RNA–Protein interactions for RNA: ENST00000504263.1

PCAT4-201, prostate cancer associated transcript 4, humanhuman

TSL 1 (best) BASIC

Gene PCAT4, Length 2,091 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT4-201ENST00000504263 VPS13CQ709C8 3753 aa2.6□□□□□ -1.99
PCAT4-201ENST00000504263 NACAE9PAV3 2078 aa2.6□□□□□ -1.99
PCAT4-201ENST00000504263 ITPR3Q14573 2671 aa2.6□□□□□ -1.99
PCAT4-201ENST00000504263 IGKV3D-20A0A0C4DH25 116 aa2.6□□□□□ -1.99
PCAT4-201ENST00000504263 IGHV1-18A0A0C4DH31 117 aa2.6□□□□□ -1.99
PCAT4-201ENST00000504263 I3L2K1 104 aa2.6□□□□□ -1.99
PCAT4-201ENST00000504263 NXPH4O95158 308 aa2.6□□□□□ -1.99
PCAT4-201ENST00000504263 POLR2KP53803 58 aaKnown RBP2.6□□□□□ -1.99
PCAT4-201ENST00000504263 MRGPRG-AS1Q2M3A8 158 aa2.6□□□□□ -1.99
PCAT4-201ENST00000504263 C3orf36Q3SXR2 165 aa2.6□□□□□ -1.99
PCAT4-201ENST00000504263 FAM223AQ8IWN6 122 aa2.6□□□□□ -1.99
PCAT4-201ENST00000504263 WFDC11Q8NEX6 87 aa2.6□□□□□ -1.99
PCAT4-201ENST00000504263 NUP37Q8NFH4 326 aa2.6□□□□□ -1.99
PCAT4-201ENST00000504263 IL17DQ8TAD2 202 aa2.6□□□□□ -1.99
PCAT4-201ENST00000504263 CCL13Q99616 98 aa2.6□□□□□ -1.99
PCAT4-201ENST00000504263 DEFB127Q9H1M4 99 aa2.6□□□□□ -1.99
PCAT4-201ENST00000504263 AKAP9Q99996 3911 aa2.6□□□□□ -1.99
PCAT4-201ENST00000504263 NAV3Q8IVL0 2385 aa2.6□□□□□ -1.99
PCAT4-201ENST00000504263 MTORP42345 2549 aa2.59□□□□□ -1.99
PCAT4-201ENST00000504263 FREM1Q5H8C1 2179 aa2.59□□□□□ -1.99
PCAT4-201ENST00000504263 HIVEP1P15822 2718 aa2.59□□□□□ -1.99
PCAT4-201ENST00000504263 TRBV6-5A0A0K0K1A5 114 aa2.59□□□□□ -1.99
PCAT4-201ENST00000504263 DNAL4O96015 105 aa2.59□□□□□ -1.99
PCAT4-201ENST00000504263 LHBP01229 141 aa2.59□□□□□ -1.99
PCAT4-201ENST00000504263 ADORA2A-AS1P86434 159 aa2.59□□□□□ -1.99
PCAT4-201ENST00000504263 RUSC1-AS1Q66K80 236 aa2.59□□□□□ -1.99
PCAT4-201ENST00000504263 GPHB5Q86YW7 130 aa2.59□□□□□ -1.99
PCAT4-201ENST00000504263 MRPL53Q96EL3 112 aaKnown RBP2.59□□□□□ -1.99
PCAT4-201ENST00000504263 TTTY12Q9BZ98 90 aa2.59□□□□□ -1.99
PCAT4-201ENST00000504263 LENEPQ9Y5L5 61 aa2.59□□□□□ -1.99
PCAT4-201ENST00000504263 FBN2P35556 2912 aa2.59□□□□□ -1.99
PCAT4-201ENST00000504263 IGKV2-40A0A087WW87 121 aaPredicted RBP2.59□□□□□ -2
PCAT4-201ENST00000504263 TRAV13-2A0A0B4J235 113 aa2.59□□□□□ -2
PCAT4-201ENST00000504263 A0A0U1RQV1 116 aa2.59□□□□□ -2
PCAT4-201ENST00000504263 PINLYPA6NC86 204 aa2.59□□□□□ -2
PCAT4-201ENST00000504263 VCYO14598 125 aa2.59□□□□□ -2
PCAT4-201ENST00000504263 ZNHIT1O43257 154 aa2.59□□□□□ -2
PCAT4-201ENST00000504263 IGKV2D-40P01614 121 aaPredicted RBP2.59□□□□□ -2
PCAT4-201ENST00000504263 MAGEA5P43359 124 aa2.59□□□□□ -2
PCAT4-201ENST00000504263 RPL27AP46776 148 aaKnown RBP2.59□□□□□ -2
PCAT4-201ENST00000504263 SPANXN1Q5VSR9 72 aa2.59□□□□□ -2
PCAT4-201ENST00000504263 C20orf197Q8N268 126 aa2.59□□□□□ -2
PCAT4-201ENST00000504263 KLK15Q9H2R5 256 aa2.59□□□□□ -2
PCAT4-201ENST00000504263 RNF7Q9UBF6 113 aa2.59□□□□□ -2
PCAT4-201ENST00000504263 F8P00451 2351 aa2.59□□□□□ -2
PCAT4-201ENST00000504263 MED13LQ71F56 2210 aa2.58□□□□□ -2
PCAT4-201ENST00000504263 ARFGEF3Q5TH69 2177 aa2.58□□□□□ -2
PCAT4-201ENST00000504263 IGHV1-58A0A0C4DH39 117 aa2.58□□□□□ -2
PCAT4-201ENST00000504263 TRBV27A0A0K0K1C4 114 aa2.58□□□□□ -2
PCAT4-201ENST00000504263 M0R1W7 72 aa2.58□□□□□ -2
PCAT4-201ENST00000504263 ERC2-IT1O76042 136 aa2.58□□□□□ -2
PCAT4-201ENST00000504263 IGHV3-48P01763 117 aa2.58□□□□□ -2
PCAT4-201ENST00000504263 RFPL3SP0C7P2 107 aa2.58□□□□□ -2
PCAT4-201ENST00000504263 HILS1P60008 231 aa2.58□□□□□ -2
PCAT4-201ENST00000504263 Q96MF0 132 aa2.58□□□□□ -2
PCAT4-201ENST00000504263 LINC00846Q9NV44 126 aa2.58□□□□□ -2
PCAT4-201ENST00000504263 HRNRQ86YZ3 2850 aaPredicted RBP2.58□□□□□ -2
PCAT4-201ENST00000504263 IGKV3D-7A0A0C4DH55 119 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 TEX22C9J3V5 150 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 IGHV3-9P01782 118 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 IGHV3-30-3P0DP02 117 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 RNASE4P34096 147 aaKnown RBP2.57□□□□□ -2
PCAT4-201ENST00000504263 C10orf55Q5SWW7 151 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 ADAMTSL4-AS1Q5T5F5 129 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 C9orf47Q6ZRZ4 202 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 LEAP2Q969E1 77 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 RNF5Q99942 180 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 RETNQ9HD89 108 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 C11orf21Q9P2W6 132 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 ACANP16112 2415 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 ROS1P08922 2347 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 C2CD3Q4AC94 2353 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 A0A087WVE0 104 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 C19orf84I3L1E1 186 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 K7EIM0 57 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 TFF1P04155 84 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 RPL28P46779 137 aaKnown RBP2.57□□□□□ -2
PCAT4-201ENST00000504263 BLCAPP62952 87 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 DGAT2L7PQ6IED9 249 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 HCP5Q6MZN7 132 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 VMO1Q7Z5L0 202 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 Q8N2B8 174 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 Q8TAT8 98 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 FAM110DQ8TAY7 271 aaPredicted RBP2.57□□□□□ -2
PCAT4-201ENST00000504263 RPL39LQ96EH5 51 aaKnown RBP2.57□□□□□ -2
PCAT4-201ENST00000504263 FAM215AQ9Y5M1 114 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 KIF25-AS1Q9Y6Z4 181 aa2.57□□□□□ -2
PCAT4-201ENST00000504263 ZNF469Q96JG9 3925 aaPredicted RBP2.57□□□□□ -2
PCAT4-201ENST00000504263 MALRD1Q5VYJ5 2156 aa2.56□□□□□ -2
PCAT4-201ENST00000504263 FLNAP21333 2647 aaKnown RBP2.56□□□□□ -2
PCAT4-201ENST00000504263 SOCS3O14543 225 aa2.56□□□□□ -2
PCAT4-201ENST00000504263 IGKV3-15P01624 115 aa2.56□□□□□ -2
PCAT4-201ENST00000504263 TRBV12-3P01733 135 aa2.56□□□□□ -2
PCAT4-201ENST00000504263 SAA4P35542 130 aa2.56□□□□□ -2
PCAT4-201ENST00000504263 LINC00315P59091 139 aa2.56□□□□□ -2
PCAT4-201ENST00000504263 RPL11P62913 178 aaKnown RBP2.56□□□□□ -2
PCAT4-201ENST00000504263 RBM3P98179 157 aaKnown RBP2.56□□□□□ -2
PCAT4-201ENST00000504263 CIRBPQ14011 172 aaKnown RBP2.56□□□□□ -2
PCAT4-201ENST00000504263 HIST2H2BDQ6DRA6 164 aa2.56□□□□□ -2
PCAT4-201ENST00000504263 STHQ8IWL8 128 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms