RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 IGLV4-3A0A075B6K6 122 aa9.59□□□□□ -0.87
RNF4-208ENST00000507247 RNASE13Q5GAN3 156 aaKnown RBP9.59□□□□□ -0.87
RNF4-208ENST00000507247 LINC00173Q6ZV60 143 aa9.59□□□□□ -0.87
RNF4-208ENST00000507247 OR5A1Q8NGJ0 315 aa9.59□□□□□ -0.87
RNF4-208ENST00000507247 SCGB3A1Q96QR1 104 aa9.59□□□□□ -0.87
RNF4-208ENST00000507247 KLK12Q9UKR0 248 aa9.59□□□□□ -0.87
RNF4-208ENST00000507247 HYDINQ4G0P3 5121 aa9.59□□□□□ -0.87
RNF4-208ENST00000507247 LCE6AA0A183 80 aa9.58□□□□□ -0.88
RNF4-208ENST00000507247 LINC01549A6NIU2 74 aa9.58□□□□□ -0.88
RNF4-208ENST00000507247 ANGP03950 147 aaKnown RBP9.58□□□□□ -0.88
RNF4-208ENST00000507247 S100A6P06703 90 aa9.58□□□□□ -0.88
RNF4-208ENST00000507247 SMAGPQ0VAQ4 97 aa9.58□□□□□ -0.88
RNF4-208ENST00000507247 DGAT2L7PQ6IED9 249 aa9.58□□□□□ -0.88
RNF4-208ENST00000507247 ERASQ7Z444 233 aa9.58□□□□□ -0.88
RNF4-208ENST00000507247 TMEM101Q96IK0 257 aa9.58□□□□□ -0.88
RNF4-208ENST00000507247 TIMM17AQ99595 171 aa9.58□□□□□ -0.88
RNF4-208ENST00000507247 CDC42SE2Q9NRR3 84 aa9.58□□□□□ -0.88
RNF4-208ENST00000507247 MRPS36P82909 103 aaKnown RBP9.57□□□□□ -0.88
RNF4-208ENST00000507247 ZC2HC1BQ5TFG8 222 aa9.57□□□□□ -0.88
RNF4-208ENST00000507247 CLPSL2Q6UWE3 100 aa9.57□□□□□ -0.88
RNF4-208ENST00000507247 ZNF664Q8N3J9 261 aa9.57□□□□□ -0.88
RNF4-208ENST00000507247 NBDYA0A0U1RRE5 68 aa9.56□□□□□ -0.88
RNF4-208ENST00000507247 C5orf52A6NGY3 159 aa9.56□□□□□ -0.88
RNF4-208ENST00000507247 SNRPEP62304 92 aaKnown RBP9.56□□□□□ -0.88
RNF4-208ENST00000507247 HIST3H2BBQ8N257 126 aa9.56□□□□□ -0.88
RNF4-208ENST00000507247 LINC00269Q8N2A0 174 aa9.56□□□□□ -0.88
RNF4-208ENST00000507247 TMEM141Q96I45 108 aa9.56□□□□□ -0.88
RNF4-208ENST00000507247 VPS13DQ5THJ4 4388 aa9.55□□□□□ -0.88
RNF4-208ENST00000507247 IBA57-AS1B1ANH7 110 aa9.55□□□□□ -0.88
RNF4-208ENST00000507247 LEPROTL1O95214 131 aa9.55□□□□□ -0.88
RNF4-208ENST00000507247 NPSP0C0P6 89 aa9.55□□□□□ -0.88
RNF4-208ENST00000507247 FABP4P15090 132 aa9.55□□□□□ -0.88
RNF4-208ENST00000507247 ENHOQ6UWT2 76 aa9.55□□□□□ -0.88
RNF4-208ENST00000507247 PRR34Q9NV39 138 aa9.55□□□□□ -0.88
RNF4-208ENST00000507247 EPPK1P58107 5090 aaKnown RBP9.54□□□□□ -0.88
RNF4-208ENST00000507247 IGKV3OR2-268A0A0C4DH90 116 aa9.54□□□□□ -0.88
RNF4-208ENST00000507247 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.54□□□□□ -0.88
RNF4-208ENST00000507247 M0R2N4 97 aa9.54□□□□□ -0.88
RNF4-208ENST00000507247 ATP5LO75964 103 aa9.54□□□□□ -0.88
RNF4-208ENST00000507247 REG3AQ06141 175 aa9.54□□□□□ -0.88
RNF4-208ENST00000507247 C10orf126Q8N4M7 172 aa9.54□□□□□ -0.88
RNF4-208ENST00000507247 BAALCQ8WXS3 180 aa9.54□□□□□ -0.88
RNF4-208ENST00000507247 IFI27L1Q96BM0 104 aa9.54□□□□□ -0.88
RNF4-208ENST00000507247 AMELXQ99217 191 aa9.54□□□□□ -0.88
RNF4-208ENST00000507247 TRAV9-2A0A087WT02 112 aa9.53□□□□□ -0.88
RNF4-208ENST00000507247 IFITM10A6NMD0 228 aa9.53□□□□□ -0.88
RNF4-208ENST00000507247 K7EP13 123 aa9.53□□□□□ -0.88
RNF4-208ENST00000507247 TTC32Q5I0X7 151 aa9.53□□□□□ -0.88
RNF4-208ENST00000507247 Q6ZR54 194 aa9.53□□□□□ -0.88
RNF4-208ENST00000507247 UBE2WQ96B02 151 aa9.53□□□□□ -0.88
RNF4-208ENST00000507247 CRPP02741 224 aa9.52□□□□□ -0.89
RNF4-208ENST00000507247 Q6ZN92 141 aa9.52□□□□□ -0.89
RNF4-208ENST00000507247 TEX43Q6ZNM6 134 aa9.52□□□□□ -0.89
RNF4-208ENST00000507247 PACRGQ96M98 296 aaPredicted RBP9.52□□□□□ -0.89
RNF4-208ENST00000507247 HSPB8Q9UJY1 196 aa9.52□□□□□ -0.89
RNF4-208ENST00000507247 LINC00959A0A1B0GUT2 108 aa9.51□□□□□ -0.89
RNF4-208ENST00000507247 PAPPA-AS1Q5QFB9 102 aa9.51□□□□□ -0.89
RNF4-208ENST00000507247 HIST1H2BLQ99880 126 aa9.51□□□□□ -0.89
RNF4-208ENST00000507247 VCX2Q9H322 139 aa9.51□□□□□ -0.89
RNF4-208ENST00000507247 Q9HAA7 133 aa9.51□□□□□ -0.89
RNF4-208ENST00000507247 IGLV10-54A0A075B6I4 117 aa9.5□□□□□ -0.89
RNF4-208ENST00000507247 TRAV13-1A0A0B4J241 112 aa9.5□□□□□ -0.89
RNF4-208ENST00000507247 S100A2P29034 98 aa9.5□□□□□ -0.89
RNF4-208ENST00000507247 PMVKQ15126 192 aa9.5□□□□□ -0.89
RNF4-208ENST00000507247 CST9LQ9H4G1 147 aa9.5□□□□□ -0.89
RNF4-208ENST00000507247 DNAH6Q9C0G6 4158 aa9.49□□□□□ -0.89
RNF4-208ENST00000507247 PRSS29PA6NIE9 313 aa9.49□□□□□ -0.89
RNF4-208ENST00000507247 UBE2D1P51668 147 aa9.49□□□□□ -0.89
RNF4-208ENST00000507247 MIAQ16674 131 aa9.49□□□□□ -0.89
RNF4-208ENST00000507247 TRAV8-3A0A0A6YYJ7 113 aa9.48□□□□□ -0.89
RNF4-208ENST00000507247 H0Y8G0 127 aa9.48□□□□□ -0.89
RNF4-208ENST00000507247 PRSS1P07477 247 aa9.48□□□□□ -0.89
RNF4-208ENST00000507247 KRTAP26-1Q6PEX3 210 aa9.48□□□□□ -0.89
RNF4-208ENST00000507247 SPATA12Q7Z6I5 190 aa9.48□□□□□ -0.89
RNF4-208ENST00000507247 C2orf88Q9BSF0 95 aa9.48□□□□□ -0.89
RNF4-208ENST00000507247 CCL25O15444 150 aa9.47□□□□□ -0.89
RNF4-208ENST00000507247 C3orf79P0CE67 100 aa9.47□□□□□ -0.89
RNF4-208ENST00000507247 CHCHD10Q8WYQ3 142 aaPredicted RBP9.47□□□□□ -0.89
RNF4-208ENST00000507247 MAP1LC3CQ9BXW4 147 aa9.47□□□□□ -0.89
RNF4-208ENST00000507247 KMT2AQ03164 3969 aa9.47□□□□□ -0.89
RNF4-208ENST00000507247 IGKV2D-24A0A075B6R9 120 aa9.46□□□□□ -0.9
RNF4-208ENST00000507247 TRAV12-1A0A0B4J245 112 aa9.46□□□□□ -0.9
RNF4-208ENST00000507247 TRAV8-4A0A0B4J246 113 aa9.46□□□□□ -0.9
RNF4-208ENST00000507247 A0A0J9YXV3 536 aa9.46□□□□□ -0.9
RNF4-208ENST00000507247 SS18Q15532 418 aa9.46□□□□□ -0.9
RNF4-208ENST00000507247 LINC00242Q5T6M2 205 aa9.46□□□□□ -0.9
RNF4-208ENST00000507247 FAM19A3Q7Z5A8 133 aa9.46□□□□□ -0.9
RNF4-208ENST00000507247 C1orf43Q9BWL3 253 aa9.46□□□□□ -0.9
RNF4-208ENST00000507247 IGLV4-69A0A075B6H9 119 aa9.45□□□□□ -0.9
RNF4-208ENST00000507247 SYS1-DBNDD2H3BUS1 97 aa9.45□□□□□ -0.9
RNF4-208ENST00000507247 XCL1P47992 114 aa9.45□□□□□ -0.9
RNF4-208ENST00000507247 KRTDAPP60985 99 aa9.45□□□□□ -0.9
RNF4-208ENST00000507247 COX6A2Q02221 97 aa9.45□□□□□ -0.9
RNF4-208ENST00000507247 ODF1Q14990 250 aa9.45□□□□□ -0.9
RNF4-208ENST00000507247 Q6ZRN7 208 aaPredicted RBP9.45□□□□□ -0.9
RNF4-208ENST00000507247 C6orf223Q8N319 242 aa9.45□□□□□ -0.9
RNF4-208ENST00000507247 CHTOPQ9Y3Y2 248 aaKnown RBP9.45□□□□□ -0.9
RNF4-208ENST00000507247 GAGE12HA6NDE8 117 aa9.44□□□□□ -0.9
RNF4-208ENST00000507247 FOXI1Q12951 378 aa9.44□□□□□ -0.9
RNF4-208ENST00000507247 RMI2Q96E14 147 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms