RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 UBE2D3P61077 147 aa1.15□□□□□ -2.23
DHFR-204ENST00000508282 UBE2D2P62837 147 aa1.15□□□□□ -2.23
DHFR-204ENST00000508282 Q6ZRX8 168 aa1.15□□□□□ -2.23
DHFR-204ENST00000508282 SMIM4Q8WVI0 70 aa1.15□□□□□ -2.23
DHFR-204ENST00000508282 PMCHL2Q9BQD1 86 aa1.15□□□□□ -2.23
DHFR-204ENST00000508282 KIF21AQ7Z4S6 1674 aa1.15□□□□□ -2.23
DHFR-204ENST00000508282 ZMYM4Q5VZL5 1548 aa1.15□□□□□ -2.23
DHFR-204ENST00000508282 IGLC7A0M8Q6 106 aa1.14□□□□□ -2.23
DHFR-204ENST00000508282 APOC3P02656 99 aa1.14□□□□□ -2.23
DHFR-204ENST00000508282 TRAPPC2P0DI81 140 aa1.14□□□□□ -2.23
DHFR-204ENST00000508282 TRAPPC2BP0DI82 140 aa1.14□□□□□ -2.23
DHFR-204ENST00000508282 GCHFRP30047 84 aa1.14□□□□□ -2.23
DHFR-204ENST00000508282 CFAP126Q5VTH2 177 aa1.14□□□□□ -2.23
DHFR-204ENST00000508282 BAGE2Q86Y30 109 aa1.14□□□□□ -2.23
DHFR-204ENST00000508282 AMELXQ99217 191 aa1.14□□□□□ -2.23
DHFR-204ENST00000508282 VAMP8Q9BV40 100 aa1.14□□□□□ -2.23
DHFR-204ENST00000508282 CDC42SE2Q9NRR3 84 aa1.14□□□□□ -2.23
DHFR-204ENST00000508282 NSD3Q9BZ95 1437 aa1.14□□□□□ -2.23
DHFR-204ENST00000508282 MYO7AQ13402 2215 aa1.13□□□□□ -2.23
DHFR-204ENST00000508282 SSC5DA1L4H1 1573 aa1.13□□□□□ -2.23
DHFR-204ENST00000508282 MAGI1Q96QZ7 1491 aaPredicted RBP1.13□□□□□ -2.23
DHFR-204ENST00000508282 ZNF236Q9UL36 1845 aa1.13□□□□□ -2.23
DHFR-204ENST00000508282 UQCR11O14957 56 aa1.13□□□□□ -2.23
DHFR-204ENST00000508282 Q9H521 79 aa1.13□□□□□ -2.23
DHFR-204ENST00000508282 TROQ12816 1431 aaPredicted RBP1.13□□□□□ -2.23
DHFR-204ENST00000508282 ARHGEF5Q12774 1597 aa1.13□□□□□ -2.23
DHFR-204ENST00000508282 DIP2CQ9Y2E4 1556 aa1.13□□□□□ -2.23
DHFR-204ENST00000508282 SBF2Q86WG5 1849 aa1.12□□□□□ -2.23
DHFR-204ENST00000508282 NAV3Q8IVL0 2385 aa1.12□□□□□ -2.23
DHFR-204ENST00000508282 ANKRD36BQ8N2N9 1353 aa1.12□□□□□ -2.23
DHFR-204ENST00000508282 PRDM15P57071 1507 aaPredicted RBP1.12□□□□□ -2.23
DHFR-204ENST00000508282 EHBP1L1Q8N3D4 1523 aa1.12□□□□□ -2.23
DHFR-204ENST00000508282 ATOX1O00244 68 aa1.12□□□□□ -2.23
DHFR-204ENST00000508282 NDUFC1O43677 76 aa1.12□□□□□ -2.23
DHFR-204ENST00000508282 COX17Q14061 63 aa1.12□□□□□ -2.23
DHFR-204ENST00000508282 NPVFQ9HCQ7 196 aa1.12□□□□□ -2.23
DHFR-204ENST00000508282 BAZ1AQ9NRL2 1556 aaPredicted RBP1.12□□□□□ -2.23
DHFR-204ENST00000508282 SFT2D2O95562 160 aa1.11□□□□□ -2.23
DHFR-204ENST00000508282 GNG2P59768 71 aa1.11□□□□□ -2.23
DHFR-204ENST00000508282 SFTA2Q6UW10 78 aa1.11□□□□□ -2.23
DHFR-204ENST00000508282 NXT2Q9NPJ8 142 aaKnown RBP1.11□□□□□ -2.23
DHFR-204ENST00000508282 FAIMQ9NVQ4 179 aa1.11□□□□□ -2.23
DHFR-204ENST00000508282 LINC01558Q9Y6Z2 57 aa1.11□□□□□ -2.23
DHFR-204ENST00000508282 ARL2-SNX15V9GYD0 113 aa1.1□□□□□ -2.23
DHFR-204ENST00000508282 ADGRL2O95490 1459 aa1.1□□□□□ -2.23
DHFR-204ENST00000508282 LRRC37A2A6NM11 1700 aa1.09□□□□□ -2.23
DHFR-204ENST00000508282 A0A0D9SG42 100 aa1.09□□□□□ -2.23
DHFR-204ENST00000508282 FAM223AQ8IWN6 122 aa1.09□□□□□ -2.23
DHFR-204ENST00000508282 PROK2Q9HC23 129 aa1.09□□□□□ -2.23
DHFR-204ENST00000508282 V9GYS6 101 aa1.09□□□□□ -2.23
DHFR-204ENST00000508282 BTAF1O14981 1849 aa1.09□□□□□ -2.23
DHFR-204ENST00000508282 SCN7AQ01118 1682 aa1.09□□□□□ -2.24
DHFR-204ENST00000508282 HMGXB3Q12766 1538 aa1.09□□□□□ -2.24
DHFR-204ENST00000508282 PDCD11Q14690 1871 aaKnown RBP1.08□□□□□ -2.24
DHFR-204ENST00000508282 PLEKHH2Q8IVE3 1493 aa1.08□□□□□ -2.24
DHFR-204ENST00000508282 MLH3Q9UHC1 1453 aa1.08□□□□□ -2.24
DHFR-204ENST00000508282 G3V318 75 aa1.08□□□□□ -2.24
DHFR-204ENST00000508282 PIN1P1O15428 100 aa1.08□□□□□ -2.24
DHFR-204ENST00000508282 MGPP08493 103 aa1.08□□□□□ -2.24
DHFR-204ENST00000508282 CADP27708 2225 aa1.08□□□□□ -2.24
DHFR-204ENST00000508282 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
DHFR-204ENST00000508282 RB1CC1Q8TDY2 1594 aa1.08□□□□□ -2.24
DHFR-204ENST00000508282 WNK3Q9BYP7 1800 aa1.08□□□□□ -2.24
DHFR-204ENST00000508282 JMJD1CQ15652 2540 aa1.08□□□□□ -2.24
DHFR-204ENST00000508282 RAPGEF2Q9Y4G8 1499 aa1.07□□□□□ -2.24
DHFR-204ENST00000508282 MARF1Q9Y4F3 1742 aaKnown RBP1.07□□□□□ -2.24
DHFR-204ENST00000508282 A0A0G2JND7 137 aa1.07□□□□□ -2.24
DHFR-204ENST00000508282 IGLC1P0CG04 106 aa1.07□□□□□ -2.24
DHFR-204ENST00000508282 SAA2P0DJI9 122 aaPredicted RBP1.07□□□□□ -2.24
DHFR-204ENST00000508282 ASIPP42127 132 aa1.07□□□□□ -2.24
DHFR-204ENST00000508282 SERP2Q8N6R1 65 aa1.07□□□□□ -2.24
DHFR-204ENST00000508282 TRGV9Q99603 122 aa1.07□□□□□ -2.24
DHFR-204ENST00000508282 C10orf95Q9H7T3 257 aa1.07□□□□□ -2.24
DHFR-204ENST00000508282 CACFD1Q9UGQ2 172 aa1.07□□□□□ -2.24
DHFR-204ENST00000508282 ASH1LQ9NR48 2969 aaKnown RBP1.07□□□□□ -2.24
DHFR-204ENST00000508282 RAPGEF6Q8TEU7 1601 aa1.07□□□□□ -2.24
DHFR-204ENST00000508282 KIAA1551Q9HCM1 1747 aa1.06□□□□□ -2.24
DHFR-204ENST00000508282 MYO7BQ6PIF6 2116 aa1.06□□□□□ -2.24
DHFR-204ENST00000508282 GPR98Q8WXG9 6306 aa1.06□□□□□ -2.24
DHFR-204ENST00000508282 FAUP35544 74 aaKnown RBP1.06□□□□□ -2.24
DHFR-204ENST00000508282 UBE2DNLQ8IWF7 75 aa1.06□□□□□ -2.24
DHFR-204ENST00000508282 CLTCQ00610 1675 aaKnown RBP1.06□□□□□ -2.24
DHFR-204ENST00000508282 COL4A6Q14031 1691 aa1.06□□□□□ -2.24
DHFR-204ENST00000508282 ARHGEF12Q9NZN5 1544 aa1.05□□□□□ -2.24
DHFR-204ENST00000508282 TRBV7-7A0A0K0K1E9 115 aa1.05□□□□□ -2.24
DHFR-204ENST00000508282 FAM223BA6NKX1 122 aa1.05□□□□□ -2.24
DHFR-204ENST00000508282 NMBP08949 121 aa1.05□□□□□ -2.24
DHFR-204ENST00000508282 KDM3BQ7LBC6 1761 aa1.05□□□□□ -2.24
DHFR-204ENST00000508282 NUP188Q5SRE5 1749 aa1.04□□□□□ -2.24
DHFR-204ENST00000508282 PLXNB2O15031 1838 aa1.04□□□□□ -2.24
DHFR-204ENST00000508282 ZNF462Q96JM2 2506 aa1.04□□□□□ -2.24
DHFR-204ENST00000508282 UQCRHLA0A096LP55 91 aa1.04□□□□□ -2.24
DHFR-204ENST00000508282 A0A1B0GWA3 101 aa1.04□□□□□ -2.24
DHFR-204ENST00000508282 M0R3E3 92 aa1.04□□□□□ -2.24
DHFR-204ENST00000508282 GYPAP02724 150 aa1.04□□□□□ -2.24
DHFR-204ENST00000508282 UQCRHP07919 91 aa1.04□□□□□ -2.24
DHFR-204ENST00000508282 HAMPP81172 84 aa1.04□□□□□ -2.24
DHFR-204ENST00000508282 PMCHL1Q16048 86 aa1.04□□□□□ -2.24
DHFR-204ENST00000508282 MON2Q7Z3U7 1717 aa1.03□□□□□ -2.24
DHFR-204ENST00000508282 RGPD4Q7Z3J3 1758 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms