RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 NDUFA6P56556 154 aa10.55□□□□□ -0.72
LMNA-222ENST00000508500 KIAA1644Q3SXP7 199 aa10.55□□□□□ -0.72
LMNA-222ENST00000508500 SUMO4Q6EEV6 95 aa10.55□□□□□ -0.72
LMNA-222ENST00000508500 LINC00528Q8N1L1 170 aa10.55□□□□□ -0.72
LMNA-222ENST00000508500 RNF185Q96GF1 192 aa10.55□□□□□ -0.72
LMNA-222ENST00000508500 PKHD1L1Q86WI1 4243 aa10.54□□□□□ -0.72
LMNA-222ENST00000508500 MGPP08493 103 aa10.54□□□□□ -0.72
LMNA-222ENST00000508500 ESDP10768 282 aa10.54□□□□□ -0.72
LMNA-222ENST00000508500 CKS2P33552 79 aa10.54□□□□□ -0.72
LMNA-222ENST00000508500 RBX1P62877 108 aa10.54□□□□□ -0.72
LMNA-222ENST00000508500 GAGE6Q13070 117 aa10.54□□□□□ -0.72
LMNA-222ENST00000508500 C18orf32Q8TCD1 76 aa10.54□□□□□ -0.72
LMNA-222ENST00000508500 C1orf43Q9BWL3 253 aa10.54□□□□□ -0.72
LMNA-222ENST00000508500 PRR34Q9NV39 138 aa10.54□□□□□ -0.72
LMNA-222ENST00000508500 LRP1Q07954 4544 aaKnown RBP10.53□□□□□ -0.72
LMNA-222ENST00000508500 PRSS47A8MTI9 375 aa10.53□□□□□ -0.72
LMNA-222ENST00000508500 KRTAP10-4P60372 401 aaPredicted RBP10.53□□□□□ -0.72
LMNA-222ENST00000508500 PRELID3AQ96N28 172 aa10.53□□□□□ -0.72
LMNA-222ENST00000508500 D6R8Y8 96 aa10.52□□□□□ -0.73
LMNA-222ENST00000508500 CRPP02741 224 aa10.52□□□□□ -0.73
LMNA-222ENST00000508500 SNRPEP62304 92 aaKnown RBP10.52□□□□□ -0.73
LMNA-222ENST00000508500 IQCJQ1A5X6 159 aa10.52□□□□□ -0.73
LMNA-222ENST00000508500 TMEM97Q5BJF2 176 aa10.52□□□□□ -0.73
LMNA-222ENST00000508500 CLPSL2Q6UWE3 100 aa10.52□□□□□ -0.73
LMNA-222ENST00000508500 BAGE3Q86Y29 109 aa10.52□□□□□ -0.73
LMNA-222ENST00000508500 TRBV25-1A0A075B6N4 114 aa10.51□□□□□ -0.73
LMNA-222ENST00000508500 USP17L23D6RBM5 183 aa10.51□□□□□ -0.73
LMNA-222ENST00000508500 MIAQ16674 131 aa10.51□□□□□ -0.73
LMNA-222ENST00000508500 LINC00269Q8N2A0 174 aa10.51□□□□□ -0.73
LMNA-222ENST00000508500 CIRBP-AS1Q8TBR5 109 aa10.51□□□□□ -0.73
LMNA-222ENST00000508500 DEFB104AQ8WTQ1 72 aa10.51□□□□□ -0.73
LMNA-222ENST00000508500 PACRGQ96M98 296 aaPredicted RBP10.51□□□□□ -0.73
LMNA-222ENST00000508500 CHAC1Q9BUX1 264 aa10.51□□□□□ -0.73
LMNA-222ENST00000508500 FAT3Q8TDW7 4589 aa10.51□□□□□ -0.73
LMNA-222ENST00000508500 H7C1H1 209 aa10.5□□□□□ -0.73
LMNA-222ENST00000508500 PRSS1P07477 247 aa10.5□□□□□ -0.73
LMNA-222ENST00000508500 C20orf203Q8NBC4 194 aa10.5□□□□□ -0.73
LMNA-222ENST00000508500 CHCHD1Q96BP2 118 aaKnown RBP10.5□□□□□ -0.73
LMNA-222ENST00000508500 C20orf78Q9BR46 151 aa10.5□□□□□ -0.73
LMNA-222ENST00000508500 IGHV1-24A0A0C4DH33 117 aa10.49□□□□□ -0.73
LMNA-222ENST00000508500 PLA2G1BP04054 148 aaKnown RBP10.49□□□□□ -0.73
LMNA-222ENST00000508500 PMCHP20382 165 aa10.49□□□□□ -0.73
LMNA-222ENST00000508500 PKIAP61925 76 aa10.49□□□□□ -0.73
LMNA-222ENST00000508500 MAP1LC3AQ9H492 121 aa10.49□□□□□ -0.73
LMNA-222ENST00000508500 KRTAP29-1A8MX34 341 aaPredicted RBP10.48□□□□□ -0.73
LMNA-222ENST00000508500 K7EMI3 77 aa10.48□□□□□ -0.73
LMNA-222ENST00000508500 TNFRSF6BO95407 300 aa10.48□□□□□ -0.73
LMNA-222ENST00000508500 RPL32P62910 135 aaKnown RBP10.48□□□□□ -0.73
LMNA-222ENST00000508500 C14orf177Q52M58 125 aa10.48□□□□□ -0.73
LMNA-222ENST00000508500 NXT2Q9NPJ8 142 aaKnown RBP10.48□□□□□ -0.73
LMNA-222ENST00000508500 IGLV4-60A0A075B6I1 120 aa10.47□□□□□ -0.73
LMNA-222ENST00000508500 LOC105371267A0A1B0GV96 52 aa10.47□□□□□ -0.73
LMNA-222ENST00000508500 LINC00614P0C842 121 aa10.47□□□□□ -0.73
LMNA-222ENST00000508500 S100A2P29034 98 aa10.47□□□□□ -0.73
LMNA-222ENST00000508500 HIST3H2BBQ8N257 126 aa10.47□□□□□ -0.73
LMNA-222ENST00000508500 NRACQ8N912 160 aa10.47□□□□□ -0.73
LMNA-222ENST00000508500 TMEM18Q96B42 140 aa10.47□□□□□ -0.73
LMNA-222ENST00000508500 NIT2Q9NQR4 276 aa10.47□□□□□ -0.73
LMNA-222ENST00000508500 IGLV10-54A0A075B6I4 117 aa10.46□□□□□ -0.73
LMNA-222ENST00000508500 TRBV6-5A0A0K0K1A5 114 aa10.46□□□□□ -0.73
LMNA-222ENST00000508500 LINC01546A6NGU7 62 aa10.46□□□□□ -0.73
LMNA-222ENST00000508500 SERF1AO75920 110 aa10.46□□□□□ -0.73
LMNA-222ENST00000508500 NPYP01303 97 aa10.46□□□□□ -0.73
LMNA-222ENST00000508500 REG3AQ06141 175 aa10.46□□□□□ -0.73
LMNA-222ENST00000508500 PRSS3P2Q8NHM4 247 aa10.46□□□□□ -0.73
LMNA-222ENST00000508500 A0A1B0GUV1 79 aa10.45□□□□□ -0.74
LMNA-222ENST00000508500 C9orf163Q8N9P6 203 aa10.45□□□□□ -0.74
LMNA-222ENST00000508500 TRAV26-2A0A0B4J265 109 aa10.44□□□□□ -0.74
LMNA-222ENST00000508500 PANO1I0J062 215 aa10.44□□□□□ -0.74
LMNA-222ENST00000508500 TCAPO15273 167 aa10.44□□□□□ -0.74
LMNA-222ENST00000508500 HSBP1O75506 76 aa10.44□□□□□ -0.74
LMNA-222ENST00000508500 LINC00310P59036 64 aa10.44□□□□□ -0.74
LMNA-222ENST00000508500 FA2HQ7L5A8 372 aa10.44□□□□□ -0.74
LMNA-222ENST00000508500 Q8N8P6 123 aa10.44□□□□□ -0.74
LMNA-222ENST00000508500 TMEM243Q9BU79 118 aa10.44□□□□□ -0.74
LMNA-222ENST00000508500 AP5S1Q9NUS5 200 aa10.44□□□□□ -0.74
LMNA-222ENST00000508500 SMKR1H3BMG3 65 aa10.43□□□□□ -0.74
LMNA-222ENST00000508500 NCR2O95944 276 aa10.43□□□□□ -0.74
LMNA-222ENST00000508500 SUMO2P61956 95 aaKnown RBP10.43□□□□□ -0.74
LMNA-222ENST00000508500 DGAT2L7PQ6IED9 249 aa10.43□□□□□ -0.74
LMNA-222ENST00000508500 ST20Q9HBF5 79 aa10.43□□□□□ -0.74
LMNA-222ENST00000508500 J3QL48 77 aa10.42□□□□□ -0.74
LMNA-222ENST00000508500 G0S2P27469 103 aa10.42□□□□□ -0.74
LMNA-222ENST00000508500 RNASEKQ6P5S7 137 aaKnown RBP10.42□□□□□ -0.74
LMNA-222ENST00000508500 RPL39LQ96EH5 51 aaKnown RBP10.42□□□□□ -0.74
LMNA-222ENST00000508500 SMIM2Q9BVW6 85 aa10.42□□□□□ -0.74
LMNA-222ENST00000508500 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.42□□□□□ -0.74
LMNA-222ENST00000508500 LINC01549A6NIU2 74 aa10.41□□□□□ -0.74
LMNA-222ENST00000508500 SLPIP03973 132 aa10.41□□□□□ -0.74
LMNA-222ENST00000508500 IFI27P40305 119 aaPredicted RBP10.41□□□□□ -0.74
LMNA-222ENST00000508500 POLR2KP53803 58 aaKnown RBP10.41□□□□□ -0.74
LMNA-222ENST00000508500 SDIM1Q6ZPB5 146 aa10.41□□□□□ -0.74
LMNA-222ENST00000508500 URB1-AS1Q96HZ7 61 aa10.41□□□□□ -0.74
LMNA-222ENST00000508500 HIST1H2BLQ99880 126 aa10.41□□□□□ -0.74
LMNA-222ENST00000508500 TRAV8-4A0A0B4J246 113 aa10.4□□□□□ -0.74
LMNA-222ENST00000508500 VCYO14598 125 aa10.4□□□□□ -0.74
LMNA-222ENST00000508500 NUPR1O60356 82 aa10.4□□□□□ -0.74
LMNA-222ENST00000508500 TRBV27A0A0K0K1C4 114 aa10.39□□□□□ -0.75
LMNA-222ENST00000508500 LOC389332A0A1B0GUA5 103 aa10.39□□□□□ -0.75
LMNA-222ENST00000508500 GAS8-AS1O95177 125 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms