RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 TMEM238C9JI98 176 aa11.57□□□□□ -0.56
SQSTM1-213ENST00000510187 INSP01308 110 aa11.57□□□□□ -0.56
SQSTM1-213ENST00000510187 OXLD1Q5BKU9 147 aa11.57□□□□□ -0.56
SQSTM1-213ENST00000510187 C11orf72Q8NBR9 251 aa11.57□□□□□ -0.56
SQSTM1-213ENST00000510187 PRO1854Q9UHT4 67 aa11.57□□□□□ -0.56
SQSTM1-213ENST00000510187 A0A0B4J2C4 111 aa11.57□□□□□ -0.56
SQSTM1-213ENST00000510187 HTN1P15515 57 aa11.57□□□□□ -0.56
SQSTM1-213ENST00000510187 LOC107984156A0A0G2JMH3 177 aa11.56□□□□□ -0.56
SQSTM1-213ENST00000510187 IGHV3-53P01767 116 aa11.56□□□□□ -0.56
SQSTM1-213ENST00000510187 SH2D6Q7Z4S9 175 aa11.56□□□□□ -0.56
SQSTM1-213ENST00000510187 ARL17AQ8IVW1 177 aa11.56□□□□□ -0.56
SQSTM1-213ENST00000510187 FAM104AQ969W3 186 aa11.56□□□□□ -0.56
SQSTM1-213ENST00000510187 FAM110AQ9BQ89 295 aa11.56□□□□□ -0.56
SQSTM1-213ENST00000510187 IGHV3-73A0A0B4J1V6 119 aa11.55□□□□□ -0.56
SQSTM1-213ENST00000510187 RS1O15537 224 aa11.55□□□□□ -0.56
SQSTM1-213ENST00000510187 LINC01587Q99440 93 aa11.55□□□□□ -0.56
SQSTM1-213ENST00000510187 CHCHD7Q9BUK0 85 aa11.55□□□□□ -0.56
SQSTM1-213ENST00000510187 TIMM21Q9BVV7 248 aa11.55□□□□□ -0.56
SQSTM1-213ENST00000510187 C1QTNF4Q9BXJ3 329 aa11.55□□□□□ -0.56
SQSTM1-213ENST00000510187 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.55□□□□□ -0.56
SQSTM1-213ENST00000510187 TINCRA0A1B0GVN0 87 aa11.55□□□□□ -0.56
SQSTM1-213ENST00000510187 PSMB2P49721 201 aa11.55□□□□□ -0.56
SQSTM1-213ENST00000510187 SPATA25Q9BR10 227 aa11.55□□□□□ -0.56
SQSTM1-213ENST00000510187 WFDC10AQ9H1F0 79 aa11.55□□□□□ -0.56
SQSTM1-213ENST00000510187 C19orf73Q9NVV2 129 aa11.55□□□□□ -0.56
SQSTM1-213ENST00000510187 IGHV3-30-3P0DP02 117 aa11.54□□□□□ -0.56
SQSTM1-213ENST00000510187 SCGB1A1P11684 91 aa11.54□□□□□ -0.56
SQSTM1-213ENST00000510187 UBE2D4Q9Y2X8 147 aa11.54□□□□□ -0.56
SQSTM1-213ENST00000510187 A0A0J9YXY3 114 aa11.53□□□□□ -0.56
SQSTM1-213ENST00000510187 STHQ8IWL8 128 aa11.53□□□□□ -0.56
SQSTM1-213ENST00000510187 IGHV1-58A0A0C4DH39 117 aa11.52□□□□□ -0.56
SQSTM1-213ENST00000510187 A4D1N5 150 aa11.52□□□□□ -0.56
SQSTM1-213ENST00000510187 GAGE12HA6NDE8 117 aa11.52□□□□□ -0.56
SQSTM1-213ENST00000510187 SMCPP49901 116 aaPredicted RBP11.52□□□□□ -0.56
SQSTM1-213ENST00000510187 Q6ZSN1 163 aa11.52□□□□□ -0.56
SQSTM1-213ENST00000510187 SBSPONQ8IVN8 264 aa11.52□□□□□ -0.56
SQSTM1-213ENST00000510187 TMEM263Q8WUH6 116 aaKnown RBP11.52□□□□□ -0.56
SQSTM1-213ENST00000510187 SIGMAR1Q99720 223 aa11.52□□□□□ -0.56
SQSTM1-213ENST00000510187 MTURNQ8N3F0 131 aa11.52□□□□□ -0.57
SQSTM1-213ENST00000510187 M0QXV9 152 aa11.51□□□□□ -0.57
SQSTM1-213ENST00000510187 TCL1BO95988 128 aa11.51□□□□□ -0.57
SQSTM1-213ENST00000510187 IGHV3-33P01772 117 aa11.51□□□□□ -0.57
SQSTM1-213ENST00000510187 KRTAP21-3Q3LHN1 58 aa11.51□□□□□ -0.57
SQSTM1-213ENST00000510187 IGHV3-64A0A075B6Q5 118 aa11.5□□□□□ -0.57
SQSTM1-213ENST00000510187 FOXI1Q12951 378 aa11.5□□□□□ -0.57
SQSTM1-213ENST00000510187 MUSTN1Q8IVN3 82 aa11.5□□□□□ -0.57
SQSTM1-213ENST00000510187 IL17DQ8TAD2 202 aa11.5□□□□□ -0.57
SQSTM1-213ENST00000510187 SPANXDQ9BXN6 97 aa11.5□□□□□ -0.57
SQSTM1-213ENST00000510187 SPANXCQ9NY87 97 aa11.5□□□□□ -0.57
SQSTM1-213ENST00000510187 KRTAP10-11P60412 298 aa11.49□□□□□ -0.57
SQSTM1-213ENST00000510187 EGFEM1PQ0D2K5 195 aa11.49□□□□□ -0.57
SQSTM1-213ENST00000510187 VSIG2Q96IQ7 327 aa11.49□□□□□ -0.57
SQSTM1-213ENST00000510187 ERG28Q9UKR5 140 aa11.49□□□□□ -0.57
SQSTM1-213ENST00000510187 NACAE9PAV3 2078 aa11.49□□□□□ -0.57
SQSTM1-213ENST00000510187 PKD1L1Q8TDX9 2849 aa11.49□□□□□ -0.57
SQSTM1-213ENST00000510187 PRM2P04554 102 aa11.49□□□□□ -0.57
SQSTM1-213ENST00000510187 LITAFQ99732 161 aa11.49□□□□□ -0.57
SQSTM1-213ENST00000510187 SCGB1C2P0DMR2 95 aa11.48□□□□□ -0.57
SQSTM1-213ENST00000510187 TIRAPP58753 221 aa11.48□□□□□ -0.57
SQSTM1-213ENST00000510187 CEMP1Q6PRD7 247 aaPredicted RBP11.48□□□□□ -0.57
SQSTM1-213ENST00000510187 SFTA2Q6UW10 78 aa11.48□□□□□ -0.57
SQSTM1-213ENST00000510187 Q6ZUT4 128 aa11.48□□□□□ -0.57
SQSTM1-213ENST00000510187 TEN1Q86WV5 123 aa11.48□□□□□ -0.57
SQSTM1-213ENST00000510187 NDUFA12Q9UI09 145 aa11.48□□□□□ -0.57
SQSTM1-213ENST00000510187 CMYA5Q8N3K9 4069 aa11.48□□□□□ -0.57
SQSTM1-213ENST00000510187 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.47□□□□□ -0.57
SQSTM1-213ENST00000510187 IGLV5-45A0A087WSX0 123 aa11.47□□□□□ -0.57
SQSTM1-213ENST00000510187 IGKV2-29A2NJV5 120 aaPredicted RBP11.47□□□□□ -0.57
SQSTM1-213ENST00000510187 EIF4EBP3O60516 100 aaPredicted RBP11.47□□□□□ -0.57
SQSTM1-213ENST00000510187 TIMM17BO60830 172 aa11.47□□□□□ -0.57
SQSTM1-213ENST00000510187 RPL35AP18077 110 aaKnown RBP11.47□□□□□ -0.57
SQSTM1-213ENST00000510187 PPDPFLQ8WWR9 84 aa11.47□□□□□ -0.57
SQSTM1-213ENST00000510187 RNF183Q96D59 192 aa11.47□□□□□ -0.57
SQSTM1-213ENST00000510187 AZU1P20160 251 aa11.46□□□□□ -0.57
SQSTM1-213ENST00000510187 ZFAND6Q6FIF0 208 aa11.46□□□□□ -0.57
SQSTM1-213ENST00000510187 GEMIN7Q9H840 131 aaKnown RBP11.46□□□□□ -0.57
SQSTM1-213ENST00000510187 Q9UF83 564 aa11.46□□□□□ -0.57
SQSTM1-213ENST00000510187 TRBV10-1A0A0K0K1A3 114 aa11.46□□□□□ -0.58
SQSTM1-213ENST00000510187 TRAV8-3A0A0A6YYJ7 113 aa11.45□□□□□ -0.58
SQSTM1-213ENST00000510187 MIAQ16674 131 aa11.45□□□□□ -0.58
SQSTM1-213ENST00000510187 C1orf158Q8N1D5 194 aa11.45□□□□□ -0.58
SQSTM1-213ENST00000510187 GTSF1LQ9H1H1 148 aa11.45□□□□□ -0.58
SQSTM1-213ENST00000510187 XCL2Q9UBD3 114 aa11.45□□□□□ -0.58
SQSTM1-213ENST00000510187 RNASE13Q5GAN3 156 aaKnown RBP11.44□□□□□ -0.58
SQSTM1-213ENST00000510187 TRBV30A0A0K0K1B3 111 aa11.43□□□□□ -0.58
SQSTM1-213ENST00000510187 FAM19A3Q7Z5A8 133 aa11.43□□□□□ -0.58
SQSTM1-213ENST00000510187 IGHV3-38A0A0C4DH36 116 aa11.43□□□□□ -0.58
SQSTM1-213ENST00000510187 SPINK8P0C7L1 97 aa11.43□□□□□ -0.58
SQSTM1-213ENST00000510187 IFITM1P13164 125 aa11.43□□□□□ -0.58
SQSTM1-213ENST00000510187 SMAGPQ0VAQ4 97 aa11.43□□□□□ -0.58
SQSTM1-213ENST00000510187 LINC01600Q96MT4 127 aa11.43□□□□□ -0.58
SQSTM1-213ENST00000510187 CSDC2Q9Y534 153 aaKnown RBP11.43□□□□□ -0.58
SQSTM1-213ENST00000510187 NDUFA1O15239 70 aa11.42□□□□□ -0.58
SQSTM1-213ENST00000510187 ATXN8Q156A1 80 aa11.42□□□□□ -0.58
SQSTM1-213ENST00000510187 TRAV4A0A0B4J268 109 aa11.41□□□□□ -0.58
SQSTM1-213ENST00000510187 K7EQD1 137 aa11.41□□□□□ -0.58
SQSTM1-213ENST00000510187 IGHV4-30-4P0DP06 118 aa11.41□□□□□ -0.58
SQSTM1-213ENST00000510187 HERVK_113P63121 156 aa11.41□□□□□ -0.58
SQSTM1-213ENST00000510187 RPL36AP83881 106 aaKnown RBP11.41□□□□□ -0.58
SQSTM1-213ENST00000510187 DAZ2Q13117 558 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms