RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 DAZ2Q13117 558 aaKnown RBP10.76□□□□□ -0.69
SNF8-203ENST00000504000 DAZ4Q86SG3 579 aaKnown RBP10.76□□□□□ -0.69
SNF8-203ENST00000504000 CITED2Q99967 270 aaPredicted RBP10.76□□□□□ -0.69
SNF8-203ENST00000504000 DAZ3Q9NR90 486 aaKnown RBP10.76□□□□□ -0.69
SNF8-203ENST00000504000 CREBBPQ92793 2442 aa10.76□□□□□ -0.69
SNF8-203ENST00000504000 TRAV4A0A0B4J268 109 aa10.75□□□□□ -0.69
SNF8-203ENST00000504000 HERV-K104P63124 156 aa10.75□□□□□ -0.69
SNF8-203ENST00000504000 COX6A2Q02221 97 aa10.75□□□□□ -0.69
SNF8-203ENST00000504000 Q9H8V8 135 aa10.75□□□□□ -0.69
SNF8-203ENST00000504000 RPL36AP83881 106 aaKnown RBP10.74□□□□□ -0.69
SNF8-203ENST00000504000 SHISA2Q6UWI4 295 aa10.74□□□□□ -0.69
SNF8-203ENST00000504000 CLEC2BQ92478 149 aa10.74□□□□□ -0.69
SNF8-203ENST00000504000 RPL36ALQ969Q0 106 aaKnown RBP10.74□□□□□ -0.69
SNF8-203ENST00000504000 PKD1L2Q7Z442 2459 aa10.74□□□□□ -0.69
SNF8-203ENST00000504000 CFAP46Q8IYW2 2715 aa10.74□□□□□ -0.69
SNF8-203ENST00000504000 SMIM1B2RUZ4 78 aa10.74□□□□□ -0.69
SNF8-203ENST00000504000 COX7A2LO14548 114 aa10.74□□□□□ -0.69
SNF8-203ENST00000504000 CRLF1O75462 422 aa10.74□□□□□ -0.69
SNF8-203ENST00000504000 NDUFV3P56181 108 aaKnown RBP10.74□□□□□ -0.69
SNF8-203ENST00000504000 GAGE5Q13069 117 aa10.74□□□□□ -0.69
SNF8-203ENST00000504000 GAGE6Q13070 117 aa10.74□□□□□ -0.69
SNF8-203ENST00000504000 Q6ZSV7 163 aa10.74□□□□□ -0.69
SNF8-203ENST00000504000 NHLRC4P0CG21 123 aaPredicted RBP10.73□□□□□ -0.69
SNF8-203ENST00000504000 NPC2P61916 151 aa10.73□□□□□ -0.69
SNF8-203ENST00000504000 C1orf158Q8N1D5 194 aa10.73□□□□□ -0.69
SNF8-203ENST00000504000 TMEM86BQ8N661 226 aa10.73□□□□□ -0.69
SNF8-203ENST00000504000 C15orf53Q8NAA6 179 aa10.73□□□□□ -0.69
SNF8-203ENST00000504000 ZNF625Q96I27 306 aaPredicted RBP10.73□□□□□ -0.69
SNF8-203ENST00000504000 K7EQD1 137 aa10.72□□□□□ -0.69
SNF8-203ENST00000504000 ACYP1P07311 99 aa10.72□□□□□ -0.69
SNF8-203ENST00000504000 ODF3L2Q3SX64 289 aa10.72□□□□□ -0.69
SNF8-203ENST00000504000 MAPK1IP1LQ8NDC0 245 aa10.72□□□□□ -0.69
SNF8-203ENST00000504000 CRYBG3Q68DQ2 2970 aa10.72□□□□□ -0.69
SNF8-203ENST00000504000 TTC32Q5I0X7 151 aa10.72□□□□□ -0.69
SNF8-203ENST00000504000 CDC42SE2Q9NRR3 84 aa10.72□□□□□ -0.69
SNF8-203ENST00000504000 USP9XQ93008 2570 aaPredicted RBP10.71□□□□□ -0.69
SNF8-203ENST00000504000 STHQ8IWL8 128 aa10.71□□□□□ -0.69
SNF8-203ENST00000504000 LRRC75A-AS1Q8N1F1 130 aa10.71□□□□□ -0.69
SNF8-203ENST00000504000 DAND5Q8N907 189 aa10.71□□□□□ -0.69
SNF8-203ENST00000504000 MAP1AP78559 2803 aaPredicted RBP10.71□□□□□ -0.7
SNF8-203ENST00000504000 F5H768 121 aa10.7□□□□□ -0.7
SNF8-203ENST00000504000 LINC00694P0DN24 101 aa10.7□□□□□ -0.7
SNF8-203ENST00000504000 XCL2Q9UBD3 114 aa10.7□□□□□ -0.7
SNF8-203ENST00000504000 FLNCQ14315 2725 aa10.7□□□□□ -0.7
SNF8-203ENST00000504000 TRACP01848 142 aa10.7□□□□□ -0.7
SNF8-203ENST00000504000 PF4P02776 101 aa10.7□□□□□ -0.7
SNF8-203ENST00000504000 NTM-AS1Q6ZSK4 140 aa10.7□□□□□ -0.7
SNF8-203ENST00000504000 TRGV1A0A0A0MS02 117 aa10.69□□□□□ -0.7
SNF8-203ENST00000504000 TRBV7-7A0A0K0K1E9 115 aa10.68□□□□□ -0.7
SNF8-203ENST00000504000 CMC4P56277 68 aaPredicted RBP10.68□□□□□ -0.7
SNF8-203ENST00000504000 PRIMA1Q86XR5 153 aa10.68□□□□□ -0.7
SNF8-203ENST00000504000 USP9YO00507 2555 aaPredicted RBP10.68□□□□□ -0.7
SNF8-203ENST00000504000 SOSTDC1Q6X4U4 206 aa10.68□□□□□ -0.7
SNF8-203ENST00000504000 KHDC1LQ5JSQ8 128 aa10.67□□□□□ -0.7
SNF8-203ENST00000504000 FAM222AQ5U5X8 452 aa10.67□□□□□ -0.7
SNF8-203ENST00000504000 IMUPQ9GZP8 106 aa10.67□□□□□ -0.7
SNF8-203ENST00000504000 GAGE12JA6NER3 117 aa10.66□□□□□ -0.7
SNF8-203ENST00000504000 GAGE7O76087 117 aa10.66□□□□□ -0.7
SNF8-203ENST00000504000 GAGE12FP0CL80 117 aa10.66□□□□□ -0.7
SNF8-203ENST00000504000 GAGE12GP0CL81 117 aa10.66□□□□□ -0.7
SNF8-203ENST00000504000 GAGE12IP0CL82 117 aa10.66□□□□□ -0.7
SNF8-203ENST00000504000 GAGE4Q13068 117 aa10.66□□□□□ -0.7
SNF8-203ENST00000504000 MXRA5Q9NR99 2828 aa10.66□□□□□ -0.7
SNF8-203ENST00000504000 ANKRD17O75179 2603 aaKnown RBP10.66□□□□□ -0.7
SNF8-203ENST00000504000 CR1P17927 2039 aa10.66□□□□□ -0.7
SNF8-203ENST00000504000 TRAV13-1A0A0B4J241 112 aa10.66□□□□□ -0.7
SNF8-203ENST00000504000 MEIG1Q5JSS6 88 aa10.66□□□□□ -0.7
SNF8-203ENST00000504000 DEFB113Q30KQ7 82 aa10.65□□□□□ -0.7
SNF8-203ENST00000504000 Q6ZTI0 123 aa10.65□□□□□ -0.7
SNF8-203ENST00000504000 TMEM243Q9BU79 118 aa10.65□□□□□ -0.7
SNF8-203ENST00000504000 TRAV13-2A0A0B4J235 113 aa10.64□□□□□ -0.71
SNF8-203ENST00000504000 FAM110AQ9BQ89 295 aa10.64□□□□□ -0.71
SNF8-203ENST00000504000 TRBV6-4A0A1B0GX49 114 aa10.64□□□□□ -0.71
SNF8-203ENST00000504000 NDUFA7O95182 113 aa10.64□□□□□ -0.71
SNF8-203ENST00000504000 HIST2H2BCQ6DN03 193 aa10.64□□□□□ -0.71
SNF8-203ENST00000504000 HIST2H2BDQ6DRA6 164 aa10.64□□□□□ -0.71
SNF8-203ENST00000504000 UBE2L6O14933 153 aa10.63□□□□□ -0.71
SNF8-203ENST00000504000 RPL28P46779 137 aaKnown RBP10.63□□□□□ -0.71
SNF8-203ENST00000504000 SDIM1Q6ZPB5 146 aa10.63□□□□□ -0.71
SNF8-203ENST00000504000 C16orf74Q96GX8 76 aa10.63□□□□□ -0.71
SNF8-203ENST00000504000 ZANQ9Y493 2812 aa10.63□□□□□ -0.71
SNF8-203ENST00000504000 OVOL2Q9BRP0 275 aa10.62□□□□□ -0.71
SNF8-203ENST00000504000 IGSF10Q6WRI0 2623 aa10.62□□□□□ -0.71
SNF8-203ENST00000504000 CCL24O00175 119 aa10.61□□□□□ -0.71
SNF8-203ENST00000504000 Q96MF0 132 aa10.61□□□□□ -0.71
SNF8-203ENST00000504000 CACNA1AO00555 2505 aa10.61□□□□□ -0.71
SNF8-203ENST00000504000 A0A0U1RRA0 63 aa10.59□□□□□ -0.71
SNF8-203ENST00000504000 PLAC8L1A1L4L8 177 aa10.59□□□□□ -0.71
SNF8-203ENST00000504000 B5MCH6 92 aa10.59□□□□□ -0.71
SNF8-203ENST00000504000 BAALC-AS2P0C853 105 aa10.59□□□□□ -0.71
SNF8-203ENST00000504000 LINC00643Q86TS7 51 aa10.59□□□□□ -0.71
SNF8-203ENST00000504000 NOP10Q9NPE3 64 aaKnown RBP10.59□□□□□ -0.71
SNF8-203ENST00000504000 FBN2P35556 2912 aa10.59□□□□□ -0.71
SNF8-203ENST00000504000 PIEZO1Q92508 2521 aa10.59□□□□□ -0.71
SNF8-203ENST00000504000 GIG44P09565 113 aaPredicted RBP10.59□□□□□ -0.71
SNF8-203ENST00000504000 INAFM2P0DMQ5 153 aa10.59□□□□□ -0.71
SNF8-203ENST00000504000 COX7B2Q8TF08 81 aa10.59□□□□□ -0.71
SNF8-203ENST00000504000 SVIPQ8NHG7 77 aa10.58□□□□□ -0.72
SNF8-203ENST00000504000 UTP20O75691 2785 aaKnown RBP10.58□□□□□ -0.72
SNF8-203ENST00000504000 MYO18BQ8IUG5 2567 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms