -1.87
SCARB2-205ENST00000511129 WFDC11Q8NEX6 87 aa3.4□□□□□ -1.87
SCARB2-205ENST00000511129 C8orf17Q9NRJ1 99 aa3.4□□□□□ -1.87
SCARB2-205ENST00000511129 TRBV6-6A0A0A6YYG2 114 aa3.39□□□□□ -1.87
SCARB2-205ENST00000511129 A0A0J9YW62 118 aa3.39□□□□□ -1.87
SCARB2-205ENST00000511129 C11orf94C9JXX5 98 aa3.39□□□□□ -1.87
SCARB2-205ENST00000511129 F8W1H4 67 aa3.39□□□□□ -1.87
SCARB2-205ENST00000511129 PLXNB1O43157 2135 aa3.39□□□□□ -1.87
SCARB2-205ENST00000511129 HLA-DQA1P01909 254 aa3.39□□□□□ -1.87
SCARB2-205ENST00000511129 TSPEAR-AS2P59090 65 aa3.39□□□□□ -1.87
SCARB2-205ENST00000511129 C15orf32Q32M92 178 aa3.39□□□□□ -1.87
SCARB2-205ENST00000511129 ASB16-AS1Q495Z4 193 aa3.39□□□□□ -1.87
SCARB2-205ENST00000511129 C10orf128Q5T292 105 aa3.39□□□□□ -1.87
SCARB2-205ENST00000511129 C7orf65Q6ZTY9 151 aa3.39□□□□□ -1.87
SCARB2-205ENST00000511129 C3orf56Q8N813 242 aa3.39□□□□□ -1.87
SCARB2-205ENST00000511129 NPCDR1Q9BY65 106 aa3.39□□□□□ -1.87
SCARB2-205ENST00000511129 ST20Q9HBF5 79 aa3.39□□□□□ -1.87
SCARB2-205ENST00000511129 TRRAPQ9Y4A5 3859 aa3.39□□□□□ -1.87
SCARB2-205ENST00000511129 TENM1Q9UKZ4 2725 aa3.39□□□□□ -1.87
SCARB2-205ENST00000511129 HIVEP2P31629 2446 aa3.39□□□□□ -1.87
SCARB2-205ENST00000511129 WNK2Q9Y3S1 2297 aa3.39□□□□□ -1.87
SCARB2-205ENST00000511129 IGHV3-21A0A0B4J1V1 117 aa3.38□□□□□ -1.87
SCARB2-205ENST00000511129 DEFB108AA8MXU0 73 aa3.38□□□□□ -1.87
SCARB2-205ENST00000511129 OOSP1A8MZH6 123 aa3.38□□□□□ -1.87
SCARB2-205ENST00000511129 LEPROTO15243 131 aa3.38□□□□□ -1.87
SCARB2-205ENST00000511129 MT-ATP8P03928 68 aa3.38□□□□□ -1.87
SCARB2-205ENST00000511129 CBLN1P23435 193 aa3.38□□□□□ -1.87
SCARB2-205ENST00000511129 ASIPP42127 132 aa3.38□□□□□ -1.87
SCARB2-205ENST00000511129 DSCR4P56555 118 aaPredicted RBP3.38□□□□□ -1.87
SCARB2-205ENST00000511129 FXYD7P58549 80 aa3.38□□□□□ -1.87
SCARB2-205ENST00000511129 SNRPD3P62318 126 aaKnown RBP3.38□□□□□ -1.87
SCARB2-205ENST00000511129 BVES-AS1Q5T3Y7 98 aa3.38□□□□□ -1.87
SCARB2-205ENST00000511129 OR8B3Q8NGG8 313 aa3.38□□□□□ -1.87
SCARB2-205ENST00000511129 TSKUQ8WUA8 353 aa3.38□□□□□ -1.87
SCARB2-205ENST00000511129 SPTSSAQ969W0 71 aa3.38□□□□□ -1.87
SCARB2-205ENST00000511129 OR8B2Q96RD0 313 aa3.38□□□□□ -1.87
SCARB2-205ENST00000511129 PMCHL2Q9BQD1 86 aa3.38□□□□□ -1.87
SCARB2-205ENST00000511129 FAM103A1Q9BTL3 118 aaKnown RBP3.38□□□□□ -1.87
SCARB2-205ENST00000511129 OSTCQ9NRP0 149 aa3.38□□□□□ -1.87
SCARB2-205ENST00000511129 EPDR1Q9UM22 224 aa3.38□□□□□ -1.87
SCARB2-205ENST00000511129 ARL2-SNX15V9GYD0 113 aa3.38□□□□□ -1.87
SCARB2-205ENST00000511129 IGHV3-49A0A0A0MS15 119 aa3.37□□□□□ -1.87
SCARB2-205ENST00000511129 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.37□□□□□ -1.87
SCARB2-205ENST00000511129 UBE2L5PA0A1B0GUS4 154 aa3.37□□□□□ -1.87
SCARB2-205ENST00000511129 K7EP34 96 aa3.37□□□□□ -1.87
SCARB2-205ENST00000511129 M0R135 149 aa3.37□□□□□ -1.87
SCARB2-205ENST00000511129 IGKV1-16P04430 117 aa3.37□□□□□ -1.87
SCARB2-205ENST00000511129 ZNF688P0C7X2 276 aa3.37□□□□□ -1.87
SCARB2-205ENST00000511129 IAPPP10997 89 aa3.37□□□□□ -1.87
SCARB2-205ENST00000511129 COX6B1P14854 86 aa3.37□□□□□ -1.87
SCARB2-205ENST00000511129 RPL27AP46776 148 aaKnown RBP3.37□□□□□ -1.87
SCARB2-205ENST00000511129 MRPL51Q4U2R6 128 aaKnown RBP3.37□□□□□ -1.87
SCARB2-205ENST00000511129 SPRNQ5BIV9 151 aa3.37□□□□□ -1.87
SCARB2-205ENST00000511129 SPANXN5Q5MJ07 72 aa3.37□□□□□ -1.87
SCARB2-205ENST00000511129 TMEM136Q6ZRR5 245 aa3.37□□□□□ -1.87
SCARB2-205ENST00000511129 SPATA12Q7Z6I5 190 aa3.37□□□□□ -1.87
SCARB2-205ENST00000511129 GTSF1Q8WW33 167 aa3.37□□□□□ -1.87
SCARB2-205ENST00000511129 RABAC1Q9UI14 185 aa3.37□□□□□ -1.87
SCARB2-205ENST00000511129 V9GYV3 84 aa3.37□□□□□ -1.87
SCARB2-205ENST00000511129 NOTCH3Q9UM47 2321 aa3.37□□□□□ -1.87
SCARB2-205ENST00000511129 FBN1P35555 2871 aaKnown RBP3.37□□□□□ -1.87
SCARB2-205ENST00000511129 IGHV3-15A0A0B4J1V0 119 aa3.36□□□□□ -1.87
SCARB2-205ENST00000511129 MUC21A0A0G2JKD1 596 aa3.36□□□□□ -1.87
SCARB2-205ENST00000511129 SMIM27A0A1W2PRY6 76 aa3.36□□□□□ -1.87
SCARB2-205ENST00000511129 C2orf70A6NJV1 201 aa3.36□□□□□ -1.87
SCARB2-205ENST00000511129 F2Z2F3 143 aa3.36□□□□□ -1.87
SCARB2-205ENST00000511129 H3BRM9 83 aa3.36□□□□□ -1.87
SCARB2-205ENST00000511129 COX7CP15954 63 aa3.36□□□□□ -1.87
SCARB2-205ENST00000511129 UBE2G1P62253 170 aa3.36□□□□□ -1.87
SCARB2-205ENST00000511129 SEC11AP67812 179 aa3.36□□□□□ -1.87
SCARB2-205ENST00000511129 Q1RN00 199 aa3.36□□□□□ -1.87
SCARB2-205ENST00000511129 PIGYQ3MUY2 71 aa3.36□□□□□ -1.87
SCARB2-205ENST00000511129 FAM27BQ5VT28 67 aa3.36□□□□□ -1.87
SCARB2-205ENST00000511129 PATE2Q6UY27 113 aa3.36□□□□□ -1.87
SCARB2-205ENST00000511129 MIR17HGQ75NE6 70 aa3.36□□□□□ -1.87
SCARB2-205ENST00000511129 C15orf56Q8N910 161 aa3.36□□□□□ -1.87
SCARB2-205ENST00000511129 LINC01560Q8TB33 94 aa3.36□□□□□ -1.87
SCARB2-205ENST00000511129 C18orf32Q8TCD1 76 aa3.36□□□□□ -1.87
SCARB2-205ENST00000511129 CELA1Q9UNI1 258 aa3.36□□□□□ -1.87
SCARB2-205ENST00000511129 PRKDCP78527 4128 aaKnown RBP3.35□□□□□ -1.87
SCARB2-205ENST00000511129 DNAH3Q8TD57 4116 aa3.35□□□□□ -1.87
SCARB2-205ENST00000511129 C3orf84H3BNL1 204 aa3.35□□□□□ -1.87
SCARB2-205ENST00000511129 APCSP02743 223 aa3.35□□□□□ -1.87
SCARB2-205ENST00000511129 P0C879 139 aa3.35□□□□□ -1.87
SCARB2-205ENST00000511129 CGB3P0DN86 165 aa3.35□□□□□ -1.87
SCARB2-205ENST00000511129 CGB7P0DN87 165 aa3.35□□□□□ -1.87
SCARB2-205ENST00000511129 CD28P10747 220 aa3.35□□□□□ -1.87
SCARB2-205ENST00000511129 UBE2AP49459 152 aa3.35□□□□□ -1.87
SCARB2-205ENST00000511129 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
SCARB2-205ENST00000511129 CHCHD1Q96BP2 118 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms