RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 GNRH2O43555 120 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 ATP5LO75964 103 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 LEPROTL1O95214 131 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 RBMY1DP0C7P1 496 aaKnown RBP1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 RBMY1A1P0DJD3 496 aaKnown RBP1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 HTN1P15515 57 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 EVI2AP22794 236 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 SMAGPQ0VAQ4 97 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 JOSD1Q15040 202 aaPredicted RBP1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 RRN3P1Q2M238 152 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 LGALS9BQ3B8N2 356 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 ORMDL2Q53FV1 153 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 RNASEKQ6P5S7 137 aaKnown RBP1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 AMTNQ6UX39 209 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 ZFP2Q6ZN57 461 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 AMN1Q8IY45 258 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 C18orf32Q8TCD1 76 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 DNAJC30Q96LL9 226 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 C12orf57Q99622 126 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 ST20Q9HBF5 79 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 TIMM8BQ9Y5J9 83 aaPredicted RBP1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 NACAE9PAV3 2078 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 PKD1L1Q8TDX9 2849 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 DCHS2Q6V1P9 2916 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 OTOGQ6ZRI0 2925 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 A0A096LNJ9 63 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 TRBV10-1A0A0K0K1A3 114 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 TRBV6-5A0A0K0K1A5 114 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 LOC389332A0A1B0GUA5 103 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 LINC01546A6NGU7 62 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 KNCNA6PVL3 124 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 COL6A5A8TX70 2615 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 CRXO43186 299 aaPredicted RBP1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 HBDP02042 147 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 MGPP08493 103 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 RNASE3P12724 160 aaKnown RBP1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 HIVEP1P15822 2718 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 FCER1GP30273 86 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 RPL13AP40429 203 aaKnown RBP1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 KRTDAPP60985 99 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 REG3AQ06141 175 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 MRPL51Q4U2R6 128 aaKnown RBP1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 TMEM97Q5BJF2 176 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 PDZD11Q5EBL8 140 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 GDF5OSQ5U4N7 250 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 TET2Q6N021 2002 aaPredicted RBP1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 SPATA12Q7Z6I5 190 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 Q8N8P6 123 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 OR4C5Q8NGB2 326 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 TMEM263Q8WUH6 116 aaKnown RBP1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 TMEM70Q9BUB7 260 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 EDA2RQ9HAV5 297 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 CELSR2Q9HCU4 2923 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 NIT2Q9NQR4 276 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 XCL2Q9UBD3 114 aa1.53□□□□□ -2.16
TOPBP1-205ENST00000506779 CRYBG3Q68DQ2 2970 aa1.53□□□□□ -2.17
TOPBP1-205ENST00000506779 TLN2Q9Y4G6 2542 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 F8P00451 2351 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 NBEAL2Q6ZNJ1 2754 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 FLNAP21333 2647 aaKnown RBP1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 TRGV2A0A075B6R0 118 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 TRAV26-1A0A087WT03 109 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 IGHV1-24A0A0C4DH33 117 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 MUC21A0A0G2JKD1 596 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 TRBV27A0A0K0K1C4 114 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 MUC21A0A140T8X8 626 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 TRBV6-4A0A1B0GX49 114 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 LYRM9A8MSI8 78 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 SYS1-DBNDD2H3BUS1 97 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 I3L3M4 83 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 M0QY20 66 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 NCR2O95944 276 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 IGHV3-53P01767 116 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 CRYGDP07320 174 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 PRB4P10163 310 aaPredicted RBP1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 MIFP14174 115 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 PLNP26678 52 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 IFI27P40305 119 aaPredicted RBP1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 CRYBA4P53673 196 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 FXYD7P58549 80 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 DEFB1P60022 68 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 PKIAP61925 76 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 RHOHQ15669 191 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 ZNF56Q15929 161 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 PYY3Q5JQD4 70 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 PRR9Q5T870 116 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 FAM74A4Q5TZK3 123 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 ZNF705AQ6ZN79 300 aaPredicted RBP1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 Q6ZN92 141 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 CAMK2N1Q7Z7J9 78 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 DAZ4Q86SG3 579 aaKnown RBP1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 FAM19A2Q8N3H0 131 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 IFI27L1Q96BM0 104 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 TMEM141Q96I45 108 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 C18orf15Q96N68 181 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 PRADC1Q9BSG0 188 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 VAMP8Q9BV40 100 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 SMIM2Q9BVW6 85 aa1.52□□□□□ -2.17
TOPBP1-205ENST00000506779 CYSLTR1Q9Y271 337 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms