RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 C3orf79P0CE67 100 aa1.19□□□□□ -2.22
USP53-204ENST00000507906 MPC1LP0DKB6 136 aa1.19□□□□□ -2.22
USP53-204ENST00000507906 COX7CP15954 63 aa1.19□□□□□ -2.22
USP53-204ENST00000507906 RPS28P62857 69 aaKnown RBP1.19□□□□□ -2.22
USP53-204ENST00000507906 Q0VG73 95 aa1.19□□□□□ -2.22
USP53-204ENST00000507906 CYP2G1PQ6ZSU1 146 aa1.19□□□□□ -2.22
USP53-204ENST00000507906 OR8I2Q8N0Y5 310 aa1.19□□□□□ -2.22
USP53-204ENST00000507906 TCTEX1D1Q8N7M0 179 aa1.19□□□□□ -2.22
USP53-204ENST00000507906 OR5A2Q8NGI9 324 aa1.19□□□□□ -2.22
USP53-204ENST00000507906 OR10AC1Q8NH08 325 aa1.19□□□□□ -2.22
USP53-204ENST00000507906 SDF2Q99470 211 aa1.19□□□□□ -2.22
USP53-204ENST00000507906 LIMD2Q9BT23 127 aa1.19□□□□□ -2.22
USP53-204ENST00000507906 PSMG3Q9BT73 122 aaPredicted RBP1.19□□□□□ -2.22
USP53-204ENST00000507906 SMIM3Q9BZL3 60 aa1.19□□□□□ -2.22
USP53-204ENST00000507906 ERG28Q9UKR5 140 aa1.19□□□□□ -2.22
USP53-204ENST00000507906 BOKQ9UMX3 212 aaPredicted RBP1.19□□□□□ -2.22
USP53-204ENST00000507906 UNC13CQ8NB66 2214 aa1.19□□□□□ -2.22
USP53-204ENST00000507906 H3BRM9 83 aa1.18□□□□□ -2.22
USP53-204ENST00000507906 K7EP34 96 aa1.18□□□□□ -2.22
USP53-204ENST00000507906 HMGN4O00479 90 aa1.18□□□□□ -2.22
USP53-204ENST00000507906 CDC42EP2O14613 210 aa1.18□□□□□ -2.22
USP53-204ENST00000507906 CYB5AP00167 134 aa1.18□□□□□ -2.22
USP53-204ENST00000507906 GYPAP02724 150 aa1.18□□□□□ -2.22
USP53-204ENST00000507906 PRH1P02810 166 aa1.18□□□□□ -2.22
USP53-204ENST00000507906 PIRTP0C851 137 aa1.18□□□□□ -2.22
USP53-204ENST00000507906 CMPK1P30085 196 aa1.18□□□□□ -2.22
USP53-204ENST00000507906 GNG4P50150 75 aa1.18□□□□□ -2.22
USP53-204ENST00000507906 MRPS36P82909 103 aaKnown RBP1.18□□□□□ -2.22
USP53-204ENST00000507906 QRFPP83859 136 aa1.18□□□□□ -2.22
USP53-204ENST00000507906 HIST1H1AQ02539 215 aaPredicted RBP1.18□□□□□ -2.22
USP53-204ENST00000507906 CIRBPQ14011 172 aaKnown RBP1.18□□□□□ -2.22
USP53-204ENST00000507906 DIAPH2-AS1Q14236 149 aa1.18□□□□□ -2.22
USP53-204ENST00000507906 GLYATL3Q5SZD4 288 aa1.18□□□□□ -2.22
USP53-204ENST00000507906 MRPL54Q6P161 138 aaKnown RBP1.18□□□□□ -2.22
USP53-204ENST00000507906 LINC00322Q6ZN03 302 aaPredicted RBP1.18□□□□□ -2.22
USP53-204ENST00000507906 SMIM5Q71RC9 77 aa1.18□□□□□ -2.22
USP53-204ENST00000507906 C18orf32Q8TCD1 76 aa1.18□□□□□ -2.22
USP53-204ENST00000507906 NABP2Q9BQ15 211 aa1.18□□□□□ -2.22
USP53-204ENST00000507906 TTTY10Q9BZA0 68 aa1.18□□□□□ -2.22
USP53-204ENST00000507906 LINC00312Q9Y6C7 94 aa1.18□□□□□ -2.22
USP53-204ENST00000507906 COL4A6Q14031 1691 aa1.18□□□□□ -2.22
USP53-204ENST00000507906 COL6A6A6NMZ7 2263 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 POLEQ07864 2286 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 A0A1B0GX51 115 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 ARL5CA6NH57 179 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 CRYM-AS1A6NIL9 109 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 CPSF4LA6NMK7 179 aaKnown RBP1.17□□□□□ -2.22
USP53-204ENST00000507906 DEGS1O15121 323 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 PPYP01298 95 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 TNFP01375 233 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 GYPBP06028 91 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 SLC25A6P12236 298 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 GUCA1AP43080 201 aaPredicted RBP1.17□□□□□ -2.22
USP53-204ENST00000507906 KRTDAPP60985 99 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 SEC11AP67812 179 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 ADIRFQ15847 76 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 PMCHL1Q16048 86 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 LINC01590Q5TEZ4 76 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 GTF2H5Q6ZYL4 71 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 TEN1Q86WV5 123 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 ATOH7Q8N100 152 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 OR51A4Q8NGJ6 313 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 VSTM2AQ8TAG5 236 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 TSKUQ8WUA8 353 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 AMELYQ99218 206 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 SMIM7Q9BQ49 75 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 BANF2Q9H503 90 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 ST20Q9HBF5 79 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 GNG13Q9P2W3 67 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 HSPB8Q9UJY1 196 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 IER3IP1Q9Y5U9 82 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 OTOGLQ3ZCN5 2332 aa1.17□□□□□ -2.22
USP53-204ENST00000507906 A0A1W2PPM0 123 aa1.16□□□□□ -2.22
USP53-204ENST00000507906 FAM24AA6NFZ4 105 aa1.16□□□□□ -2.22
USP53-204ENST00000507906 CEBPZOSA8MTT3 80 aa1.16□□□□□ -2.22
USP53-204ENST00000507906 TMEM14DPA8MWL7 114 aa1.16□□□□□ -2.22
USP53-204ENST00000507906 CCDC179H3BU77 68 aa1.16□□□□□ -2.22
USP53-204ENST00000507906 H3BUT2 72 aa1.16□□□□□ -2.22
USP53-204ENST00000507906 MT-ATP8P03928 68 aa1.16□□□□□ -2.22
USP53-204ENST00000507906 COX8AP10176 69 aa1.16□□□□□ -2.22
USP53-204ENST00000507906 CBLN1P23435 193 aa1.16□□□□□ -2.22
USP53-204ENST00000507906 UBE2G1P62253 170 aa1.16□□□□□ -2.22
USP53-204ENST00000507906 WFDC2Q14508 124 aa1.16□□□□□ -2.22
USP53-204ENST00000507906 GLIPR1L1Q6UWM5 242 aa1.16□□□□□ -2.22
USP53-204ENST00000507906 Q6ZUT4 128 aa1.16□□□□□ -2.22
USP53-204ENST00000507906 BAGE3Q86Y29 109 aa1.16□□□□□ -2.22
USP53-204ENST00000507906 BAGE2Q86Y30 109 aa1.16□□□□□ -2.22
USP53-204ENST00000507906 TTC9CQ8N5M4 171 aa1.16□□□□□ -2.22
USP53-204ENST00000507906 TSTD1Q8NFU3 115 aa1.16□□□□□ -2.22
USP53-204ENST00000507906 ATP6V0E2Q8NHE4 81 aa1.16□□□□□ -2.22
USP53-204ENST00000507906 PP6455Q8WZ26 134 aa1.16□□□□□ -2.22
USP53-204ENST00000507906 LSM10Q969L4 123 aaKnown RBP1.16□□□□□ -2.22
USP53-204ENST00000507906 PMCHL2Q9BQD1 86 aa1.16□□□□□ -2.22
USP53-204ENST00000507906 C20orf78Q9BR46 151 aa1.16□□□□□ -2.22
USP53-204ENST00000507906 FAM103A1Q9BTL3 118 aaKnown RBP1.16□□□□□ -2.22
USP53-204ENST00000507906 RPRMQ9NS64 109 aa1.16□□□□□ -2.22
USP53-204ENST00000507906 ZGRF1Q86YA3 2104 aa1.16□□□□□ -2.22
USP53-204ENST00000507906 PRRC2BQ5JSZ5 2229 aaKnown RBP1.16□□□□□ -2.22
USP53-204ENST00000507906 TNCP24821 2201 aa1.15□□□□□ -2.23
USP53-204ENST00000507906 C3orf85A0A1B0GTC6 90 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms