RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 LAMTOR2Q9Y2Q5 125 aa4.09□□□□□ -1.76
SCLT1-207ENST00000506233 MRPS16Q9Y3D3 137 aaKnown RBP4.09□□□□□ -1.76
SCLT1-207ENST00000506233 SETD2Q9BYW2 2564 aaPredicted RBP4.09□□□□□ -1.76
SCLT1-207ENST00000506233 RYR3Q15413 4870 aa4.09□□□□□ -1.76
SCLT1-207ENST00000506233 TRAV21A0A0B4J279 112 aa4.08□□□□□ -1.76
SCLT1-207ENST00000506233 E9PLD3 99 aa4.08□□□□□ -1.76
SCLT1-207ENST00000506233 DUSP14O95147 198 aaKnown RBP4.08□□□□□ -1.76
SCLT1-207ENST00000506233 LINC01547P58512 204 aaPredicted RBP4.08□□□□□ -1.76
SCLT1-207ENST00000506233 BVES-AS1Q5T3Y7 98 aa4.08□□□□□ -1.76
SCLT1-207ENST00000506233 MRPL52Q86TS9 123 aaKnown RBP4.08□□□□□ -1.76
SCLT1-207ENST00000506233 OR5A1Q8NGJ0 315 aa4.08□□□□□ -1.76
SCLT1-207ENST00000506233 MRAP2Q96G30 205 aa4.08□□□□□ -1.76
SCLT1-207ENST00000506233 SORL1Q92673 2214 aa4.08□□□□□ -1.76
SCLT1-207ENST00000506233 NDUFV3P56181 108 aaKnown RBP4.08□□□□□ -1.76
SCLT1-207ENST00000506233 LEPROTL1O95214 131 aa4.08□□□□□ -1.76
SCLT1-207ENST00000506233 HNRNPA3P51991 378 aaKnown RBP4.08□□□□□ -1.76
SCLT1-207ENST00000506233 CD164Q04900 197 aa4.08□□□□□ -1.76
SCLT1-207ENST00000506233 KLHL30-AS1Q8NEE0 82 aa4.08□□□□□ -1.76
SCLT1-207ENST00000506233 TRBV7-3A0A075B6L6 115 aa4.07□□□□□ -1.76
SCLT1-207ENST00000506233 K7EMI3 77 aa4.07□□□□□ -1.76
SCLT1-207ENST00000506233 C20orf78Q9BR46 151 aa4.07□□□□□ -1.76
SCLT1-207ENST00000506233 TMEM208Q9BTX3 173 aa4.07□□□□□ -1.76
SCLT1-207ENST00000506233 PKHD1L1Q86WI1 4243 aa4.07□□□□□ -1.76
SCLT1-207ENST00000506233 TRAV12-1A0A0B4J245 112 aa4.07□□□□□ -1.76
SCLT1-207ENST00000506233 RPL37AP8A6NKH3 93 aa4.07□□□□□ -1.76
SCLT1-207ENST00000506233 DLEU1O43261 78 aa4.07□□□□□ -1.76
SCLT1-207ENST00000506233 DEFB131AP59861 70 aa4.07□□□□□ -1.76
SCLT1-207ENST00000506233 TENM2Q9NT68 2774 aa4.07□□□□□ -1.76
SCLT1-207ENST00000506233 CSN1S1P47710 185 aa4.07□□□□□ -1.76
SCLT1-207ENST00000506233 CACNG7P62955 275 aa4.07□□□□□ -1.76
SCLT1-207ENST00000506233 ATRQ13535 2644 aa4.06□□□□□ -1.76
SCLT1-207ENST00000506233 CREBBPQ92793 2442 aa4.06□□□□□ -1.76
SCLT1-207ENST00000506233 LYRM9A8MSI8 78 aa4.06□□□□□ -1.76
SCLT1-207ENST00000506233 HBDP02042 147 aa4.06□□□□□ -1.76
SCLT1-207ENST00000506233 ZNF876PQ49A33 203 aa4.06□□□□□ -1.76
SCLT1-207ENST00000506233 MRPL35Q9NZE8 188 aaKnown RBP4.06□□□□□ -1.76
SCLT1-207ENST00000506233 A0A087WX48 190 aa4.06□□□□□ -1.76
SCLT1-207ENST00000506233 IGKV3-20P01619 116 aa4.06□□□□□ -1.76
SCLT1-207ENST00000506233 SMIM17P0DL12 118 aa4.06□□□□□ -1.76
SCLT1-207ENST00000506233 PLEKHB2Q96CS7 222 aa4.06□□□□□ -1.76
SCLT1-207ENST00000506233 STAB1Q9NY15 2570 aa4.06□□□□□ -1.76
SCLT1-207ENST00000506233 FAM240AA0A1B0GVK7 77 aa4.06□□□□□ -1.76
SCLT1-207ENST00000506233 CCL25O15444 150 aa4.06□□□□□ -1.76
SCLT1-207ENST00000506233 CKS2P33552 79 aa4.06□□□□□ -1.76
SCLT1-207ENST00000506233 CEMP1Q6PRD7 247 aaPredicted RBP4.06□□□□□ -1.76
SCLT1-207ENST00000506233 DPH3P1Q9H4G8 78 aa4.06□□□□□ -1.76
SCLT1-207ENST00000506233 ST20Q9HBF5 79 aa4.06□□□□□ -1.76
SCLT1-207ENST00000506233 PPBPP02775 128 aa4.05□□□□□ -1.76
SCLT1-207ENST00000506233 NFE4Q86UQ8 179 aa4.05□□□□□ -1.76
SCLT1-207ENST00000506233 OR10J6PQ8NGY7 276 aa4.05□□□□□ -1.76
SCLT1-207ENST00000506233 IFI27L1Q96BM0 104 aa4.05□□□□□ -1.76
SCLT1-207ENST00000506233 UBE2D4Q9Y2X8 147 aa4.05□□□□□ -1.76
SCLT1-207ENST00000506233 RYR2Q92736 4967 aa4.05□□□□□ -1.76
SCLT1-207ENST00000506233 COX6A2Q02221 97 aa4.05□□□□□ -1.76
SCLT1-207ENST00000506233 MPV17L2Q567V2 206 aa4.05□□□□□ -1.76
SCLT1-207ENST00000506233 IGLV4-3A0A075B6K6 122 aa4.05□□□□□ -1.76
SCLT1-207ENST00000506233 WFDC9Q8NEX5 89 aa4.05□□□□□ -1.76
SCLT1-207ENST00000506233 CST9LQ9H4G1 147 aa4.04□□□□□ -1.76
SCLT1-207ENST00000506233 C11orf86A6NJI1 115 aa4.04□□□□□ -1.76
SCLT1-207ENST00000506233 CRLF1O75462 422 aa4.04□□□□□ -1.76
SCLT1-207ENST00000506233 ASIPP42127 132 aa4.04□□□□□ -1.76
SCLT1-207ENST00000506233 C2CD3Q4AC94 2353 aa4.04□□□□□ -1.76
SCLT1-207ENST00000506233 Q6ZTI0 123 aa4.03□□□□□ -1.76
SCLT1-207ENST00000506233 VAMP8Q9BV40 100 aa4.03□□□□□ -1.76
SCLT1-207ENST00000506233 TRAV8-6A0A0B4J262 113 aa4.03□□□□□ -1.76
SCLT1-207ENST00000506233 C20orf202A1L168 122 aa4.03□□□□□ -1.76
SCLT1-207ENST00000506233 IGHV3-53P01767 116 aa4.03□□□□□ -1.76
SCLT1-207ENST00000506233 FHL2Q14192 279 aa4.03□□□□□ -1.76
SCLT1-207ENST00000506233 NXT2Q9NPJ8 142 aaKnown RBP4.03□□□□□ -1.76
SCLT1-207ENST00000506233 FXYD2P54710 66 aa4.03□□□□□ -1.76
SCLT1-207ENST00000506233 DAZ2Q13117 558 aaKnown RBP4.03□□□□□ -1.76
SCLT1-207ENST00000506233 C22orf24Q9Y442 160 aa4.03□□□□□ -1.76
SCLT1-207ENST00000506233 MRPL55Q7Z7F7 128 aaKnown RBP4.02□□□□□ -1.77
SCLT1-207ENST00000506233 Q8N3U1 123 aa4.02□□□□□ -1.77
SCLT1-207ENST00000506233 C10orf126Q8N4M7 172 aa4.02□□□□□ -1.77
SCLT1-207ENST00000506233 C20orf203Q8NBC4 194 aa4.02□□□□□ -1.77
SCLT1-207ENST00000506233 UQCR10Q9UDW1 63 aa4.02□□□□□ -1.77
SCLT1-207ENST00000506233 PRO0461Q9UI25 63 aa4.02□□□□□ -1.77
SCLT1-207ENST00000506233 TRBV25-1A0A075B6N4 114 aa4.02□□□□□ -1.77
SCLT1-207ENST00000506233 RPL18AQ02543 176 aaKnown RBP4.02□□□□□ -1.77
SCLT1-207ENST00000506233 KRTAP24-1Q3LI83 254 aa4.02□□□□□ -1.77
SCLT1-207ENST00000506233 C2orf66Q6UXQ4 117 aa4.02□□□□□ -1.77
SCLT1-207ENST00000506233 Q8NAQ8 132 aa4.02□□□□□ -1.77
SCLT1-207ENST00000506233 MAP1LC3AQ9H492 121 aa4.02□□□□□ -1.77
SCLT1-207ENST00000506233 NOTCH3Q9UM47 2321 aa4.02□□□□□ -1.77
SCLT1-207ENST00000506233 MRPS36P82909 103 aaKnown RBP4.02□□□□□ -1.77
SCLT1-207ENST00000506233 NDUFA11Q86Y39 141 aa4.02□□□□□ -1.77
SCLT1-207ENST00000506233 MRPL16Q9NX20 251 aaKnown RBP4.02□□□□□ -1.77
SCLT1-207ENST00000506233 FAT3Q8TDW7 4589 aa4.02□□□□□ -1.77
SCLT1-207ENST00000506233 TMEM223A0PJW6 202 aa4.01□□□□□ -1.77
SCLT1-207ENST00000506233 SDHAF1A6NFY7 115 aa4.01□□□□□ -1.77
SCLT1-207ENST00000506233 TCTAP57738 103 aa4.01□□□□□ -1.77
SCLT1-207ENST00000506233 DEFA6Q01524 100 aa4.01□□□□□ -1.77
SCLT1-207ENST00000506233 EGFEM1PQ0D2K5 195 aa4.01□□□□□ -1.77
SCLT1-207ENST00000506233 Q8NDZ9 215 aa4.01□□□□□ -1.77
SCLT1-207ENST00000506233 UBE2D3P61077 147 aa4.01□□□□□ -1.77
SCLT1-207ENST00000506233 UBE2D2P62837 147 aa4.01□□□□□ -1.77
SCLT1-207ENST00000506233 ADAMTSL4-AS1Q5T5F5 129 aa4.01□□□□□ -1.77
SCLT1-207ENST00000506233 SLC25A29Q8N8R3 303 aa4.01□□□□□ -1.77
SCLT1-207ENST00000506233 VSIG2Q96IQ7 327 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms