RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 UBE2D4Q9Y2X8 147 aa7.53□□□□□ -1.2
BRCC3P1-201ENST00000508559 IGKV3OR2-268A0A0C4DH90 116 aa7.52□□□□□ -1.21
BRCC3P1-201ENST00000508559 A0A1B0GUV1 79 aa7.52□□□□□ -1.21
BRCC3P1-201ENST00000508559 DNAH10OSP0CZ25 163 aa7.52□□□□□ -1.21
BRCC3P1-201ENST00000508559 LINC00310P59036 64 aa7.52□□□□□ -1.21
BRCC3P1-201ENST00000508559 SNRPEP62304 92 aaKnown RBP7.52□□□□□ -1.21
BRCC3P1-201ENST00000508559 TTC32Q5I0X7 151 aa7.52□□□□□ -1.21
BRCC3P1-201ENST00000508559 ZNF664Q8N3J9 261 aa7.52□□□□□ -1.21
BRCC3P1-201ENST00000508559 C10orf126Q8N4M7 172 aa7.52□□□□□ -1.21
BRCC3P1-201ENST00000508559 LINC00476Q8WZB0 136 aa7.52□□□□□ -1.21
BRCC3P1-201ENST00000508559 VCX2Q9H322 139 aa7.52□□□□□ -1.21
BRCC3P1-201ENST00000508559 KLK12Q9UKR0 248 aa7.52□□□□□ -1.21
BRCC3P1-201ENST00000508559 PYGO1Q9Y3Y4 419 aa7.52□□□□□ -1.21
BRCC3P1-201ENST00000508559 IGLV4-60A0A075B6I1 120 aa7.51□□□□□ -1.21
BRCC3P1-201ENST00000508559 PRSS1P07477 247 aa7.51□□□□□ -1.21
BRCC3P1-201ENST00000508559 CLPSL2Q6UWE3 100 aa7.51□□□□□ -1.21
BRCC3P1-201ENST00000508559 Q6ZUT4 128 aa7.51□□□□□ -1.21
BRCC3P1-201ENST00000508559 Q8N3U1 123 aa7.51□□□□□ -1.21
BRCC3P1-201ENST00000508559 UBE2WQ96B02 151 aa7.51□□□□□ -1.21
BRCC3P1-201ENST00000508559 TIMM17AQ99595 171 aa7.51□□□□□ -1.21
BRCC3P1-201ENST00000508559 C2orf88Q9BSF0 95 aa7.51□□□□□ -1.21
BRCC3P1-201ENST00000508559 CSMD3Q7Z407 3707 aa7.51□□□□□ -1.21
BRCC3P1-201ENST00000508559 IGLV4-3A0A075B6K6 122 aa7.5□□□□□ -1.21
BRCC3P1-201ENST00000508559 H0Y8G0 127 aa7.5□□□□□ -1.21
BRCC3P1-201ENST00000508559 NPSP0C0P6 89 aa7.5□□□□□ -1.21
BRCC3P1-201ENST00000508559 RNASE13Q5GAN3 156 aaKnown RBP7.5□□□□□ -1.21
BRCC3P1-201ENST00000508559 TEX43Q6ZNM6 134 aa7.5□□□□□ -1.21
BRCC3P1-201ENST00000508559 LINC00269Q8N2A0 174 aa7.5□□□□□ -1.21
BRCC3P1-201ENST00000508559 IFI27L1Q96BM0 104 aa7.5□□□□□ -1.21
BRCC3P1-201ENST00000508559 OPRPNQ99935 248 aaPredicted RBP7.5□□□□□ -1.21
BRCC3P1-201ENST00000508559 CSDC2Q9Y534 153 aaKnown RBP7.5□□□□□ -1.21
BRCC3P1-201ENST00000508559 A0A096LNJ9 63 aa7.49□□□□□ -1.21
BRCC3P1-201ENST00000508559 IGIPA6NJ69 53 aa7.49□□□□□ -1.21
BRCC3P1-201ENST00000508559 IFITM10A6NMD0 228 aa7.49□□□□□ -1.21
BRCC3P1-201ENST00000508559 K7EP13 123 aa7.49□□□□□ -1.21
BRCC3P1-201ENST00000508559 M0R2N4 97 aa7.49□□□□□ -1.21
BRCC3P1-201ENST00000508559 MRPS36P82909 103 aaKnown RBP7.49□□□□□ -1.21
BRCC3P1-201ENST00000508559 MAP1LC3CQ9BXW4 147 aa7.49□□□□□ -1.21
BRCC3P1-201ENST00000508559 Q9HAA7 133 aa7.49□□□□□ -1.21
BRCC3P1-201ENST00000508559 CDC42SE2Q9NRR3 84 aa7.49□□□□□ -1.21
BRCC3P1-201ENST00000508559 STARD9Q9P2P6 4700 aa7.49□□□□□ -1.21
BRCC3P1-201ENST00000508559 TRAV13-1A0A0B4J241 112 aa7.48□□□□□ -1.21
BRCC3P1-201ENST00000508559 NBDYA0A0U1RRE5 68 aa7.48□□□□□ -1.21
BRCC3P1-201ENST00000508559 REG3AQ06141 175 aa7.48□□□□□ -1.21
BRCC3P1-201ENST00000508559 SS18Q15532 418 aa7.48□□□□□ -1.21
BRCC3P1-201ENST00000508559 HIST3H2BBQ8N257 126 aa7.48□□□□□ -1.21
BRCC3P1-201ENST00000508559 RMI2Q96E14 147 aa7.48□□□□□ -1.21
BRCC3P1-201ENST00000508559 TRAV8-3A0A0A6YYJ7 113 aa7.47□□□□□ -1.21
BRCC3P1-201ENST00000508559 C5orf52A6NGY3 159 aa7.47□□□□□ -1.21
BRCC3P1-201ENST00000508559 KRTDAPP60985 99 aa7.47□□□□□ -1.21
BRCC3P1-201ENST00000508559 PMVKQ15126 192 aa7.47□□□□□ -1.21
BRCC3P1-201ENST00000508559 LINC00173Q6ZV60 143 aa7.47□□□□□ -1.21
BRCC3P1-201ENST00000508559 BAALCQ8WXS3 180 aa7.47□□□□□ -1.21
BRCC3P1-201ENST00000508559 PACRGQ96M98 296 aaPredicted RBP7.47□□□□□ -1.21
BRCC3P1-201ENST00000508559 PLECQ15149 4684 aaKnown RBP7.47□□□□□ -1.21
BRCC3P1-201ENST00000508559 IGKV2D-24A0A075B6R9 120 aa7.46□□□□□ -1.22
BRCC3P1-201ENST00000508559 IBA57-AS1B1ANH7 110 aa7.46□□□□□ -1.22
BRCC3P1-201ENST00000508559 MIAQ16674 131 aa7.46□□□□□ -1.22
BRCC3P1-201ENST00000508559 ZC2HC1BQ5TFG8 222 aa7.46□□□□□ -1.22
BRCC3P1-201ENST00000508559 C1orf43Q9BWL3 253 aa7.46□□□□□ -1.22
BRCC3P1-201ENST00000508559 IGLV10-54A0A075B6I4 117 aa7.45□□□□□ -1.22
BRCC3P1-201ENST00000508559 PRSS29PA6NIE9 313 aa7.45□□□□□ -1.22
BRCC3P1-201ENST00000508559 HIST1H2BLQ99880 126 aa7.45□□□□□ -1.22
BRCC3P1-201ENST00000508559 TM2D2Q9BX73 214 aa7.45□□□□□ -1.22
BRCC3P1-201ENST00000508559 CST9LQ9H4G1 147 aa7.45□□□□□ -1.22
BRCC3P1-201ENST00000508559 GEMIN7Q9H840 131 aaKnown RBP7.45□□□□□ -1.22
BRCC3P1-201ENST00000508559 ALMS1Q8TCU4 4167 aa7.44□□□□□ -1.22
BRCC3P1-201ENST00000508559 TRAV8-4A0A0B4J246 113 aa7.44□□□□□ -1.22
BRCC3P1-201ENST00000508559 LCE6AA0A183 80 aa7.44□□□□□ -1.22
BRCC3P1-201ENST00000508559 LINC00959A0A1B0GUT2 108 aa7.44□□□□□ -1.22
BRCC3P1-201ENST00000508559 C20orf202A1L168 122 aa7.44□□□□□ -1.22
BRCC3P1-201ENST00000508559 CCL25O15444 150 aa7.44□□□□□ -1.22
BRCC3P1-201ENST00000508559 PSCAO43653 123 aa7.44□□□□□ -1.22
BRCC3P1-201ENST00000508559 SEC11AP67812 179 aa7.44□□□□□ -1.22
BRCC3P1-201ENST00000508559 ENHOQ6UWT2 76 aa7.44□□□□□ -1.22
BRCC3P1-201ENST00000508559 NFE4Q86UQ8 179 aa7.44□□□□□ -1.22
BRCC3P1-201ENST00000508559 AMELXQ99217 191 aa7.44□□□□□ -1.22
BRCC3P1-201ENST00000508559 CHTOPQ9Y3Y2 248 aaKnown RBP7.44□□□□□ -1.22
BRCC3P1-201ENST00000508559 XCL1P47992 114 aa7.43□□□□□ -1.22
BRCC3P1-201ENST00000508559 C4orf48Q5BLP8 95 aa7.43□□□□□ -1.22
BRCC3P1-201ENST00000508559 CHCHD10Q8WYQ3 142 aaPredicted RBP7.43□□□□□ -1.22
BRCC3P1-201ENST00000508559 PRR34Q9NV39 138 aa7.43□□□□□ -1.22
BRCC3P1-201ENST00000508559 COX11Q9Y6N1 276 aa7.43□□□□□ -1.22
BRCC3P1-201ENST00000508559 TRAV12-1A0A0B4J245 112 aa7.42□□□□□ -1.22
BRCC3P1-201ENST00000508559 GAGE12HA6NDE8 117 aa7.42□□□□□ -1.22
BRCC3P1-201ENST00000508559 SYS1-DBNDD2H3BUS1 97 aa7.42□□□□□ -1.22
BRCC3P1-201ENST00000508559 C3orf79P0CE67 100 aa7.42□□□□□ -1.22
BRCC3P1-201ENST00000508559 UBE2D1P51668 147 aa7.42□□□□□ -1.22
BRCC3P1-201ENST00000508559 PET117Q6UWS5 81 aa7.42□□□□□ -1.22
BRCC3P1-201ENST00000508559 OR10D4PQ8NGN7 298 aa7.42□□□□□ -1.22
BRCC3P1-201ENST00000508559 FAM104AQ969W3 186 aa7.42□□□□□ -1.22
BRCC3P1-201ENST00000508559 KRTAP1-5Q9BYS1 174 aa7.42□□□□□ -1.22
BRCC3P1-201ENST00000508559 A0A0J9YXV3 536 aa7.41□□□□□ -1.22
BRCC3P1-201ENST00000508559 MALP21145 153 aa7.41□□□□□ -1.22
BRCC3P1-201ENST00000508559 HERVK_113P63121 156 aa7.41□□□□□ -1.22
BRCC3P1-201ENST00000508559 C1orf134Q5TEV5 83 aa7.41□□□□□ -1.22
BRCC3P1-201ENST00000508559 C6orf223Q8N319 242 aa7.41□□□□□ -1.22
BRCC3P1-201ENST00000508559 LINC00469Q8N7U9 141 aa7.41□□□□□ -1.22
BRCC3P1-201ENST00000508559 TINCRA0A1B0GVN0 87 aa7.4□□□□□ -1.22
BRCC3P1-201ENST00000508559 DPM2O94777 84 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms