RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 COX19Q49B96 90 aa3.81□□□□□ -1.8
USP46-206ENST00000506707 NFE4Q86UQ8 179 aa3.81□□□□□ -1.8
USP46-206ENST00000506707 MAPKAPK5-AS1Q8N8E1 139 aa3.81□□□□□ -1.8
USP46-206ENST00000506707 UBE2WQ96B02 151 aa3.81□□□□□ -1.8
USP46-206ENST00000506707 KIR2DL4Q99706 377 aa3.81□□□□□ -1.8
USP46-206ENST00000506707 SMIM2Q9BVW6 85 aa3.81□□□□□ -1.8
USP46-206ENST00000506707 Q9HAA7 133 aa3.81□□□□□ -1.8
USP46-206ENST00000506707 PRR34Q9NV39 138 aa3.81□□□□□ -1.8
USP46-206ENST00000506707 LAMTOR2Q9Y2Q5 125 aa3.81□□□□□ -1.8
USP46-206ENST00000506707 PKD1P98161 4303 aa3.81□□□□□ -1.8
USP46-206ENST00000506707 DNAH11Q96DT5 4516 aa3.8□□□□□ -1.8
USP46-206ENST00000506707 LOC389332A0A1B0GUA5 103 aa3.8□□□□□ -1.8
USP46-206ENST00000506707 TCAPO15273 167 aa3.8□□□□□ -1.8
USP46-206ENST00000506707 FGF6P10767 208 aa3.8□□□□□ -1.8
USP46-206ENST00000506707 FCER1GP30273 86 aa3.8□□□□□ -1.8
USP46-206ENST00000506707 CBLN2Q8IUK8 224 aa3.8□□□□□ -1.8
USP46-206ENST00000506707 LINC00269Q8N2A0 174 aa3.8□□□□□ -1.8
USP46-206ENST00000506707 ALKBH7Q9BT30 221 aaPredicted RBP3.8□□□□□ -1.8
USP46-206ENST00000506707 SMCO4Q9NRQ5 59 aa3.8□□□□□ -1.8
USP46-206ENST00000506707 LRCOL1A6NCL2 159 aa3.79□□□□□ -1.8
USP46-206ENST00000506707 UBE2L6O14933 153 aa3.79□□□□□ -1.8
USP46-206ENST00000506707 MT-ND6P03923 174 aa3.79□□□□□ -1.8
USP46-206ENST00000506707 IFI27P40305 119 aaPredicted RBP3.79□□□□□ -1.8
USP46-206ENST00000506707 REG3AQ06141 175 aa3.79□□□□□ -1.8
USP46-206ENST00000506707 Q0VG73 95 aa3.79□□□□□ -1.8
USP46-206ENST00000506707 FABP9Q0Z7S8 132 aa3.79□□□□□ -1.8
USP46-206ENST00000506707 KRTAP26-1Q6PEX3 210 aa3.79□□□□□ -1.8
USP46-206ENST00000506707 MRPL52Q86TS9 123 aaKnown RBP3.79□□□□□ -1.8
USP46-206ENST00000506707 Q8N8P6 123 aa3.79□□□□□ -1.8
USP46-206ENST00000506707 FAM104AQ969W3 186 aa3.79□□□□□ -1.8
USP46-206ENST00000506707 TM2D2Q9BX73 214 aa3.79□□□□□ -1.8
USP46-206ENST00000506707 MAP1LC3AQ9H492 121 aa3.79□□□□□ -1.8
USP46-206ENST00000506707 CDC42SE2Q9NRR3 84 aa3.79□□□□□ -1.8
USP46-206ENST00000506707 UBE2D4Q9Y2X8 147 aa3.79□□□□□ -1.8
USP46-206ENST00000506707 CSDC2Q9Y534 153 aaKnown RBP3.79□□□□□ -1.8
USP46-206ENST00000506707 TRAPPC1Q9Y5R8 145 aa3.79□□□□□ -1.8
USP46-206ENST00000506707 IGKV2D-24A0A075B6R9 120 aa3.78□□□□□ -1.8
USP46-206ENST00000506707 A0A087WTM6 91 aa3.78□□□□□ -1.8
USP46-206ENST00000506707 LINC01546A6NGU7 62 aa3.78□□□□□ -1.8
USP46-206ENST00000506707 COLCA2A8K830 154 aa3.78□□□□□ -1.8
USP46-206ENST00000506707 ZNF25P17030 456 aaPredicted RBP3.78□□□□□ -1.8
USP46-206ENST00000506707 RAB5AP20339 215 aa3.78□□□□□ -1.8
USP46-206ENST00000506707 RPL39P62891 51 aaKnown RBP3.78□□□□□ -1.8
USP46-206ENST00000506707 MIAQ16674 131 aa3.78□□□□□ -1.8
USP46-206ENST00000506707 AMMECR1LQ6DCA0 310 aa3.78□□□□□ -1.8
USP46-206ENST00000506707 RNASEKQ6P5S7 137 aaKnown RBP3.78□□□□□ -1.8
USP46-206ENST00000506707 CLPSL2Q6UWE3 100 aa3.78□□□□□ -1.8
USP46-206ENST00000506707 ZNF664Q8N3J9 261 aa3.78□□□□□ -1.8
USP46-206ENST00000506707 TIMM21Q9BVV7 248 aa3.78□□□□□ -1.8
USP46-206ENST00000506707 NXT2Q9NPJ8 142 aaKnown RBP3.78□□□□□ -1.8
USP46-206ENST00000506707 COX11Q9Y6N1 276 aa3.78□□□□□ -1.8
USP46-206ENST00000506707 HECTD4Q9Y4D8 3996 aa3.78□□□□□ -1.81
USP46-206ENST00000506707 IGLV10-54A0A075B6I4 117 aa3.77□□□□□ -1.81
USP46-206ENST00000506707 TRAV8-4A0A0B4J246 113 aa3.77□□□□□ -1.81
USP46-206ENST00000506707 K7EMI3 77 aa3.77□□□□□ -1.81
USP46-206ENST00000506707 PSCAO43653 123 aa3.77□□□□□ -1.81
USP46-206ENST00000506707 CRPP02741 224 aa3.77□□□□□ -1.81
USP46-206ENST00000506707 WFDC2Q14508 124 aa3.77□□□□□ -1.81
USP46-206ENST00000506707 OR5A1Q8NGJ0 315 aa3.77□□□□□ -1.81
USP46-206ENST00000506707 PRSS3P2Q8NHM4 247 aa3.77□□□□□ -1.81
USP46-206ENST00000506707 BAALCQ8WXS3 180 aa3.77□□□□□ -1.81
USP46-206ENST00000506707 TMEM18Q96B42 140 aa3.77□□□□□ -1.81
USP46-206ENST00000506707 RMI2Q96E14 147 aa3.77□□□□□ -1.81
USP46-206ENST00000506707 TMEM101Q96IK0 257 aa3.77□□□□□ -1.81
USP46-206ENST00000506707 OPRPNQ99935 248 aaPredicted RBP3.77□□□□□ -1.81
USP46-206ENST00000506707 C1orf43Q9BWL3 253 aa3.77□□□□□ -1.81
USP46-206ENST00000506707 IGKV3OR2-268A0A0C4DH90 116 aa3.76□□□□□ -1.81
USP46-206ENST00000506707 LINC00959A0A1B0GUT2 108 aa3.76□□□□□ -1.81
USP46-206ENST00000506707 SCO1O75880 301 aa3.76□□□□□ -1.81
USP46-206ENST00000506707 MRPS36P82909 103 aaKnown RBP3.76□□□□□ -1.81
USP46-206ENST00000506707 ORMDL2Q53FV1 153 aa3.76□□□□□ -1.81
USP46-206ENST00000506707 DGAT2L7PQ6IED9 249 aa3.76□□□□□ -1.81
USP46-206ENST00000506707 SPATA12Q7Z6I5 190 aa3.76□□□□□ -1.81
USP46-206ENST00000506707 C18orf32Q8TCD1 76 aa3.76□□□□□ -1.81
USP46-206ENST00000506707 URB1-AS1Q96HZ7 61 aa3.76□□□□□ -1.81
USP46-206ENST00000506707 SPANXA1Q9NS26 97 aa3.76□□□□□ -1.81
USP46-206ENST00000506707 PYGO1Q9Y3Y4 419 aa3.76□□□□□ -1.81
USP46-206ENST00000506707 IGIPA6NJ69 53 aa3.75□□□□□ -1.81
USP46-206ENST00000506707 LECT2O14960 151 aa3.75□□□□□ -1.81
USP46-206ENST00000506707 TRGC2P03986 189 aa3.75□□□□□ -1.81
USP46-206ENST00000506707 LINC00614P0C842 121 aa3.75□□□□□ -1.81
USP46-206ENST00000506707 FUSP35637 526 aaKnown RBP eCLIP3.75□□□□□ -1.81
USP46-206ENST00000506707 SMAGPQ0VAQ4 97 aa3.75□□□□□ -1.81
USP46-206ENST00000506707 RNASE13Q5GAN3 156 aaKnown RBP3.75□□□□□ -1.81
USP46-206ENST00000506707 C2orf66Q6UXQ4 117 aa3.75□□□□□ -1.81
USP46-206ENST00000506707 Q6ZUT4 128 aa3.75□□□□□ -1.81
USP46-206ENST00000506707 Q8N814 137 aa3.75□□□□□ -1.81
USP46-206ENST00000506707 CHCHD10Q8WYQ3 142 aaPredicted RBP3.75□□□□□ -1.81
USP46-206ENST00000506707 TOMM6Q96B49 74 aa3.75□□□□□ -1.81
USP46-206ENST00000506707 CYSLTR1Q9Y271 337 aa3.75□□□□□ -1.81
USP46-206ENST00000506707 PKHD1P08F94 4074 aa3.75□□□□□ -1.81
USP46-206ENST00000506707 DYNC1H1Q14204 4646 aaKnown RBP3.75□□□□□ -1.81
USP46-206ENST00000506707 IGLV4-3A0A075B6K6 122 aa3.74□□□□□ -1.81
USP46-206ENST00000506707 A0A096LNJ9 63 aa3.74□□□□□ -1.81
USP46-206ENST00000506707 TRAV13-1A0A0B4J241 112 aa3.74□□□□□ -1.81
USP46-206ENST00000506707 GAGE12HA6NDE8 117 aa3.74□□□□□ -1.81
USP46-206ENST00000506707 C1orf196B1AJZ1 125 aa3.74□□□□□ -1.81
USP46-206ENST00000506707 USP17L23D6RBM5 183 aa3.74□□□□□ -1.81
USP46-206ENST00000506707 CCL25O15444 150 aa3.74□□□□□ -1.81
USP46-206ENST00000506707 G0S2P27469 103 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms