RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 SUMO2P61956 95 aaKnown RBP2.15□□□□□ -2.07
USP46-205ENST00000504078 IL15RAQ13261 267 aa2.15□□□□□ -2.07
USP46-205ENST00000504078 TWIST1Q15672 202 aa2.15□□□□□ -2.07
USP46-205ENST00000504078 C9orf116Q5BN46 136 aaPredicted RBP2.15□□□□□ -2.07
USP46-205ENST00000504078 PIK3CD-AS1Q5SR53 167 aa2.15□□□□□ -2.07
USP46-205ENST00000504078 FAM162BQ5T6X4 162 aa2.15□□□□□ -2.07
USP46-205ENST00000504078 SPANXN1Q5VSR9 72 aa2.15□□□□□ -2.07
USP46-205ENST00000504078 CD164L2Q6UWJ8 174 aa2.15□□□□□ -2.07
USP46-205ENST00000504078 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.15□□□□□ -2.07
USP46-205ENST00000504078 FER1L6-AS1Q8NA97 138 aa2.15□□□□□ -2.07
USP46-205ENST00000504078 DIRC1Q969H9 104 aa2.15□□□□□ -2.07
USP46-205ENST00000504078 AP1S3Q96PC3 154 aa2.15□□□□□ -2.07
USP46-205ENST00000504078 OPRPNQ99935 248 aaPredicted RBP2.15□□□□□ -2.07
USP46-205ENST00000504078 FSIP2Q5CZC0 6907 aa2.15□□□□□ -2.07
USP46-205ENST00000504078 IGLV4-69A0A075B6H9 119 aa2.14□□□□□ -2.07
USP46-205ENST00000504078 IGLV1-50A0A075B6I6 118 aa2.14□□□□□ -2.07
USP46-205ENST00000504078 TRAV1-1A0A0B4J248 108 aa2.14□□□□□ -2.07
USP46-205ENST00000504078 A0A1B0GV50 99 aa2.14□□□□□ -2.07
USP46-205ENST00000504078 CENPXA8MT69 81 aa2.14□□□□□ -2.07
USP46-205ENST00000504078 PLA2G10O15496 165 aa2.14□□□□□ -2.07
USP46-205ENST00000504078 NPSP0C0P6 89 aa2.14□□□□□ -2.07
USP46-205ENST00000504078 SMIM17P0DL12 118 aa2.14□□□□□ -2.07
USP46-205ENST00000504078 RPL12P30050 165 aaKnown RBP2.14□□□□□ -2.07
USP46-205ENST00000504078 AKR1C3P42330 323 aa2.14□□□□□ -2.07
USP46-205ENST00000504078 UBE2G1P62253 170 aa2.14□□□□□ -2.07
USP46-205ENST00000504078 SYCNQ0VAF6 134 aa2.14□□□□□ -2.07
USP46-205ENST00000504078 RNASE13Q5GAN3 156 aaKnown RBP2.14□□□□□ -2.07
USP46-205ENST00000504078 SAPCD1Q5SSQ6 148 aa2.14□□□□□ -2.07
USP46-205ENST00000504078 AMMECR1LQ6DCA0 310 aa2.14□□□□□ -2.07
USP46-205ENST00000504078 PPP1R1CQ8WVI7 109 aa2.14□□□□□ -2.07
USP46-205ENST00000504078 A0A087X002 238 aa2.13□□□□□ -2.07
USP46-205ENST00000504078 IGHV1-58A0A0C4DH39 117 aa2.13□□□□□ -2.07
USP46-205ENST00000504078 LOC107984640A0A0U1RRK4 108 aa2.13□□□□□ -2.07
USP46-205ENST00000504078 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.13□□□□□ -2.07
USP46-205ENST00000504078 M0QXV9 152 aa2.13□□□□□ -2.07
USP46-205ENST00000504078 M0QY20 66 aa2.13□□□□□ -2.07
USP46-205ENST00000504078 ATP6V0CP27449 155 aa2.13□□□□□ -2.07
USP46-205ENST00000504078 H2BFSP57053 126 aa2.13□□□□□ -2.07
USP46-205ENST00000504078 LINC01547P58512 204 aaPredicted RBP2.13□□□□□ -2.07
USP46-205ENST00000504078 UBE2BP63146 152 aa2.13□□□□□ -2.07
USP46-205ENST00000504078 MEF2BQ02080 365 aaPredicted RBP2.13□□□□□ -2.07
USP46-205ENST00000504078 ZNF726P1Q15940 193 aa2.13□□□□□ -2.07
USP46-205ENST00000504078 TMEM97Q5BJF2 176 aa2.13□□□□□ -2.07
USP46-205ENST00000504078 C6orf226Q5I0X4 101 aa2.13□□□□□ -2.07
USP46-205ENST00000504078 DNLZQ5SXM8 178 aa2.13□□□□□ -2.07
USP46-205ENST00000504078 Q75L30 129 aa2.13□□□□□ -2.07
USP46-205ENST00000504078 DEDD2Q8WXF8 326 aa2.13□□□□□ -2.07
USP46-205ENST00000504078 RPL39LQ96EH5 51 aaKnown RBP2.13□□□□□ -2.07
USP46-205ENST00000504078 KRTAP4-1Q9BYQ7 146 aa2.13□□□□□ -2.07
USP46-205ENST00000504078 ANAPC11Q9NYG5 84 aa2.13□□□□□ -2.07
USP46-205ENST00000504078 LINC00474Q9P2X8 69 aa2.13□□□□□ -2.07
USP46-205ENST00000504078 FAM74A7A6NL05 159 aa2.12□□□□□ -2.07
USP46-205ENST00000504078 SNAI2O43623 268 aa2.12□□□□□ -2.07
USP46-205ENST00000504078 APOMO95445 188 aa2.12□□□□□ -2.07
USP46-205ENST00000504078 MPC2O95563 127 aa2.12□□□□□ -2.07
USP46-205ENST00000504078 CXorf1O96002 111 aa2.12□□□□□ -2.07
USP46-205ENST00000504078 LTAP01374 205 aa2.12□□□□□ -2.07
USP46-205ENST00000504078 OR5AL1P0C617 328 aa2.12□□□□□ -2.07
USP46-205ENST00000504078 FGF6P10767 208 aa2.12□□□□□ -2.07
USP46-205ENST00000504078 SPAG11BQ08648 103 aa2.12□□□□□ -2.07
USP46-205ENST00000504078 GAGE2EQ4V326 116 aa2.12□□□□□ -2.07
USP46-205ENST00000504078 RASL11AQ6T310 242 aa2.12□□□□□ -2.07
USP46-205ENST00000504078 OR5A1Q8NGJ0 315 aa2.12□□□□□ -2.07
USP46-205ENST00000504078 STOML3Q8TAV4 291 aa2.12□□□□□ -2.07
USP46-205ENST00000504078 FMC1Q96HJ9 113 aa2.12□□□□□ -2.07
USP46-205ENST00000504078 CAMK2N2Q96S95 79 aa2.12□□□□□ -2.07
USP46-205ENST00000504078 KRTAP4-3Q9BYR4 195 aa2.12□□□□□ -2.07
USP46-205ENST00000504078 TMEM167BQ9NRX6 74 aa2.12□□□□□ -2.07
USP46-205ENST00000504078 GAGE2DQ9UEU5 116 aa2.12□□□□□ -2.07
USP46-205ENST00000504078 LINC00959A0A1B0GUT2 108 aa2.11□□□□□ -2.07
USP46-205ENST00000504078 A0A1B0GUV1 79 aa2.11□□□□□ -2.07
USP46-205ENST00000504078 LOC105371267A0A1B0GV96 52 aa2.11□□□□□ -2.07
USP46-205ENST00000504078 SMLR1H3BR10 107 aa2.11□□□□□ -2.07
USP46-205ENST00000504078 BCL2L11O43521 198 aa2.11□□□□□ -2.07
USP46-205ENST00000504078 APCSP02743 223 aa2.11□□□□□ -2.07
USP46-205ENST00000504078 CRYGAP11844 174 aa2.11□□□□□ -2.07
USP46-205ENST00000504078 RPL13AP40429 203 aaKnown RBP2.11□□□□□ -2.07
USP46-205ENST00000504078 PAPPA-AS1Q5QFB9 102 aa2.11□□□□□ -2.07
USP46-205ENST00000504078 EIF5AL1Q6IS14 154 aaKnown RBP2.11□□□□□ -2.07
USP46-205ENST00000504078 C5orf38Q86SI9 138 aa2.11□□□□□ -2.07
USP46-205ENST00000504078 KRTAP7-1Q8IUC3 87 aa2.11□□□□□ -2.07
USP46-205ENST00000504078 NUP35Q8NFH5 326 aa2.11□□□□□ -2.07
USP46-205ENST00000504078 TYMSOSQ8TAI1 123 aa2.11□□□□□ -2.07
USP46-205ENST00000504078 ACTR3CQ9C0K3 210 aaPredicted RBP2.11□□□□□ -2.07
USP46-205ENST00000504078 RBM38Q9H0Z9 239 aaKnown RBP2.11□□□□□ -2.07
USP46-205ENST00000504078 TMEM242Q9NWH2 141 aa2.11□□□□□ -2.07
USP46-205ENST00000504078 PKIGQ9Y2B9 76 aa2.11□□□□□ -2.07
USP46-205ENST00000504078 IGLV7-46A0A075B6I9 117 aa2.1□□□□□ -2.07
USP46-205ENST00000504078 A0A1B0GW15 77 aa2.1□□□□□ -2.07
USP46-205ENST00000504078 A0A1W2PRE2 83 aa2.1□□□□□ -2.07
USP46-205ENST00000504078 MAP1LC3B2A6NCE7 125 aa2.1□□□□□ -2.07
USP46-205ENST00000504078 INMT-MINDY4F8WBC2 141 aa2.1□□□□□ -2.07
USP46-205ENST00000504078 SSNA1O43805 119 aa2.1□□□□□ -2.07
USP46-205ENST00000504078 PET100P0DJ07 73 aa2.1□□□□□ -2.07
USP46-205ENST00000504078 NTF3P20783 257 aa2.1□□□□□ -2.07
USP46-205ENST00000504078 C10orf25Q5T742 122 aa2.1□□□□□ -2.07
USP46-205ENST00000504078 GAGE2AQ6NT46 116 aa2.1□□□□□ -2.07
USP46-205ENST00000504078 Q6ZUT4 128 aa2.1□□□□□ -2.07
USP46-205ENST00000504078 ENKURQ8TC29 256 aa2.1□□□□□ -2.07
USP46-205ENST00000504078 TMEM18Q96B42 140 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms