RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 IGKV3D-7A0A0C4DH55 119 aa12.94□□□□□ -0.34
POLR2J3-209ENST00000504157 IGHV3-11P01762 117 aa12.94□□□□□ -0.34
POLR2J3-209ENST00000504157 NDUFC2-KCTD14E9PQ53 114 aa12.94□□□□□ -0.34
POLR2J3-209ENST00000504157 IGLV5-45A0A087WSX0 123 aa12.93□□□□□ -0.34
POLR2J3-209ENST00000504157 SOSTDC1Q6X4U4 206 aa12.93□□□□□ -0.34
POLR2J3-209ENST00000504157 CDKN2A-AS1Q9UH64 79 aa12.93□□□□□ -0.34
POLR2J3-209ENST00000504157 UBE2D4Q9Y2X8 147 aa12.92□□□□□ -0.34
POLR2J3-209ENST00000504157 A0A087WVE0 104 aa12.92□□□□□ -0.34
POLR2J3-209ENST00000504157 IGLV1-40P01703 118 aa12.92□□□□□ -0.34
POLR2J3-209ENST00000504157 LINC00846Q9NV44 126 aa12.92□□□□□ -0.34
POLR2J3-209ENST00000504157 RS1O15537 224 aa12.91□□□□□ -0.34
POLR2J3-209ENST00000504157 OBSCN-AS1Q96MR7 158 aa12.91□□□□□ -0.34
POLR2J3-209ENST00000504157 Q9HAA7 133 aa12.91□□□□□ -0.34
POLR2J3-209ENST00000504157 KMT2BQ9UMN6 2715 aaPredicted RBP12.91□□□□□ -0.34
POLR2J3-209ENST00000504157 TRAV12-2A0A075B6T6 113 aa12.9□□□□□ -0.34
POLR2J3-209ENST00000504157 NDUFC2O95298 119 aa12.9□□□□□ -0.34
POLR2J3-209ENST00000504157 Q9H8V8 135 aa12.9□□□□□ -0.34
POLR2J3-209ENST00000504157 CDSNQ15517 529 aa12.9□□□□□ -0.34
POLR2J3-209ENST00000504157 HIST2H2BCQ6DN03 193 aa12.9□□□□□ -0.34
POLR2J3-209ENST00000504157 HIST2H2BDQ6DRA6 164 aa12.9□□□□□ -0.34
POLR2J3-209ENST00000504157 CHCHD7Q9BUK0 85 aa12.9□□□□□ -0.34
POLR2J3-209ENST00000504157 IGLV5-39A0A0G2JS06 123 aa12.89□□□□□ -0.35
POLR2J3-209ENST00000504157 CCL21O00585 134 aa12.89□□□□□ -0.35
POLR2J3-209ENST00000504157 SNRPD3P62318 126 aaKnown RBP12.89□□□□□ -0.35
POLR2J3-209ENST00000504157 FHL2Q14192 279 aa12.89□□□□□ -0.35
POLR2J3-209ENST00000504157 LRBAP50851 2863 aa12.89□□□□□ -0.35
POLR2J3-209ENST00000504157 ZNF843Q8N446 348 aa12.89□□□□□ -0.35
POLR2J3-209ENST00000504157 GNLYP22749 145 aa12.88□□□□□ -0.35
POLR2J3-209ENST00000504157 RPL28P46779 137 aaKnown RBP12.88□□□□□ -0.35
POLR2J3-209ENST00000504157 OVOL2Q9BRP0 275 aa12.88□□□□□ -0.35
POLR2J3-209ENST00000504157 EDN2P20800 178 aa12.88□□□□□ -0.35
POLR2J3-209ENST00000504157 ADORA2A-AS1P86434 159 aa12.88□□□□□ -0.35
POLR2J3-209ENST00000504157 PIK3CD-AS1Q5SR53 167 aa12.88□□□□□ -0.35
POLR2J3-209ENST00000504157 C10orf105Q8TEF2 133 aa12.88□□□□□ -0.35
POLR2J3-209ENST00000504157 C14orf132Q9NPU4 83 aa12.88□□□□□ -0.35
POLR2J3-209ENST00000504157 PRO0628Q9UI54 55 aa12.88□□□□□ -0.35
POLR2J3-209ENST00000504157 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.87□□□□□ -0.35
POLR2J3-209ENST00000504157 EPM2AB3EWF7 344 aa12.86□□□□□ -0.35
POLR2J3-209ENST00000504157 K7EQG2 157 aa12.86□□□□□ -0.35
POLR2J3-209ENST00000504157 PF4P02776 101 aa12.86□□□□□ -0.35
POLR2J3-209ENST00000504157 CFHR3Q02985 330 aa12.86□□□□□ -0.35
POLR2J3-209ENST00000504157 CHD6Q8TD26 2715 aa12.86□□□□□ -0.35
POLR2J3-209ENST00000504157 SPINK13Q1W4C9 94 aa12.86□□□□□ -0.35
POLR2J3-209ENST00000504157 C9orf129Q5T035 196 aaKnown RBP12.86□□□□□ -0.35
POLR2J3-209ENST00000504157 BPESC1Q9GZL8 116 aa12.86□□□□□ -0.35
POLR2J3-209ENST00000504157 A0A0U1RRA0 63 aa12.85□□□□□ -0.35
POLR2J3-209ENST00000504157 A6NDX4 124 aa12.85□□□□□ -0.35
POLR2J3-209ENST00000504157 ZNF625Q96I27 306 aaPredicted RBP12.85□□□□□ -0.35
POLR2J3-209ENST00000504157 MED13LQ71F56 2210 aa12.84□□□□□ -0.35
POLR2J3-209ENST00000504157 PFN2P35080 140 aa12.84□□□□□ -0.35
POLR2J3-209ENST00000504157 HIVEP3Q5T1R4 2406 aa12.84□□□□□ -0.35
POLR2J3-209ENST00000504157 ZNF462Q96JM2 2506 aa12.84□□□□□ -0.35
POLR2J3-209ENST00000504157 TRAV13-2A0A0B4J235 113 aa12.84□□□□□ -0.35
POLR2J3-209ENST00000504157 A0A1W2PPR1 153 aa12.84□□□□□ -0.35
POLR2J3-209ENST00000504157 IGKV3-20P01619 116 aa12.84□□□□□ -0.35
POLR2J3-209ENST00000504157 HOXD3P31249 432 aaPredicted RBP12.84□□□□□ -0.35
POLR2J3-209ENST00000504157 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.83□□□□□ -0.36
POLR2J3-209ENST00000504157 IGKV2-29A2NJV5 120 aaPredicted RBP12.83□□□□□ -0.36
POLR2J3-209ENST00000504157 PSMB8P28062 276 aa12.82□□□□□ -0.36
POLR2J3-209ENST00000504157 LINC00467Q9BRT7 94 aa12.82□□□□□ -0.36
POLR2J3-209ENST00000504157 FAM208BQ5VWN6 2430 aa12.82□□□□□ -0.36
POLR2J3-209ENST00000504157 HRNRQ86YZ3 2850 aaPredicted RBP12.82□□□□□ -0.36
POLR2J3-209ENST00000504157 COX6A2Q02221 97 aa12.82□□□□□ -0.36
POLR2J3-209ENST00000504157 FAM19A3Q7Z5A8 133 aa12.81□□□□□ -0.36
POLR2J3-209ENST00000504157 PROK1P58294 105 aa12.81□□□□□ -0.36
POLR2J3-209ENST00000504157 BRD3OSQ6XYD6 125 aa12.8□□□□□ -0.36
POLR2J3-209ENST00000504157 A0A087WYN8 130 aa12.8□□□□□ -0.36
POLR2J3-209ENST00000504157 LY6EQ16553 131 aa12.8□□□□□ -0.36
POLR2J3-209ENST00000504157 LINC00336Q6ZUF6 198 aa12.8□□□□□ -0.36
POLR2J3-209ENST00000504157 IGHV3-73A0A0B4J1V6 119 aa12.79□□□□□ -0.36
POLR2J3-209ENST00000504157 FAM236DA0A1B0GTK5 79 aa12.79□□□□□ -0.36
POLR2J3-209ENST00000504157 GHRHP01286 108 aa12.79□□□□□ -0.36
POLR2J3-209ENST00000504157 FAM236CP0DP71 79 aa12.79□□□□□ -0.36
POLR2J3-209ENST00000504157 BLCAPP62952 87 aa12.79□□□□□ -0.36
POLR2J3-209ENST00000504157 TMEM243Q9BU79 118 aa12.79□□□□□ -0.36
POLR2J3-209ENST00000504157 SERP1Q9Y6X1 66 aa12.79□□□□□ -0.36
POLR2J3-209ENST00000504157 SMIM1B2RUZ4 78 aa12.78□□□□□ -0.36
POLR2J3-209ENST00000504157 H3BUX3 64 aa12.78□□□□□ -0.36
POLR2J3-209ENST00000504157 CRPP02741 224 aa12.78□□□□□ -0.36
POLR2J3-209ENST00000504157 RBMY1A1P0DJD3 496 aaKnown RBP12.78□□□□□ -0.36
POLR2J3-209ENST00000504157 RBMY1CP0DJD4 496 aa12.78□□□□□ -0.36
POLR2J3-209ENST00000504157 RBMY1FQ15415 496 aaKnown RBP12.78□□□□□ -0.36
POLR2J3-209ENST00000504157 LINC00242Q5T6M2 205 aa12.78□□□□□ -0.36
POLR2J3-209ENST00000504157 A8MTW9 85 aa12.77□□□□□ -0.36
POLR2J3-209ENST00000504157 J3QLI3 93 aa12.77□□□□□ -0.36
POLR2J3-209ENST00000504157 ATP5EP2Q5VTU8 51 aa12.77□□□□□ -0.36
POLR2J3-209ENST00000504157 Q9UF83 564 aa12.77□□□□□ -0.36
POLR2J3-209ENST00000504157 IGHV3OR16-12A0A075B7B8 117 aa12.77□□□□□ -0.37
POLR2J3-209ENST00000504157 F8WDY8 70 aa12.77□□□□□ -0.37
POLR2J3-209ENST00000504157 H0YGX0 51 aa12.77□□□□□ -0.37
POLR2J3-209ENST00000504157 RBMY1BA6NDE4 496 aaKnown RBP12.76□□□□□ -0.37
POLR2J3-209ENST00000504157 RBMY1EA6NEQ0 496 aaKnown RBP12.76□□□□□ -0.37
POLR2J3-209ENST00000504157 IGHV3-53P01767 116 aa12.76□□□□□ -0.37
POLR2J3-209ENST00000504157 RBMY1DP0C7P1 496 aaKnown RBP12.76□□□□□ -0.37
POLR2J3-209ENST00000504157 Q6ZSN1 163 aa12.76□□□□□ -0.37
POLR2J3-209ENST00000504157 LINC00337Q8N6G1 96 aa12.76□□□□□ -0.37
POLR2J3-209ENST00000504157 COL12A1Q99715 3063 aa12.76□□□□□ -0.37
POLR2J3-209ENST00000504157 S100A7L2Q5SY68 101 aa12.76□□□□□ -0.37
POLR2J3-209ENST00000504157 SPTBN1Q01082 2364 aaKnown RBP12.75□□□□□ -0.37
POLR2J3-209ENST00000504157 HILS1P60008 231 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms