RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 TMEM97Q5BJF2 176 aa5.95□□□□□ -1.46
SCAMP1-202ENST00000506858 RNASE13Q5GAN3 156 aaKnown RBP5.95□□□□□ -1.46
SCAMP1-202ENST00000506858 C20orf203Q8NBC4 194 aa5.95□□□□□ -1.46
SCAMP1-202ENST00000506858 LAMTOR2Q9Y2Q5 125 aa5.95□□□□□ -1.46
SCAMP1-202ENST00000506858 PRSS47A8MTI9 375 aa5.94□□□□□ -1.46
SCAMP1-202ENST00000506858 ANGP03950 147 aaKnown RBP5.94□□□□□ -1.46
SCAMP1-202ENST00000506858 RPL32P62910 135 aaKnown RBP5.94□□□□□ -1.46
SCAMP1-202ENST00000506858 PMCHL1Q16048 86 aa5.94□□□□□ -1.46
SCAMP1-202ENST00000506858 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
SCAMP1-202ENST00000506858 UBE2WQ96B02 151 aa5.94□□□□□ -1.46
SCAMP1-202ENST00000506858 ZC2HC1BQ5TFG8 222 aa5.93□□□□□ -1.46
SCAMP1-202ENST00000506858 AMMECR1LQ6DCA0 310 aa5.93□□□□□ -1.46
SCAMP1-202ENST00000506858 LINC00269Q8N2A0 174 aa5.93□□□□□ -1.46
SCAMP1-202ENST00000506858 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.93□□□□□ -1.46
SCAMP1-202ENST00000506858 IBA57-AS1B1ANH7 110 aa5.92□□□□□ -1.46
SCAMP1-202ENST00000506858 LAGE3Q14657 143 aa5.92□□□□□ -1.46
SCAMP1-202ENST00000506858 ENHOQ6UWT2 76 aa5.92□□□□□ -1.46
SCAMP1-202ENST00000506858 FA2HQ7L5A8 372 aa5.92□□□□□ -1.46
SCAMP1-202ENST00000506858 FAM104AQ969W3 186 aa5.92□□□□□ -1.46
SCAMP1-202ENST00000506858 NXT2Q9NPJ8 142 aaKnown RBP5.92□□□□□ -1.46
SCAMP1-202ENST00000506858 IGLV10-54A0A075B6I4 117 aa5.92□□□□□ -1.46
SCAMP1-202ENST00000506858 TRAV9-2A0A087WT02 112 aa5.92□□□□□ -1.46
SCAMP1-202ENST00000506858 RTL8CO15255 209 aa5.92□□□□□ -1.46
SCAMP1-202ENST00000506858 NUPR1O60356 82 aa5.92□□□□□ -1.46
SCAMP1-202ENST00000506858 BTF3P20290 206 aaKnown RBP5.92□□□□□ -1.46
SCAMP1-202ENST00000506858 Q6ZUT4 128 aa5.92□□□□□ -1.46
SCAMP1-202ENST00000506858 UBE2D4Q9Y2X8 147 aa5.92□□□□□ -1.46
SCAMP1-202ENST00000506858 PKD1P98161 4303 aa5.91□□□□□ -1.46
SCAMP1-202ENST00000506858 LINC00614P0C842 121 aa5.91□□□□□ -1.46
SCAMP1-202ENST00000506858 LINC00310P59036 64 aa5.91□□□□□ -1.46
SCAMP1-202ENST00000506858 TTC32Q5I0X7 151 aa5.91□□□□□ -1.46
SCAMP1-202ENST00000506858 C1orf134Q5TEV5 83 aa5.91□□□□□ -1.46
SCAMP1-202ENST00000506858 C2orf66Q6UXQ4 117 aa5.91□□□□□ -1.46
SCAMP1-202ENST00000506858 BAGE3Q86Y29 109 aa5.91□□□□□ -1.46
SCAMP1-202ENST00000506858 C6orf223Q8N319 242 aa5.91□□□□□ -1.46
SCAMP1-202ENST00000506858 A0A096LNJ9 63 aa5.9□□□□□ -1.46
SCAMP1-202ENST00000506858 A0A1B0GUV1 79 aa5.9□□□□□ -1.46
SCAMP1-202ENST00000506858 HIST1H2BKO60814 126 aa5.9□□□□□ -1.46
SCAMP1-202ENST00000506858 HIST1H2BJP06899 126 aa5.9□□□□□ -1.46
SCAMP1-202ENST00000506858 HIST1H2BOP23527 126 aa5.9□□□□□ -1.46
SCAMP1-202ENST00000506858 HIST1H2BBP33778 126 aa5.9□□□□□ -1.46
SCAMP1-202ENST00000506858 FUSP35637 526 aaKnown RBP eCLIP5.9□□□□□ -1.46
SCAMP1-202ENST00000506858 HIST1H2BDP58876 126 aa5.9□□□□□ -1.46
SCAMP1-202ENST00000506858 HIST1H2BCP62807 126 aa5.9□□□□□ -1.46
SCAMP1-202ENST00000506858 HIST2H2BEQ16778 126 aa5.9□□□□□ -1.46
SCAMP1-202ENST00000506858 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.9□□□□□ -1.46
SCAMP1-202ENST00000506858 DGAT2L7PQ6IED9 249 aa5.9□□□□□ -1.46
SCAMP1-202ENST00000506858 Q6ZRN7 208 aaPredicted RBP5.9□□□□□ -1.46
SCAMP1-202ENST00000506858 OR5A1Q8NGJ0 315 aa5.9□□□□□ -1.46
SCAMP1-202ENST00000506858 HIST1H2BHQ93079 126 aa5.9□□□□□ -1.46
SCAMP1-202ENST00000506858 HIST1H2BNQ99877 126 aa5.9□□□□□ -1.46
SCAMP1-202ENST00000506858 HIST1H2BMQ99879 126 aa5.9□□□□□ -1.46
SCAMP1-202ENST00000506858 CDC42SE2Q9NRR3 84 aa5.9□□□□□ -1.46
SCAMP1-202ENST00000506858 IGKV2D-24A0A075B6R9 120 aa5.89□□□□□ -1.47
SCAMP1-202ENST00000506858 LECT2O14960 151 aa5.89□□□□□ -1.47
SCAMP1-202ENST00000506858 SERF1AO75920 110 aa5.89□□□□□ -1.47
SCAMP1-202ENST00000506858 REG3AQ06141 175 aa5.89□□□□□ -1.47
SCAMP1-202ENST00000506858 ORMDL2Q53FV1 153 aa5.89□□□□□ -1.47
SCAMP1-202ENST00000506858 FAM19A2Q8N3H0 131 aa5.89□□□□□ -1.47
SCAMP1-202ENST00000506858 C10orf126Q8N4M7 172 aa5.89□□□□□ -1.47
SCAMP1-202ENST00000506858 MAPKAPK5-AS1Q8N8E1 139 aa5.89□□□□□ -1.47
SCAMP1-202ENST00000506858 TMEM101Q96IK0 257 aa5.89□□□□□ -1.47
SCAMP1-202ENST00000506858 LINC01546A6NGU7 62 aa5.88□□□□□ -1.47
SCAMP1-202ENST00000506858 H7C423 109 aa5.88□□□□□ -1.47
SCAMP1-202ENST00000506858 CRPP02741 224 aa5.88□□□□□ -1.47
SCAMP1-202ENST00000506858 WFDC2Q14508 124 aa5.88□□□□□ -1.47
SCAMP1-202ENST00000506858 MRPL52Q86TS9 123 aaKnown RBP5.88□□□□□ -1.47
SCAMP1-202ENST00000506858 ZNF664Q8N3J9 261 aa5.88□□□□□ -1.47
SCAMP1-202ENST00000506858 AP5S1Q9NUS5 200 aa5.88□□□□□ -1.47
SCAMP1-202ENST00000506858 CYSLTR1Q9Y271 337 aa5.88□□□□□ -1.47
SCAMP1-202ENST00000506858 IGLV4-3A0A075B6K6 122 aa5.88□□□□□ -1.47
SCAMP1-202ENST00000506858 TRAV13-1A0A0B4J241 112 aa5.88□□□□□ -1.47
SCAMP1-202ENST00000506858 IGIPA6NJ69 53 aa5.88□□□□□ -1.47
SCAMP1-202ENST00000506858 Q0VG73 95 aa5.88□□□□□ -1.47
SCAMP1-202ENST00000506858 LINC00173Q6ZV60 143 aa5.88□□□□□ -1.47
SCAMP1-202ENST00000506858 PRR34Q9NV39 138 aa5.88□□□□□ -1.47
SCAMP1-202ENST00000506858 DNAH5Q8TE73 4624 aa5.87□□□□□ -1.47
SCAMP1-202ENST00000506858 PRSS29PA6NIE9 313 aa5.87□□□□□ -1.47
SCAMP1-202ENST00000506858 PKIAP61925 76 aa5.87□□□□□ -1.47
SCAMP1-202ENST00000506858 KRTAP26-1Q6PEX3 210 aa5.87□□□□□ -1.47
SCAMP1-202ENST00000506858 BAALCQ8WXS3 180 aa5.87□□□□□ -1.47
SCAMP1-202ENST00000506858 TMEM18Q96B42 140 aa5.87□□□□□ -1.47
SCAMP1-202ENST00000506858 TOMM6Q96B49 74 aa5.87□□□□□ -1.47
SCAMP1-202ENST00000506858 SCGB3A1Q96QR1 104 aa5.87□□□□□ -1.47
SCAMP1-202ENST00000506858 HECTD4Q9Y4D8 3996 aa5.87□□□□□ -1.47
SCAMP1-202ENST00000506858 PKHD1P08F94 4074 aa5.86□□□□□ -1.47
SCAMP1-202ENST00000506858 DYNC1H1Q14204 4646 aaKnown RBP5.86□□□□□ -1.47
SCAMP1-202ENST00000506858 TRAV8-3A0A0A6YYJ7 113 aa5.86□□□□□ -1.47
SCAMP1-202ENST00000506858 LINC00959A0A1B0GUT2 108 aa5.86□□□□□ -1.47
SCAMP1-202ENST00000506858 ZNF25P17030 456 aaPredicted RBP5.86□□□□□ -1.47
SCAMP1-202ENST00000506858 XCL1P47992 114 aa5.86□□□□□ -1.47
SCAMP1-202ENST00000506858 NDUFA6P56556 154 aa5.86□□□□□ -1.47
SCAMP1-202ENST00000506858 RAB5BP61020 215 aa5.86□□□□□ -1.47
SCAMP1-202ENST00000506858 TIMM21Q9BVV7 248 aa5.86□□□□□ -1.47
SCAMP1-202ENST00000506858 SPANXA1Q9NS26 97 aa5.86□□□□□ -1.47
SCAMP1-202ENST00000506858 EPPK1P58107 5090 aaKnown RBP5.86□□□□□ -1.47
SCAMP1-202ENST00000506858 GAGE12HA6NDE8 117 aa5.85□□□□□ -1.47
SCAMP1-202ENST00000506858 C1orf196B1AJZ1 125 aa5.85□□□□□ -1.47
SCAMP1-202ENST00000506858 K7EMI3 77 aa5.85□□□□□ -1.47
SCAMP1-202ENST00000506858 CCL25O15444 150 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms