RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 LAGE3Q14657 143 aa6.3□□□□□ -1.4
CLCN3-205ENST00000506924 FRZBQ92765 325 aa6.3□□□□□ -1.4
CLCN3-205ENST00000506924 SEC11CQ9BY50 192 aa6.3□□□□□ -1.4
CLCN3-205ENST00000506924 IGKV2D-24A0A075B6R9 120 aa6.29□□□□□ -1.4
CLCN3-205ENST00000506924 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.29□□□□□ -1.4
CLCN3-205ENST00000506924 A0A087WTM6 91 aa6.29□□□□□ -1.4
CLCN3-205ENST00000506924 TRAV8-3A0A0A6YYJ7 113 aa6.29□□□□□ -1.4
CLCN3-205ENST00000506924 TRBV6-5A0A0K0K1A5 114 aa6.29□□□□□ -1.4
CLCN3-205ENST00000506924 A0A1B0GW15 77 aa6.29□□□□□ -1.4
CLCN3-205ENST00000506924 IGKV2-29A2NJV5 120 aaPredicted RBP6.29□□□□□ -1.4
CLCN3-205ENST00000506924 UBE2L6O14933 153 aa6.29□□□□□ -1.4
CLCN3-205ENST00000506924 CKS2P33552 79 aa6.29□□□□□ -1.4
CLCN3-205ENST00000506924 ENHOQ6UWT2 76 aa6.29□□□□□ -1.4
CLCN3-205ENST00000506924 LINC00269Q8N2A0 174 aa6.29□□□□□ -1.4
CLCN3-205ENST00000506924 TMEM70Q9BUB7 260 aa6.29□□□□□ -1.4
CLCN3-205ENST00000506924 CHCHD7Q9BUK0 85 aa6.29□□□□□ -1.4
CLCN3-205ENST00000506924 TMEM242Q9NWH2 141 aa6.29□□□□□ -1.4
CLCN3-205ENST00000506924 IGLV4-60A0A075B6I1 120 aa6.28□□□□□ -1.4
CLCN3-205ENST00000506924 C16orf90A8MZG2 172 aa6.28□□□□□ -1.4
CLCN3-205ENST00000506924 D6R8Y8 96 aa6.28□□□□□ -1.4
CLCN3-205ENST00000506924 I3L3M4 83 aa6.28□□□□□ -1.4
CLCN3-205ENST00000506924 TSHBP01222 138 aa6.28□□□□□ -1.4
CLCN3-205ENST00000506924 CRPP02741 224 aa6.28□□□□□ -1.4
CLCN3-205ENST00000506924 APCSP02743 223 aa6.28□□□□□ -1.4
CLCN3-205ENST00000506924 S100A8P05109 93 aa6.28□□□□□ -1.4
CLCN3-205ENST00000506924 WFDC2Q14508 124 aa6.28□□□□□ -1.4
CLCN3-205ENST00000506924 ELOBQ15370 118 aa6.28□□□□□ -1.4
CLCN3-205ENST00000506924 MAPKAPK5-AS1Q8N8E1 139 aa6.28□□□□□ -1.4
CLCN3-205ENST00000506924 BAALCQ8WXS3 180 aa6.28□□□□□ -1.4
CLCN3-205ENST00000506924 DNAH11Q96DT5 4516 aa6.27□□□□□ -1.41
CLCN3-205ENST00000506924 IGKV3OR2-268A0A0C4DH90 116 aa6.27□□□□□ -1.41
CLCN3-205ENST00000506924 LRCOL1A6NCL2 159 aa6.27□□□□□ -1.41
CLCN3-205ENST00000506924 SCGB1D1O95968 90 aa6.27□□□□□ -1.41
CLCN3-205ENST00000506924 POLR2KP53803 58 aaKnown RBP6.27□□□□□ -1.41
CLCN3-205ENST00000506924 PKIAP61925 76 aa6.27□□□□□ -1.41
CLCN3-205ENST00000506924 C10orf91Q5T1B1 145 aa6.27□□□□□ -1.41
CLCN3-205ENST00000506924 RNASEKQ6P5S7 137 aaKnown RBP6.27□□□□□ -1.41
CLCN3-205ENST00000506924 ATP5L2Q7Z4Y8 100 aa6.27□□□□□ -1.41
CLCN3-205ENST00000506924 C20orf203Q8NBC4 194 aa6.27□□□□□ -1.41
CLCN3-205ENST00000506924 BTF3L4Q96K17 158 aa6.27□□□□□ -1.41
CLCN3-205ENST00000506924 IGLV10-54A0A075B6I4 117 aa6.26□□□□□ -1.41
CLCN3-205ENST00000506924 C7orf77A4D0Y5 90 aa6.26□□□□□ -1.41
CLCN3-205ENST00000506924 VCYO14598 125 aa6.26□□□□□ -1.41
CLCN3-205ENST00000506924 NPYP01303 97 aa6.26□□□□□ -1.41
CLCN3-205ENST00000506924 FCER1GP30273 86 aa6.26□□□□□ -1.41
CLCN3-205ENST00000506924 AMMECR1LQ6DCA0 310 aa6.26□□□□□ -1.41
CLCN3-205ENST00000506924 RMI2Q96E14 147 aa6.26□□□□□ -1.41
CLCN3-205ENST00000506924 RPS10P5Q9NQ39 176 aa6.26□□□□□ -1.41
CLCN3-205ENST00000506924 CARHSP1Q9Y2V2 147 aaKnown RBP6.26□□□□□ -1.41
CLCN3-205ENST00000506924 IGLV5-52A0A0A0MRZ9 124 aa6.25□□□□□ -1.41
CLCN3-205ENST00000506924 TRBV27A0A0K0K1C4 114 aa6.25□□□□□ -1.41
CLCN3-205ENST00000506924 PPP1R17O96001 155 aa6.25□□□□□ -1.41
CLCN3-205ENST00000506924 APOC3P02656 99 aa6.25□□□□□ -1.41
CLCN3-205ENST00000506924 FGF6P10767 208 aa6.25□□□□□ -1.41
CLCN3-205ENST00000506924 REG3AQ06141 175 aa6.25□□□□□ -1.41
CLCN3-205ENST00000506924 Q0VG73 95 aa6.25□□□□□ -1.41
CLCN3-205ENST00000506924 TMEM136Q6ZRR5 245 aa6.25□□□□□ -1.41
CLCN3-205ENST00000506924 PKHD1P08F94 4074 aa6.25□□□□□ -1.41
CLCN3-205ENST00000506924 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.24□□□□□ -1.41
CLCN3-205ENST00000506924 LOC389332A0A1B0GUA5 103 aa6.24□□□□□ -1.41
CLCN3-205ENST00000506924 A0A1B0GUV1 79 aa6.24□□□□□ -1.41
CLCN3-205ENST00000506924 TCAPO15273 167 aa6.24□□□□□ -1.41
CLCN3-205ENST00000506924 HLA-DQA1P01909 254 aa6.24□□□□□ -1.41
CLCN3-205ENST00000506924 ESDP10768 282 aa6.24□□□□□ -1.41
CLCN3-205ENST00000506924 KIAA1644Q3SXP7 199 aa6.24□□□□□ -1.41
CLCN3-205ENST00000506924 ORMDL3Q8N138 153 aa6.24□□□□□ -1.41
CLCN3-205ENST00000506924 Q8N814 137 aa6.24□□□□□ -1.41
CLCN3-205ENST00000506924 PRELID3AQ96N28 172 aa6.24□□□□□ -1.41
CLCN3-205ENST00000506924 IMMP2LQ96T52 175 aa6.24□□□□□ -1.41
CLCN3-205ENST00000506924 KIR2DL4Q99706 377 aa6.24□□□□□ -1.41
CLCN3-205ENST00000506924 PRR34Q9NV39 138 aa6.24□□□□□ -1.41
CLCN3-205ENST00000506924 TRBV24-1A0A075B6N3 115 aa6.23□□□□□ -1.41
CLCN3-205ENST00000506924 S100PP25815 95 aa6.23□□□□□ -1.41
CLCN3-205ENST00000506924 RHEBQ15382 184 aa6.23□□□□□ -1.41
CLCN3-205ENST00000506924 MIAQ16674 131 aa6.23□□□□□ -1.41
CLCN3-205ENST00000506924 SLC7A5P1Q8MH63 180 aa6.23□□□□□ -1.41
CLCN3-205ENST00000506924 C20orf78Q9BR46 151 aa6.23□□□□□ -1.41
CLCN3-205ENST00000506924 SMIM2Q9BVW6 85 aa6.23□□□□□ -1.41
CLCN3-205ENST00000506924 IGKV2D-30A0A075B6S6 120 aa6.22□□□□□ -1.41
CLCN3-205ENST00000506924 PPBPP02775 128 aa6.22□□□□□ -1.41
CLCN3-205ENST00000506924 RNASE13Q5GAN3 156 aaKnown RBP6.22□□□□□ -1.41
CLCN3-205ENST00000506924 TMEM101Q96IK0 257 aa6.22□□□□□ -1.41
CLCN3-205ENST00000506924 DYNC1H1Q14204 4646 aaKnown RBP6.22□□□□□ -1.41
CLCN3-205ENST00000506924 IGLV5-37A0A075B6J1 123 aa6.21□□□□□ -1.42
CLCN3-205ENST00000506924 H7C423 109 aa6.21□□□□□ -1.42
CLCN3-205ENST00000506924 KRTAP10-1P60331 282 aa6.21□□□□□ -1.42
CLCN3-205ENST00000506924 RPL39P62891 51 aaKnown RBP6.21□□□□□ -1.42
CLCN3-205ENST00000506924 NDUFA5Q16718 116 aa6.21□□□□□ -1.42
CLCN3-205ENST00000506924 LINC01620Q4KN68 170 aa6.21□□□□□ -1.42
CLCN3-205ENST00000506924 KRTAP26-1Q6PEX3 210 aa6.21□□□□□ -1.42
CLCN3-205ENST00000506924 OR5A1Q8NGJ0 315 aa6.21□□□□□ -1.42
CLCN3-205ENST00000506924 KIAA1109Q2LD37 5005 aa6.21□□□□□ -1.42
CLCN3-205ENST00000506924 TGIF2-C20orf24A0A0A6YYL0 155 aa6.2□□□□□ -1.42
CLCN3-205ENST00000506924 PHOX2AO14813 284 aa6.2□□□□□ -1.42
CLCN3-205ENST00000506924 RPL32P62910 135 aaKnown RBP6.2□□□□□ -1.42
CLCN3-205ENST00000506924 LCE1AQ5T7P2 110 aa6.2□□□□□ -1.42
CLCN3-205ENST00000506924 SVBPQ8N300 66 aa6.2□□□□□ -1.42
CLCN3-205ENST00000506924 MAP1LC3AQ9H492 121 aa6.2□□□□□ -1.42
CLCN3-205ENST00000506924 DNAH5Q8TE73 4624 aa6.2□□□□□ -1.42
CLCN3-205ENST00000506924 TRAV9-1A0A075B6T8 112 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms