RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 C5orf42Q9H799 3197 aa0.2□□□□□ -2.38
GYPB-207ENST00000506679 CUBNO60494 3623 aa0.2□□□□□ -2.38
GYPB-207ENST00000506679 VPS13CQ709C8 3753 aa0.2□□□□□ -2.38
GYPB-207ENST00000506679 PATJQ8NI35 1801 aa0.2□□□□□ -2.38
GYPB-207ENST00000506679 DOCK2Q92608 1830 aa0.2□□□□□ -2.38
GYPB-207ENST00000506679 MTORP42345 2549 aa0.2□□□□□ -2.38
GYPB-207ENST00000506679 MYO7AQ13402 2215 aa0.2□□□□□ -2.38
GYPB-207ENST00000506679 CLPSL1A2RUU4 121 aa0.2□□□□□ -2.38
GYPB-207ENST00000506679 FAM25AB3EWG3 89 aa0.2□□□□□ -2.38
GYPB-207ENST00000506679 FAM25CB3EWG5 89 aa0.2□□□□□ -2.38
GYPB-207ENST00000506679 FAM25GB3EWG6 89 aa0.2□□□□□ -2.38
GYPB-207ENST00000506679 K7EP13 123 aa0.2□□□□□ -2.38
GYPB-207ENST00000506679 PIN1P1O15428 100 aa0.2□□□□□ -2.38
GYPB-207ENST00000506679 SIX6O95475 246 aa0.2□□□□□ -2.38
GYPB-207ENST00000506679 NMBP08949 121 aa0.2□□□□□ -2.38
GYPB-207ENST00000506679 BTG2P78543 158 aa0.2□□□□□ -2.38
GYPB-207ENST00000506679 S100A7L2Q5SY68 101 aa0.2□□□□□ -2.38
GYPB-207ENST00000506679 FAM107BQ9H098 131 aa0.2□□□□□ -2.38
GYPB-207ENST00000506679 AGPAT4-IT1Q9H0P7 198 aa0.2□□□□□ -2.38
GYPB-207ENST00000506679 NAA60Q9H7X0 242 aa0.2□□□□□ -2.38
GYPB-207ENST00000506679 SERP1Q9Y6X1 66 aa0.2□□□□□ -2.38
GYPB-207ENST00000506679 PIEZO2Q9H5I5 2752 aa0.2□□□□□ -2.38
GYPB-207ENST00000506679 CELSR2Q9HCU4 2923 aa0.2□□□□□ -2.38
GYPB-207ENST00000506679 MUC3AQ02505 3323 aa0.2□□□□□ -2.38
GYPB-207ENST00000506679 CENPFP49454 3210 aa0.19□□□□□ -2.38
GYPB-207ENST00000506679 HSPG2P98160 4391 aa0.19□□□□□ -2.38
GYPB-207ENST00000506679 PHLPP1O60346 1717 aa0.19□□□□□ -2.38
GYPB-207ENST00000506679 PRDM2Q13029 1718 aa0.19□□□□□ -2.38
GYPB-207ENST00000506679 IFT172Q9UG01 1749 aa0.19□□□□□ -2.38
GYPB-207ENST00000506679 CEP290O15078 2479 aa0.19□□□□□ -2.38
GYPB-207ENST00000506679 SPAARA0A1B0GVQ0 90 aa0.19□□□□□ -2.38
GYPB-207ENST00000506679 HIST1H1DP16402 221 aaKnown RBP0.19□□□□□ -2.38
GYPB-207ENST00000506679 FGF7P21781 194 aa0.19□□□□□ -2.38
GYPB-207ENST00000506679 Q5BKY6 102 aa0.19□□□□□ -2.38
GYPB-207ENST00000506679 Q6AWC8 147 aa0.19□□□□□ -2.38
GYPB-207ENST00000506679 BAGE3Q86Y29 109 aa0.19□□□□□ -2.38
GYPB-207ENST00000506679 AQP10Q96PS8 301 aa0.19□□□□□ -2.38
GYPB-207ENST00000506679 LINC00312Q9Y6C7 94 aa0.19□□□□□ -2.38
GYPB-207ENST00000506679 MAP1AP78559 2803 aaPredicted RBP0.19□□□□□ -2.38
GYPB-207ENST00000506679 CEP250Q9BV73 2442 aa0.19□□□□□ -2.38
GYPB-207ENST00000506679 CADP27708 2225 aa0.19□□□□□ -2.38
GYPB-207ENST00000506679 SVEP1Q4LDE5 3571 aa0.19□□□□□ -2.38
GYPB-207ENST00000506679 MYO15AQ9UKN7 3530 aa0.19□□□□□ -2.38
GYPB-207ENST00000506679 CASKIN1Q8WXD9 1431 aa0.19□□□□□ -2.38
GYPB-207ENST00000506679 CSMD2Q7Z408 3487 aa0.19□□□□□ -2.38
GYPB-207ENST00000506679 SETBP1Q9Y6X0 1596 aa0.19□□□□□ -2.38
GYPB-207ENST00000506679 LRP1BQ9NZR2 4599 aa0.18□□□□□ -2.38
GYPB-207ENST00000506679 KDM5AP29375 1690 aaKnown RBP0.18□□□□□ -2.38
GYPB-207ENST00000506679 GOLGA3Q08378 1498 aa0.18□□□□□ -2.38
GYPB-207ENST00000506679 BCL9LQ86UU0 1499 aa0.18□□□□□ -2.38
GYPB-207ENST00000506679 WDFY3Q8IZQ1 3526 aa0.18□□□□□ -2.38
GYPB-207ENST00000506679 TRAV13-2A0A0B4J235 113 aa0.18□□□□□ -2.38
GYPB-207ENST00000506679 TRAV1-2A0A0B4J238 106 aa0.18□□□□□ -2.38
GYPB-207ENST00000506679 EFCAB10A6NFE3 127 aa0.18□□□□□ -2.38
GYPB-207ENST00000506679 GNG7O60262 68 aa0.18□□□□□ -2.38
GYPB-207ENST00000506679 SPINK1P00995 79 aa0.18□□□□□ -2.38
GYPB-207ENST00000506679 SARNPP82979 210 aaKnown RBP0.18□□□□□ -2.38
GYPB-207ENST00000506679 MEIG1Q5JSS6 88 aa0.18□□□□□ -2.38
GYPB-207ENST00000506679 UBE2DNLQ8IWF7 75 aa0.18□□□□□ -2.38
GYPB-207ENST00000506679 R4GMQ9 66 aa0.18□□□□□ -2.38
GYPB-207ENST00000506679 MYCBP2O75592 4640 aa0.18□□□□□ -2.38
GYPB-207ENST00000506679 LRP2P98164 4655 aa0.18□□□□□ -2.38
GYPB-207ENST00000506679 DNAH14Q0VDD8 3507 aa0.18□□□□□ -2.38
GYPB-207ENST00000506679 DOCK1Q14185 1865 aa0.18□□□□□ -2.38
GYPB-207ENST00000506679 WNK3Q9BYP7 1800 aa0.17□□□□□ -2.38
GYPB-207ENST00000506679 ITPR2Q14571 2701 aa0.17□□□□□ -2.38
GYPB-207ENST00000506679 HCG22E2RYF7 251 aa0.17□□□□□ -2.38
GYPB-207ENST00000506679 LAMA5O15230 3695 aa0.17□□□□□ -2.38
GYPB-207ENST00000506679 Q56UQ5 140 aa0.17□□□□□ -2.38
GYPB-207ENST00000506679 Q8N8P6 123 aa0.17□□□□□ -2.38
GYPB-207ENST00000506679 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.17□□□□□ -2.38
GYPB-207ENST00000506679 FAM213BQ8TBF2 198 aa0.17□□□□□ -2.38
GYPB-207ENST00000506679 PPP3R2Q96LZ3 170 aa0.17□□□□□ -2.38
GYPB-207ENST00000506679 ZMYM4Q5VZL5 1548 aa0.17□□□□□ -2.38
GYPB-207ENST00000506679 NIPBLQ6KC79 2804 aaeCLIP0.17□□□□□ -2.38
GYPB-207ENST00000506679 TPRP12270 2363 aaKnown RBP0.17□□□□□ -2.38
GYPB-207ENST00000506679 SPENQ96T58 3664 aaKnown RBP0.16□□□□□ -2.38
GYPB-207ENST00000506679 ARAP2Q8WZ64 1704 aa0.16□□□□□ -2.38
GYPB-207ENST00000506679 LAMA1P25391 3075 aa0.16□□□□□ -2.38
GYPB-207ENST00000506679 ZNF609O15014 1411 aa0.16□□□□□ -2.38
GYPB-207ENST00000506679 PPIP5K1Q6PFW1 1433 aa0.16□□□□□ -2.38
GYPB-207ENST00000506679 A0A0D9SFI3 127 aa0.16□□□□□ -2.38
GYPB-207ENST00000506679 G3V318 75 aa0.16□□□□□ -2.38
GYPB-207ENST00000506679 PPP1R17O96001 155 aa0.16□□□□□ -2.38
GYPB-207ENST00000506679 SPINK8P0C7L1 97 aa0.16□□□□□ -2.38
GYPB-207ENST00000506679 CCL18P55774 89 aa0.16□□□□□ -2.38
GYPB-207ENST00000506679 RBM3P98179 157 aaKnown RBP0.16□□□□□ -2.38
GYPB-207ENST00000506679 C10orf128Q5T292 105 aa0.16□□□□□ -2.38
GYPB-207ENST00000506679 SMIM4Q8WVI0 70 aa0.16□□□□□ -2.38
GYPB-207ENST00000506679 LSM10Q969L4 123 aaKnown RBP0.16□□□□□ -2.38
GYPB-207ENST00000506679 LENEPQ9Y5L5 61 aa0.16□□□□□ -2.38
GYPB-207ENST00000506679 LRBAP50851 2863 aa0.16□□□□□ -2.38
GYPB-207ENST00000506679 TCHHQ07283 1943 aa0.16□□□□□ -2.38
GYPB-207ENST00000506679 LOC400499M0QZD8 3231 aa0.16□□□□□ -2.38
GYPB-207ENST00000506679 KDM3BQ7LBC6 1761 aa0.16□□□□□ -2.38
GYPB-207ENST00000506679 MBD5Q9P267 1494 aa0.16□□□□□ -2.38
GYPB-207ENST00000506679 SYNE1Q8NF91 8797 aaKnown RBP0.16□□□□□ -2.38
GYPB-207ENST00000506679 NALCNQ8IZF0 1738 aa0.16□□□□□ -2.38
GYPB-207ENST00000506679 HECTD4Q9Y4D8 3996 aa0.15□□□□□ -2.38
GYPB-207ENST00000506679 PLXNB2O15031 1838 aa0.15□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms