RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 TRBV7-7A0A0K0K1E9 115 aa6.6□□□□□ -1.35
PDGFRA-208ENST00000509490 PRSS2P07478 247 aa6.6□□□□□ -1.35
PDGFRA-208ENST00000509490 NHLRC4P0CG21 123 aaPredicted RBP6.6□□□□□ -1.35
PDGFRA-208ENST00000509490 SPTAN1Q13813 2472 aaKnown RBP6.6□□□□□ -1.35
PDGFRA-208ENST00000509490 TRAV26-1A0A087WT03 109 aa6.6□□□□□ -1.35
PDGFRA-208ENST00000509490 TEX49A0A1B0GTD5 131 aa6.6□□□□□ -1.35
PDGFRA-208ENST00000509490 K7EQD1 137 aa6.6□□□□□ -1.35
PDGFRA-208ENST00000509490 TRACP01848 142 aa6.6□□□□□ -1.35
PDGFRA-208ENST00000509490 COX6A2Q02221 97 aa6.6□□□□□ -1.35
PDGFRA-208ENST00000509490 CDC42SE2Q9NRR3 84 aa6.6□□□□□ -1.35
PDGFRA-208ENST00000509490 SNCGO76070 127 aa6.59□□□□□ -1.35
PDGFRA-208ENST00000509490 GAGE2BQ13066 116 aa6.59□□□□□ -1.35
PDGFRA-208ENST00000509490 GAGE2EQ4V326 116 aa6.59□□□□□ -1.35
PDGFRA-208ENST00000509490 DYNLRB2Q8TF09 96 aa6.59□□□□□ -1.35
PDGFRA-208ENST00000509490 GAGE2DQ9UEU5 116 aa6.59□□□□□ -1.35
PDGFRA-208ENST00000509490 ZFHX3Q15911 3703 aa6.59□□□□□ -1.35
PDGFRA-208ENST00000509490 H7C2G1 150 aa6.59□□□□□ -1.35
PDGFRA-208ENST00000509490 RPL36AP83881 106 aaKnown RBP6.59□□□□□ -1.35
PDGFRA-208ENST00000509490 RPL36ALQ969Q0 106 aaKnown RBP6.59□□□□□ -1.35
PDGFRA-208ENST00000509490 AKAP6Q13023 2319 aa6.59□□□□□ -1.36
PDGFRA-208ENST00000509490 RNASE13Q5GAN3 156 aaKnown RBP6.58□□□□□ -1.36
PDGFRA-208ENST00000509490 NTM-AS1Q6ZSK4 140 aa6.58□□□□□ -1.36
PDGFRA-208ENST00000509490 IMUPQ9GZP8 106 aa6.58□□□□□ -1.36
PDGFRA-208ENST00000509490 A8MZ25 164 aa6.58□□□□□ -1.36
PDGFRA-208ENST00000509490 NDUFV3P56181 108 aaKnown RBP6.58□□□□□ -1.36
PDGFRA-208ENST00000509490 DEFB136Q30KP8 78 aa6.58□□□□□ -1.36
PDGFRA-208ENST00000509490 OVOL2Q9BRP0 275 aa6.57□□□□□ -1.36
PDGFRA-208ENST00000509490 ANAPC13Q9BS18 74 aa6.57□□□□□ -1.36
PDGFRA-208ENST00000509490 Q9H8V8 135 aa6.57□□□□□ -1.36
PDGFRA-208ENST00000509490 CELSR1Q9NYQ6 3014 aa6.57□□□□□ -1.36
PDGFRA-208ENST00000509490 LINC00694P0DN24 101 aa6.57□□□□□ -1.36
PDGFRA-208ENST00000509490 GAGE5Q13069 117 aa6.57□□□□□ -1.36
PDGFRA-208ENST00000509490 GAGE6Q13070 117 aa6.57□□□□□ -1.36
PDGFRA-208ENST00000509490 DGAT2L7PQ6IED9 249 aa6.57□□□□□ -1.36
PDGFRA-208ENST00000509490 SOSTDC1Q6X4U4 206 aa6.57□□□□□ -1.36
PDGFRA-208ENST00000509490 NRGNQ92686 78 aa6.57□□□□□ -1.36
PDGFRA-208ENST00000509490 SVEP1Q4LDE5 3571 aa6.57□□□□□ -1.36
PDGFRA-208ENST00000509490 CRLF1O75462 422 aa6.57□□□□□ -1.36
PDGFRA-208ENST00000509490 DEFB113Q30KQ7 82 aa6.57□□□□□ -1.36
PDGFRA-208ENST00000509490 TRBV6-4A0A1B0GX49 114 aa6.56□□□□□ -1.36
PDGFRA-208ENST00000509490 PRM2P04554 102 aa6.56□□□□□ -1.36
PDGFRA-208ENST00000509490 C15orf53Q8NAA6 179 aa6.56□□□□□ -1.36
PDGFRA-208ENST00000509490 CLEC2BQ92478 149 aa6.56□□□□□ -1.36
PDGFRA-208ENST00000509490 IGHV3-38A0A0C4DH36 116 aa6.56□□□□□ -1.36
PDGFRA-208ENST00000509490 PLAC8L1A1L4L8 177 aa6.56□□□□□ -1.36
PDGFRA-208ENST00000509490 KRTAP1-3Q8IUG1 177 aa6.56□□□□□ -1.36
PDGFRA-208ENST00000509490 HTN1P15515 57 aa6.55□□□□□ -1.36
PDGFRA-208ENST00000509490 RPL28P46779 137 aaKnown RBP6.55□□□□□ -1.36
PDGFRA-208ENST00000509490 STHQ8IWL8 128 aa6.55□□□□□ -1.36
PDGFRA-208ENST00000509490 Q6ZSV7 163 aa6.55□□□□□ -1.36
PDGFRA-208ENST00000509490 GIG44P09565 113 aaPredicted RBP6.54□□□□□ -1.36
PDGFRA-208ENST00000509490 DAND5Q8N907 189 aa6.54□□□□□ -1.36
PDGFRA-208ENST00000509490 C16orf74Q96GX8 76 aa6.54□□□□□ -1.36
PDGFRA-208ENST00000509490 TRAV13-2A0A0B4J235 113 aa6.54□□□□□ -1.36
PDGFRA-208ENST00000509490 TMEM243Q9BU79 118 aa6.54□□□□□ -1.36
PDGFRA-208ENST00000509490 C16orf95Q9H693 158 aa6.54□□□□□ -1.36
PDGFRA-208ENST00000509490 C22orf24Q9Y442 160 aa6.54□□□□□ -1.36
PDGFRA-208ENST00000509490 TRGV1A0A0A0MS02 117 aa6.53□□□□□ -1.36
PDGFRA-208ENST00000509490 LINC01561Q8N1V8 128 aa6.53□□□□□ -1.36
PDGFRA-208ENST00000509490 HIST2H2BCQ6DN03 193 aa6.53□□□□□ -1.36
PDGFRA-208ENST00000509490 HIST2H2BDQ6DRA6 164 aa6.53□□□□□ -1.36
PDGFRA-208ENST00000509490 Q96MF0 132 aa6.53□□□□□ -1.36
PDGFRA-208ENST00000509490 XCL2Q9UBD3 114 aa6.53□□□□□ -1.36
PDGFRA-208ENST00000509490 Q6ZTI0 123 aa6.52□□□□□ -1.37
PDGFRA-208ENST00000509490 PRIMA1Q86XR5 153 aa6.52□□□□□ -1.37
PDGFRA-208ENST00000509490 CSNK1G2-AS1Q8NCQ2 148 aa6.52□□□□□ -1.37
PDGFRA-208ENST00000509490 C19orf73Q9NVV2 129 aa6.52□□□□□ -1.37
PDGFRA-208ENST00000509490 VPS13CQ709C8 3753 aa6.52□□□□□ -1.37
PDGFRA-208ENST00000509490 GAGE12JA6NER3 117 aa6.52□□□□□ -1.37
PDGFRA-208ENST00000509490 GAGE7O76087 117 aa6.52□□□□□ -1.37
PDGFRA-208ENST00000509490 GAGE12FP0CL80 117 aa6.52□□□□□ -1.37
PDGFRA-208ENST00000509490 GAGE12GP0CL81 117 aa6.52□□□□□ -1.37
PDGFRA-208ENST00000509490 GAGE12IP0CL82 117 aa6.52□□□□□ -1.37
PDGFRA-208ENST00000509490 GAGE4Q13068 117 aa6.52□□□□□ -1.37
PDGFRA-208ENST00000509490 TTC32Q5I0X7 151 aa6.52□□□□□ -1.37
PDGFRA-208ENST00000509490 CCL24O00175 119 aa6.51□□□□□ -1.37
PDGFRA-208ENST00000509490 LINC00612Q8N6U2 182 aa6.51□□□□□ -1.37
PDGFRA-208ENST00000509490 OBSCN-AS1Q96MR7 158 aa6.51□□□□□ -1.37
PDGFRA-208ENST00000509490 LINC00643Q86TS7 51 aa6.51□□□□□ -1.37
PDGFRA-208ENST00000509490 MAPK1IP1LQ8NDC0 245 aa6.51□□□□□ -1.37
PDGFRA-208ENST00000509490 IBA57-AS1B1ANH7 110 aa6.51□□□□□ -1.37
PDGFRA-208ENST00000509490 ATP5G1P05496 136 aa6.51□□□□□ -1.37
PDGFRA-208ENST00000509490 CXCL5P42830 114 aa6.51□□□□□ -1.37
PDGFRA-208ENST00000509490 NPC2P61916 151 aa6.51□□□□□ -1.37
PDGFRA-208ENST00000509490 MEIG1Q5JSS6 88 aa6.51□□□□□ -1.37
PDGFRA-208ENST00000509490 COX7B2Q8TF08 81 aa6.51□□□□□ -1.37
PDGFRA-208ENST00000509490 IGHV3OR16-9A0A0B4J2B5 98 aa6.5□□□□□ -1.37
PDGFRA-208ENST00000509490 PKD1L2Q7Z442 2459 aa6.5□□□□□ -1.37
PDGFRA-208ENST00000509490 A0A087WZ39 114 aa6.5□□□□□ -1.37
PDGFRA-208ENST00000509490 IGLV1-51P01701 117 aa6.5□□□□□ -1.37
PDGFRA-208ENST00000509490 INAFM2P0DMQ5 153 aa6.5□□□□□ -1.37
PDGFRA-208ENST00000509490 KHDC1LQ5JSQ8 128 aa6.5□□□□□ -1.37
PDGFRA-208ENST00000509490 CACNA1AO00555 2505 aa6.49□□□□□ -1.37
PDGFRA-208ENST00000509490 DNAJC9-AS1A6NH13 148 aa6.49□□□□□ -1.37
PDGFRA-208ENST00000509490 LY6G6DO95868 133 aa6.49□□□□□ -1.37
PDGFRA-208ENST00000509490 CFAP46Q8IYW2 2715 aa6.49□□□□□ -1.37
PDGFRA-208ENST00000509490 CSPG4Q6UVK1 2322 aa6.49□□□□□ -1.37
PDGFRA-208ENST00000509490 TRAV13-1A0A0B4J241 112 aa6.49□□□□□ -1.37
PDGFRA-208ENST00000509490 H0YGX0 51 aa6.49□□□□□ -1.37
PDGFRA-208ENST00000509490 NDUFA7O95182 113 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms