RNA–Protein interactions for RNA: ENST00000506691.1

SNCA-210, Transcript of synuclein alpha, humanhuman

TSL 5

Gene SNCA, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-210ENST00000506691 NPSP0C0P6 89 aa7.31□□□□□ -1.24
SNCA-210ENST00000506691 IGHV3-30-3P0DP02 117 aa7.31□□□□□ -1.24
SNCA-210ENST00000506691 IGHV3-30-5P0DP03 117 aa7.31□□□□□ -1.24
SNCA-210ENST00000506691 FGF6P10767 208 aa7.31□□□□□ -1.24
SNCA-210ENST00000506691 MPV17L2Q567V2 206 aa7.31□□□□□ -1.24
SNCA-210ENST00000506691 DGAT2L7PQ6IED9 249 aa7.31□□□□□ -1.24
SNCA-210ENST00000506691 FA2HQ7L5A8 372 aa7.31□□□□□ -1.24
SNCA-210ENST00000506691 TM2D2Q9BX73 214 aa7.31□□□□□ -1.24
SNCA-210ENST00000506691 PYGO1Q9Y3Y4 419 aa7.31□□□□□ -1.24
SNCA-210ENST00000506691 TRAV8-4A0A0B4J246 113 aa7.3□□□□□ -1.24
SNCA-210ENST00000506691 EPM2AB3EWF7 344 aa7.3□□□□□ -1.24
SNCA-210ENST00000506691 CCL25O15444 150 aa7.3□□□□□ -1.24
SNCA-210ENST00000506691 SCO1O75880 301 aa7.3□□□□□ -1.24
SNCA-210ENST00000506691 ANGP03950 147 aaKnown RBP7.3□□□□□ -1.24
SNCA-210ENST00000506691 TRGC2P03986 189 aa7.3□□□□□ -1.24
SNCA-210ENST00000506691 LINC00614P0C842 121 aa7.3□□□□□ -1.24
SNCA-210ENST00000506691 RNASEKQ6P5S7 137 aaKnown RBP7.3□□□□□ -1.24
SNCA-210ENST00000506691 OR5A1Q8NGJ0 315 aa7.3□□□□□ -1.24
SNCA-210ENST00000506691 C18orf32Q8TCD1 76 aa7.3□□□□□ -1.24
SNCA-210ENST00000506691 SPANXA1Q9NS26 97 aa7.3□□□□□ -1.24
SNCA-210ENST00000506691 AP5S1Q9NUS5 200 aa7.3□□□□□ -1.24
SNCA-210ENST00000506691 PRR34Q9NV39 138 aa7.3□□□□□ -1.24
SNCA-210ENST00000506691 KLK12Q9UKR0 248 aa7.3□□□□□ -1.24
SNCA-210ENST00000506691 CYSLTR1Q9Y271 337 aa7.3□□□□□ -1.24
SNCA-210ENST00000506691 CRPP02741 224 aa7.29□□□□□ -1.24
SNCA-210ENST00000506691 MIAQ16674 131 aa7.29□□□□□ -1.24
SNCA-210ENST00000506691 PAPPA-AS1Q5QFB9 102 aa7.29□□□□□ -1.24
SNCA-210ENST00000506691 CDPF1Q6NVV7 123 aa7.29□□□□□ -1.24
SNCA-210ENST00000506691 SPATA12Q7Z6I5 190 aa7.29□□□□□ -1.24
SNCA-210ENST00000506691 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.28□□□□□ -1.24
SNCA-210ENST00000506691 IGKV2-29A2NJV5 120 aaPredicted RBP7.28□□□□□ -1.24
SNCA-210ENST00000506691 MRPS36P82909 103 aaKnown RBP7.28□□□□□ -1.24
SNCA-210ENST00000506691 ZNF664Q8N3J9 261 aa7.28□□□□□ -1.24
SNCA-210ENST00000506691 Q8N976 141 aa7.28□□□□□ -1.24
SNCA-210ENST00000506691 DEFB104AQ8WTQ1 72 aa7.28□□□□□ -1.24
SNCA-210ENST00000506691 CHCHD1Q96BP2 118 aaKnown RBP7.28□□□□□ -1.24
SNCA-210ENST00000506691 CDC42SE2Q9NRR3 84 aa7.28□□□□□ -1.24
SNCA-210ENST00000506691 PGPEP1Q9NXJ5 209 aa7.28□□□□□ -1.24
SNCA-210ENST00000506691 UBE2D4Q9Y2X8 147 aa7.28□□□□□ -1.24
SNCA-210ENST00000506691 IGLV4-60A0A075B6I1 120 aa7.27□□□□□ -1.25
SNCA-210ENST00000506691 REG3AQ06141 175 aa7.27□□□□□ -1.25
SNCA-210ENST00000506691 C2orf66Q6UXQ4 117 aa7.27□□□□□ -1.25
SNCA-210ENST00000506691 LINC00269Q8N2A0 174 aa7.27□□□□□ -1.25
SNCA-210ENST00000506691 UBE2WQ96B02 151 aa7.27□□□□□ -1.25
SNCA-210ENST00000506691 KRTAP1-5Q9BYS1 174 aa7.27□□□□□ -1.25
SNCA-210ENST00000506691 ENHOQ6UWT2 76 aa7.26□□□□□ -1.25
SNCA-210ENST00000506691 BAGE3Q86Y29 109 aa7.26□□□□□ -1.25
SNCA-210ENST00000506691 TOMM6Q96B49 74 aa7.26□□□□□ -1.25
SNCA-210ENST00000506691 TMEM141Q96I45 108 aa7.26□□□□□ -1.25
SNCA-210ENST00000506691 TIMM17AQ99595 171 aa7.26□□□□□ -1.25
SNCA-210ENST00000506691 C1orf43Q9BWL3 253 aa7.26□□□□□ -1.25
SNCA-210ENST00000506691 INAFM2P0DMQ5 153 aa7.25□□□□□ -1.25
SNCA-210ENST00000506691 Q6ZN92 141 aa7.25□□□□□ -1.25
SNCA-210ENST00000506691 ERASQ7Z444 233 aa7.25□□□□□ -1.25
SNCA-210ENST00000506691 Q8N3U1 123 aa7.25□□□□□ -1.25
SNCA-210ENST00000506691 IGIPA6NJ69 53 aa7.24□□□□□ -1.25
SNCA-210ENST00000506691 C1orf196B1AJZ1 125 aa7.24□□□□□ -1.25
SNCA-210ENST00000506691 PSCAO43653 123 aa7.24□□□□□ -1.25
SNCA-210ENST00000506691 RPL39P62891 51 aaKnown RBP7.24□□□□□ -1.25
SNCA-210ENST00000506691 SS18Q15532 418 aa7.24□□□□□ -1.25
SNCA-210ENST00000506691 SCGB3A1Q96QR1 104 aa7.24□□□□□ -1.25
SNCA-210ENST00000506691 VCX2Q9H322 139 aa7.24□□□□□ -1.25
SNCA-210ENST00000506691 IGKV2D-24A0A075B6R9 120 aa7.23□□□□□ -1.25
SNCA-210ENST00000506691 EREGO14944 169 aa7.23□□□□□ -1.25
SNCA-210ENST00000506691 HBDP02042 147 aa7.23□□□□□ -1.25
SNCA-210ENST00000506691 KRTAP10-2P60368 255 aa7.23□□□□□ -1.25
SNCA-210ENST00000506691 TEX43Q6ZNM6 134 aa7.23□□□□□ -1.25
SNCA-210ENST00000506691 Q6ZRN7 208 aaPredicted RBP7.23□□□□□ -1.25
SNCA-210ENST00000506691 Q9HAA7 133 aa7.23□□□□□ -1.25
SNCA-210ENST00000506691 LINC00959A0A1B0GUT2 108 aa7.22□□□□□ -1.25
SNCA-210ENST00000506691 HSBP1O75506 76 aa7.22□□□□□ -1.25
SNCA-210ENST00000506691 ATP5LO75964 103 aa7.22□□□□□ -1.25
SNCA-210ENST00000506691 SEC11AP67812 179 aa7.22□□□□□ -1.25
SNCA-210ENST00000506691 URB1-AS1Q96HZ7 61 aa7.22□□□□□ -1.25
SNCA-210ENST00000506691 C2orf88Q9BSF0 95 aa7.22□□□□□ -1.25
SNCA-210ENST00000506691 IGLV4-3A0A075B6K6 122 aa7.21□□□□□ -1.26
SNCA-210ENST00000506691 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.21□□□□□ -1.26
SNCA-210ENST00000506691 C14orf177Q52M58 125 aa7.21□□□□□ -1.26
SNCA-210ENST00000506691 AMELXQ99217 191 aa7.21□□□□□ -1.26
SNCA-210ENST00000506691 HIST1H2BKO60814 126 aa7.2□□□□□ -1.26
SNCA-210ENST00000506691 HIST1H2BJP06899 126 aa7.2□□□□□ -1.26
SNCA-210ENST00000506691 HIST1H2BOP23527 126 aa7.2□□□□□ -1.26
SNCA-210ENST00000506691 HIST1H2BBP33778 126 aa7.2□□□□□ -1.26
SNCA-210ENST00000506691 HIST1H2BDP58876 126 aa7.2□□□□□ -1.26
SNCA-210ENST00000506691 HIST1H2BCP62807 126 aa7.2□□□□□ -1.26
SNCA-210ENST00000506691 HIST2H2BEQ16778 126 aa7.2□□□□□ -1.26
SNCA-210ENST00000506691 PDZD11Q5EBL8 140 aa7.2□□□□□ -1.26
SNCA-210ENST00000506691 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.2□□□□□ -1.26
SNCA-210ENST00000506691 CFAP161Q6P656 301 aa7.2□□□□□ -1.26
SNCA-210ENST00000506691 CD164L2Q6UWJ8 174 aa7.2□□□□□ -1.26
SNCA-210ENST00000506691 Q6ZUT4 128 aa7.2□□□□□ -1.26
SNCA-210ENST00000506691 HIST1H2BHQ93079 126 aa7.2□□□□□ -1.26
SNCA-210ENST00000506691 HIST1H2BNQ99877 126 aa7.2□□□□□ -1.26
SNCA-210ENST00000506691 HIST1H2BMQ99879 126 aa7.2□□□□□ -1.26
SNCA-210ENST00000506691 IFITM10A6NMD0 228 aa7.19□□□□□ -1.26
SNCA-210ENST00000506691 XGP55808 180 aa7.19□□□□□ -1.26
SNCA-210ENST00000506691 COA6Q5JTJ3 125 aaKnown RBP7.19□□□□□ -1.26
SNCA-210ENST00000506691 Q5VSD8 79 aa7.19□□□□□ -1.26
SNCA-210ENST00000506691 CLPSL2Q6UWE3 100 aa7.19□□□□□ -1.26
SNCA-210ENST00000506691 CHCHD10Q8WYQ3 142 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms