RNA–Protein interactions for RNA: ENST00000505108.1

TRAPPC13-207, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-207ENST00000505108 SPANXN1Q5VSR9 72 aa2.97□□□□□ -1.93
TRAPPC13-207ENST00000505108 MORN3Q6PF18 240 aaPredicted RBP2.97□□□□□ -1.93
TRAPPC13-207ENST00000505108 BAALCQ8WXS3 180 aa2.97□□□□□ -1.93
TRAPPC13-207ENST00000505108 RAB37Q96AX2 223 aa2.97□□□□□ -1.93
TRAPPC13-207ENST00000505108 TOMM6Q96B49 74 aa2.97□□□□□ -1.93
TRAPPC13-207ENST00000505108 USMG5Q96IX5 58 aa2.97□□□□□ -1.93
TRAPPC13-207ENST00000505108 RHPN1-AS1Q9BWJ2 59 aa2.97□□□□□ -1.93
TRAPPC13-207ENST00000505108 DPH3P1Q9H4G8 78 aa2.97□□□□□ -1.93
TRAPPC13-207ENST00000505108 GEMIN7Q9H840 131 aaKnown RBP2.97□□□□□ -1.93
TRAPPC13-207ENST00000505108 AKAP13Q12802 2813 aa2.97□□□□□ -1.93
TRAPPC13-207ENST00000505108 BSNQ9UPA5 3926 aa2.96□□□□□ -1.94
TRAPPC13-207ENST00000505108 IGKV3-7A0A075B6H7 116 aa2.96□□□□□ -1.94
TRAPPC13-207ENST00000505108 SMIM26A0A096LP01 95 aa2.96□□□□□ -1.94
TRAPPC13-207ENST00000505108 A0A1W2PPM0 123 aa2.96□□□□□ -1.94
TRAPPC13-207ENST00000505108 A6NDN8 102 aa2.96□□□□□ -1.94
TRAPPC13-207ENST00000505108 MSMBP08118 114 aa2.96□□□□□ -1.94
TRAPPC13-207ENST00000505108 MGPP08493 103 aa2.96□□□□□ -1.94
TRAPPC13-207ENST00000505108 LGALS1P09382 135 aaKnown RBP2.96□□□□□ -1.94
TRAPPC13-207ENST00000505108 ZNF688P0C7X2 276 aa2.96□□□□□ -1.94
TRAPPC13-207ENST00000505108 COX6B1P14854 86 aa2.96□□□□□ -1.94
TRAPPC13-207ENST00000505108 PSMB8P28062 276 aa2.96□□□□□ -1.94
TRAPPC13-207ENST00000505108 RNASE4P34096 147 aaKnown RBP2.96□□□□□ -1.94
TRAPPC13-207ENST00000505108 POLR2KP53803 58 aaKnown RBP2.96□□□□□ -1.94
TRAPPC13-207ENST00000505108 RBMY1FQ15415 496 aaKnown RBP2.96□□□□□ -1.94
TRAPPC13-207ENST00000505108 MYOZ3Q8TDC0 251 aa2.96□□□□□ -1.94
TRAPPC13-207ENST00000505108 PLEKHB2Q96CS7 222 aa2.96□□□□□ -1.94
TRAPPC13-207ENST00000505108 CCL19Q99731 98 aa2.96□□□□□ -1.94
TRAPPC13-207ENST00000505108 C20orf78Q9BR46 151 aa2.96□□□□□ -1.94
TRAPPC13-207ENST00000505108 CFAP47Q6ZTR5 3102 aa2.96□□□□□ -1.94
TRAPPC13-207ENST00000505108 CNOT1A5YKK6 2376 aaKnown RBP2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 ACACAQ13085 2346 aa2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 IGIPA6NJ69 53 aa2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 C11orf86A6NJI1 115 aa2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 IGLL5B9A064 214 aa2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 LGALS9O00182 355 aa2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 SMIM13P0DJ93 91 aa2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 ATP5J2P56134 94 aa2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 TSPEAR-AS2P59090 65 aa2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 TAL2Q16559 108 aa2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 DEFB112Q30KQ8 113 aa2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 C12orf74Q32Q52 190 aa2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 PSMG4Q5JS54 123 aa2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 KPRPQ5T749 579 aaPredicted RBP2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 AMTNQ6UX39 209 aa2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 SMIM15Q7Z3B0 74 aa2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 OR5A1Q8NGJ0 315 aa2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 DEFB104AQ8WTQ1 72 aa2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 AP1S3Q96PC3 154 aa2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 ODF3Q96PU9 254 aa2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 SCGB3A1Q96QR1 104 aa2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 DAZ1Q9NQZ3 744 aaKnown RBP2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 PHLDA3Q9Y5J5 127 aa2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 SPCS1Q9Y6A9 102 aa2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 EP300Q09472 2414 aaPredicted RBP2.95□□□□□ -1.94
TRAPPC13-207ENST00000505108 MUC3AQ02505 3323 aa2.94□□□□□ -1.94
TRAPPC13-207ENST00000505108 ZFHX4Q86UP3 3567 aa2.94□□□□□ -1.94
TRAPPC13-207ENST00000505108 TRAV12-3A0A0B4J271 114 aa2.94□□□□□ -1.94
TRAPPC13-207ENST00000505108 A0A0J9YX75 114 aa2.94□□□□□ -1.94
TRAPPC13-207ENST00000505108 TRBV6-5A0A0K0K1A5 114 aa2.94□□□□□ -1.94
TRAPPC13-207ENST00000505108 MYMXA0A1B0GTQ4 84 aa2.94□□□□□ -1.94
TRAPPC13-207ENST00000505108 A8MTW9 85 aa2.94□□□□□ -1.94
TRAPPC13-207ENST00000505108 NDUFC2-KCTD14E9PQ53 114 aa2.94□□□□□ -1.94
TRAPPC13-207ENST00000505108 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.94□□□□□ -1.94
TRAPPC13-207ENST00000505108 P0DMU3 169 aa2.94□□□□□ -1.94
TRAPPC13-207ENST00000505108 FAM231AP0DMU4 169 aa2.94□□□□□ -1.94
TRAPPC13-207ENST00000505108 FAM231CP0DMU5 169 aa2.94□□□□□ -1.94
TRAPPC13-207ENST00000505108 PLNP26678 52 aa2.94□□□□□ -1.94
TRAPPC13-207ENST00000505108 RPL39P62891 51 aaKnown RBP2.94□□□□□ -1.94
TRAPPC13-207ENST00000505108 GTF2H5Q6ZYL4 71 aa2.94□□□□□ -1.94
TRAPPC13-207ENST00000505108 AMELXQ99217 191 aa2.94□□□□□ -1.94
TRAPPC13-207ENST00000505108 PRADC1Q9BSG0 188 aa2.94□□□□□ -1.94
TRAPPC13-207ENST00000505108 NHP2Q9NX24 153 aaKnown RBP2.94□□□□□ -1.94
TRAPPC13-207ENST00000505108 TRAV12-2A0A075B6T6 113 aa2.93□□□□□ -1.94
TRAPPC13-207ENST00000505108 B4DSR2 109 aa2.93□□□□□ -1.94
TRAPPC13-207ENST00000505108 M0QY20 66 aa2.93□□□□□ -1.94
TRAPPC13-207ENST00000505108 CD7P09564 240 aa2.93□□□□□ -1.94
TRAPPC13-207ENST00000505108 S100A4P26447 101 aaKnown RBP2.93□□□□□ -1.94
TRAPPC13-207ENST00000505108 UBE2D1P51668 147 aa2.93□□□□□ -1.94
TRAPPC13-207ENST00000505108 SPINK13Q1W4C9 94 aa2.93□□□□□ -1.94
TRAPPC13-207ENST00000505108 RRN3P1Q2M238 152 aa2.93□□□□□ -1.94
TRAPPC13-207ENST00000505108 ZNRF2Q8NHG8 242 aa2.93□□□□□ -1.94
TRAPPC13-207ENST00000505108 TP53TG1Q9Y2A0 90 aa2.93□□□□□ -1.94
TRAPPC13-207ENST00000505108 WNK2Q9Y3S1 2297 aa2.93□□□□□ -1.94
TRAPPC13-207ENST00000505108 A0A0J9YY99 117 aa2.92□□□□□ -1.94
TRAPPC13-207ENST00000505108 TRBV27A0A0K0K1C4 114 aa2.92□□□□□ -1.94
TRAPPC13-207ENST00000505108 SDHAF1A6NFY7 115 aa2.92□□□□□ -1.94
TRAPPC13-207ENST00000505108 OR11H12B2RN74 326 aa2.92□□□□□ -1.94
TRAPPC13-207ENST00000505108 OXTP01178 125 aa2.92□□□□□ -1.94
TRAPPC13-207ENST00000505108 FABP2P12104 132 aa2.92□□□□□ -1.94
TRAPPC13-207ENST00000505108 EMP1P54849 157 aa2.92□□□□□ -1.94
TRAPPC13-207ENST00000505108 WFDC2Q14508 124 aa2.92□□□□□ -1.94
TRAPPC13-207ENST00000505108 PMVKQ15126 192 aa2.92□□□□□ -1.94
TRAPPC13-207ENST00000505108 FOXI2Q6ZQN5 318 aa2.92□□□□□ -1.94
TRAPPC13-207ENST00000505108 MIR7-3HGQ8N6C7 128 aa2.92□□□□□ -1.94
TRAPPC13-207ENST00000505108 OR11H1Q8NG94 326 aa2.92□□□□□ -1.94
TRAPPC13-207ENST00000505108 OR11H2Q8NH07 326 aa2.92□□□□□ -1.94
TRAPPC13-207ENST00000505108 TMEM243Q9BU79 118 aa2.92□□□□□ -1.94
TRAPPC13-207ENST00000505108 SPANXB1Q9NS25 103 aaPredicted RBP2.92□□□□□ -1.94
TRAPPC13-207ENST00000505108 CYSLTR1Q9Y271 337 aa2.92□□□□□ -1.94
TRAPPC13-207ENST00000505108 ZZEF1O43149 2961 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms