RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 LOC389332A0A1B0GUA5 103 aa13.32□□□□□ -0.28
HOXC6-204ENST00000509328 MT-ND6P03923 174 aa13.32□□□□□ -0.28
HOXC6-204ENST00000509328 RAB5AP20339 215 aa13.32□□□□□ -0.28
HOXC6-204ENST00000509328 KRTAP26-1Q6PEX3 210 aa13.32□□□□□ -0.28
HOXC6-204ENST00000509328 NTN5Q8WTR8 489 aaPredicted RBP13.32□□□□□ -0.28
HOXC6-204ENST00000509328 FUSP35637 526 aaKnown RBP eCLIP13.31□□□□□ -0.286e-7■■■□□ 18.2
HOXC6-204ENST00000509328 KIAA1644Q3SXP7 199 aa13.31□□□□□ -0.28
HOXC6-204ENST00000509328 DGAT2L7PQ6IED9 249 aa13.31□□□□□ -0.28
HOXC6-204ENST00000509328 CDC42SE2Q9NRR3 84 aa13.31□□□□□ -0.28
HOXC6-204ENST00000509328 UBE2D4Q9Y2X8 147 aa13.31□□□□□ -0.28
HOXC6-204ENST00000509328 CSDC2Q9Y534 153 aaKnown RBP13.31□□□□□ -0.28
HOXC6-204ENST00000509328 TGIF2-C20orf24A0A0A6YYL0 155 aa13.3□□□□□ -0.28
HOXC6-204ENST00000509328 IGKV3OR2-268A0A0C4DH90 116 aa13.3□□□□□ -0.28
HOXC6-204ENST00000509328 ZNF664Q8N3J9 261 aa13.3□□□□□ -0.28
HOXC6-204ENST00000509328 Q8N8P6 123 aa13.3□□□□□ -0.28
HOXC6-204ENST00000509328 TIMM21Q9BVV7 248 aa13.3□□□□□ -0.28
HOXC6-204ENST00000509328 IGLV5-52A0A0A0MRZ9 124 aa13.28□□□□□ -0.28
HOXC6-204ENST00000509328 C14orf177Q52M58 125 aa13.28□□□□□ -0.28
HOXC6-204ENST00000509328 MRPL18Q9H0U6 180 aaKnown RBP13.28□□□□□ -0.28
HOXC6-204ENST00000509328 NXT2Q9NPJ8 142 aaKnown RBP13.28□□□□□ -0.28
HOXC6-204ENST00000509328 DNAH5Q8TE73 4624 aa13.28□□□□□ -0.28
HOXC6-204ENST00000509328 RPL39P62891 51 aaKnown RBP13.27□□□□□ -0.29
HOXC6-204ENST00000509328 USP17L23D6RBM5 183 aa13.26□□□□□ -0.29
HOXC6-204ENST00000509328 K7EMI3 77 aa13.26□□□□□ -0.29
HOXC6-204ENST00000509328 FABP9Q0Z7S8 132 aa13.26□□□□□ -0.29
HOXC6-204ENST00000509328 ALKBH7Q9BT30 221 aaPredicted RBP13.26□□□□□ -0.29
HOXC6-204ENST00000509328 SPANXA1Q9NS26 97 aa13.26□□□□□ -0.29
HOXC6-204ENST00000509328 LINC00959A0A1B0GUT2 108 aa13.25□□□□□ -0.29
HOXC6-204ENST00000509328 CHCHD10Q8WYQ3 142 aaPredicted RBP13.25□□□□□ -0.29
HOXC6-204ENST00000509328 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.24□□□□□ -0.29
HOXC6-204ENST00000509328 GAGE12HA6NDE8 117 aa13.24□□□□□ -0.29
HOXC6-204ENST00000509328 GCSHP23434 173 aa13.24□□□□□ -0.29
HOXC6-204ENST00000509328 IFI27P40305 119 aaPredicted RBP13.24□□□□□ -0.29
HOXC6-204ENST00000509328 ORMDL2Q53FV1 153 aa13.24□□□□□ -0.29
HOXC6-204ENST00000509328 TRAPPC1Q9Y5R8 145 aa13.24□□□□□ -0.29
HOXC6-204ENST00000509328 SS18Q15532 418 aa13.23□□□□□ -0.29
HOXC6-204ENST00000509328 Q6ZUT4 128 aa13.23□□□□□ -0.29
HOXC6-204ENST00000509328 YPEL4Q96NS1 127 aa13.23□□□□□ -0.29
HOXC6-204ENST00000509328 LRP1BQ9NZR2 4599 aa13.22□□□□□ -0.29
HOXC6-204ENST00000509328 SMCO4Q9NRQ5 59 aa13.22□□□□□ -0.29
HOXC6-204ENST00000509328 CCL25O15444 150 aa13.21□□□□□ -0.29
HOXC6-204ENST00000509328 MRPS36P82909 103 aaKnown RBP13.21□□□□□ -0.29
HOXC6-204ENST00000509328 RNASE13Q5GAN3 156 aaKnown RBP13.21□□□□□ -0.29
HOXC6-204ENST00000509328 PRSS3P2Q8NHM4 247 aa13.21□□□□□ -0.29
HOXC6-204ENST00000509328 PYGO1Q9Y3Y4 419 aa13.21□□□□□ -0.29
HOXC6-204ENST00000509328 KIAA1109Q2LD37 5005 aa13.2□□□□□ -0.3
HOXC6-204ENST00000509328 XCL1P47992 114 aa13.2□□□□□ -0.3
HOXC6-204ENST00000509328 C2orf66Q6UXQ4 117 aa13.2□□□□□ -0.3
HOXC6-204ENST00000509328 CBLN2Q8IUK8 224 aa13.2□□□□□ -0.3
HOXC6-204ENST00000509328 FAM104AQ969W3 186 aa13.2□□□□□ -0.3
HOXC6-204ENST00000509328 CYSLTR1Q9Y271 337 aa13.2□□□□□ -0.3
HOXC6-204ENST00000509328 C1orf196B1AJZ1 125 aa13.19□□□□□ -0.3
HOXC6-204ENST00000509328 CDK2AP2O75956 126 aa13.19□□□□□ -0.3
HOXC6-204ENST00000509328 PRSS1P07477 247 aa13.19□□□□□ -0.3
HOXC6-204ENST00000509328 G0S2P27469 103 aa13.19□□□□□ -0.3
HOXC6-204ENST00000509328 KRTAP10-1P60331 282 aa13.19□□□□□ -0.3
HOXC6-204ENST00000509328 FOXI1Q12951 378 aa13.19□□□□□ -0.3
HOXC6-204ENST00000509328 CFAP161Q6P656 301 aa13.18□□□□□ -0.3
HOXC6-204ENST00000509328 OPRPNQ99935 248 aaPredicted RBP13.18□□□□□ -0.3
HOXC6-204ENST00000509328 TRAV13-1A0A0B4J241 112 aa13.17□□□□□ -0.3
HOXC6-204ENST00000509328 CD164L2Q6UWJ8 174 aa13.17□□□□□ -0.3
HOXC6-204ENST00000509328 LINC01546A6NGU7 62 aa13.16□□□□□ -0.3
HOXC6-204ENST00000509328 hDV102S1A0JD36 115 aa13.15□□□□□ -0.3
HOXC6-204ENST00000509328 C15orf56Q8N910 161 aa13.15□□□□□ -0.3
HOXC6-204ENST00000509328 TMEM141Q96I45 108 aa13.15□□□□□ -0.3
HOXC6-204ENST00000509328 RYR1P21817 5038 aa13.14□□□□□ -0.31
HOXC6-204ENST00000509328 IGLV4-3A0A075B6K6 122 aa13.14□□□□□ -0.31
HOXC6-204ENST00000509328 NPSP0C0P6 89 aa13.14□□□□□ -0.31
HOXC6-204ENST00000509328 FA2HQ7L5A8 372 aa13.14□□□□□ -0.31
HOXC6-204ENST00000509328 IFITM10A6NMD0 228 aa13.13□□□□□ -0.31
HOXC6-204ENST00000509328 C18orf32Q8TCD1 76 aa13.13□□□□□ -0.31
HOXC6-204ENST00000509328 TOMM6Q96B49 74 aa13.13□□□□□ -0.31
HOXC6-204ENST00000509328 IGIPA6NJ69 53 aa13.12□□□□□ -0.31
HOXC6-204ENST00000509328 AP5S1Q9NUS5 200 aa13.12□□□□□ -0.31
HOXC6-204ENST00000509328 IGHV1-58A0A0C4DH39 117 aa13.11□□□□□ -0.31
HOXC6-204ENST00000509328 LINC01549A6NIU2 74 aa13.11□□□□□ -0.31
HOXC6-204ENST00000509328 Q6ZN92 141 aa13.11□□□□□ -0.31
HOXC6-204ENST00000509328 TEX43Q6ZNM6 134 aa13.11□□□□□ -0.31
HOXC6-204ENST00000509328 HERC2O95714 4834 aa13.1□□□□□ -0.31
HOXC6-204ENST00000509328 APOBP04114 4563 aaKnown RBP13.1□□□□□ -0.31
HOXC6-204ENST00000509328 GVQW2A0A096LPI5 108 aaPredicted RBP13.1□□□□□ -0.31
HOXC6-204ENST00000509328 COX7A2LO14548 114 aa13.1□□□□□ -0.31
HOXC6-204ENST00000509328 CNBPP62633 177 aaKnown RBP13.1□□□□□ -0.31
HOXC6-204ENST00000509328 LINC01620Q4KN68 170 aa13.1□□□□□ -0.31
HOXC6-204ENST00000509328 TIMM17AQ99595 171 aa13.1□□□□□ -0.31
HOXC6-204ENST00000509328 HIGD2BQ4VC39 106 aa13.09□□□□□ -0.31
HOXC6-204ENST00000509328 PAPPA-AS1Q5QFB9 102 aa13.09□□□□□ -0.31
HOXC6-204ENST00000509328 C9orf163Q8N9P6 203 aa13.09□□□□□ -0.31
HOXC6-204ENST00000509328 AMELXQ99217 191 aa13.09□□□□□ -0.31
HOXC6-204ENST00000509328 C2orf88Q9BSF0 95 aa13.09□□□□□ -0.31
HOXC6-204ENST00000509328 VCX2Q9H322 139 aa13.09□□□□□ -0.31
HOXC6-204ENST00000509328 MALP21145 153 aa13.08□□□□□ -0.32
HOXC6-204ENST00000509328 ERASQ7Z444 233 aa13.08□□□□□ -0.32
HOXC6-204ENST00000509328 SCGB3A1Q96QR1 104 aa13.08□□□□□ -0.32
HOXC6-204ENST00000509328 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.07□□□□□ -0.32
HOXC6-204ENST00000509328 LINC00614P0C842 121 aa13.07□□□□□ -0.32
HOXC6-204ENST00000509328 XGP55808 180 aa13.07□□□□□ -0.32
HOXC6-204ENST00000509328 RAB5BP61020 215 aa13.07□□□□□ -0.32
HOXC6-204ENST00000509328 LINC00173Q6ZV60 143 aa13.07□□□□□ -0.32
HOXC6-204ENST00000509328 SLPIP03973 132 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms