RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 RPL35P42766 123 aaKnown RBP9.35□□□□□ -0.91
PDLIM7-210ENST00000503827 DEFA1P59665 94 aa9.35□□□□□ -0.91
PDLIM7-210ENST00000503827 IFITM3Q01628 133 aa9.35□□□□□ -0.91
PDLIM7-210ENST00000503827 C1orf196B1AJZ1 125 aa9.34□□□□□ -0.91
PDLIM7-210ENST00000503827 I3L3M4 83 aa9.34□□□□□ -0.91
PDLIM7-210ENST00000503827 IFNA1P01562 189 aa9.34□□□□□ -0.91
PDLIM7-210ENST00000503827 UBE2BP63146 152 aa9.34□□□□□ -0.91
PDLIM7-210ENST00000503827 TWIST1Q15672 202 aa9.34□□□□□ -0.91
PDLIM7-210ENST00000503827 FAM19A5Q7Z5A7 132 aaPredicted RBP9.34□□□□□ -0.91
PDLIM7-210ENST00000503827 MRAP2Q96G30 205 aa9.33□□□□□ -0.92
PDLIM7-210ENST00000503827 IMMP2LQ96T52 175 aa9.33□□□□□ -0.92
PDLIM7-210ENST00000503827 G3V3Q6 166 aa9.32□□□□□ -0.92
PDLIM7-210ENST00000503827 SPAG11BQ08648 103 aa9.32□□□□□ -0.92
PDLIM7-210ENST00000503827 Q5BKY6 102 aa9.32□□□□□ -0.92
PDLIM7-210ENST00000503827 TEX261Q6UWH6 196 aa9.32□□□□□ -0.92
PDLIM7-210ENST00000503827 MRPL52Q86TS9 123 aaKnown RBP9.32□□□□□ -0.92
PDLIM7-210ENST00000503827 C9orf62Q8N4C0 152 aa9.32□□□□□ -0.92
PDLIM7-210ENST00000503827 SFT2D1Q8WV19 159 aa9.32□□□□□ -0.92
PDLIM7-210ENST00000503827 RPP21Q9H633 154 aaKnown RBP9.32□□□□□ -0.92
PDLIM7-210ENST00000503827 MUC17Q685J3 4493 aa9.32□□□□□ -0.92
PDLIM7-210ENST00000503827 A0A1B0GV50 99 aa9.31□□□□□ -0.92
PDLIM7-210ENST00000503827 CENPWQ5EE01 88 aa9.31□□□□□ -0.92
PDLIM7-210ENST00000503827 MRPL35Q9NZE8 188 aaKnown RBP9.31□□□□□ -0.92
PDLIM7-210ENST00000503827 NDUFA13Q9P0J0 144 aa9.31□□□□□ -0.92
PDLIM7-210ENST00000503827 CTRLP40313 264 aa9.3□□□□□ -0.92
PDLIM7-210ENST00000503827 LINC01547P58512 204 aaPredicted RBP9.3□□□□□ -0.92
PDLIM7-210ENST00000503827 C5orf38Q86SI9 138 aa9.3□□□□□ -0.92
PDLIM7-210ENST00000503827 KCNRGQ8N5I3 272 aa9.3□□□□□ -0.92
PDLIM7-210ENST00000503827 FXYD6-FXYD2A0A087WZ82 144 aa9.29□□□□□ -0.92
PDLIM7-210ENST00000503827 M0QXV9 152 aa9.29□□□□□ -0.92
PDLIM7-210ENST00000503827 ZNF861PO60384 105 aa9.29□□□□□ -0.92
PDLIM7-210ENST00000503827 TPRXLQ17RH7 258 aa9.29□□□□□ -0.92
PDLIM7-210ENST00000503827 SMIM15Q7Z3B0 74 aa9.29□□□□□ -0.92
PDLIM7-210ENST00000503827 TYMSOSQ8TAI1 123 aa9.29□□□□□ -0.92
PDLIM7-210ENST00000503827 MBD3L1Q8WWY6 194 aa9.29□□□□□ -0.92
PDLIM7-210ENST00000503827 FAM210AQ96ND0 272 aa9.29□□□□□ -0.92
PDLIM7-210ENST00000503827 CNFNQ9BYD5 112 aa9.29□□□□□ -0.92
PDLIM7-210ENST00000503827 ALG5Q9Y673 324 aa9.29□□□□□ -0.92
PDLIM7-210ENST00000503827 TSHBP01222 138 aa9.28□□□□□ -0.92
PDLIM7-210ENST00000503827 RETNLBQ9BQ08 111 aa9.28□□□□□ -0.92
PDLIM7-210ENST00000503827 TMEM242Q9NWH2 141 aa9.28□□□□□ -0.92
PDLIM7-210ENST00000503827 TRBV6-5A0A0K0K1A5 114 aa9.27□□□□□ -0.93
PDLIM7-210ENST00000503827 F8WDY8 70 aa9.27□□□□□ -0.93
PDLIM7-210ENST00000503827 TLX1NBP0CAT3 122 aa9.27□□□□□ -0.93
PDLIM7-210ENST00000503827 GAGE2EQ4V326 116 aa9.27□□□□□ -0.93
PDLIM7-210ENST00000503827 OR10D4PQ8NGN7 298 aa9.27□□□□□ -0.93
PDLIM7-210ENST00000503827 FAM213BQ8TBF2 198 aa9.27□□□□□ -0.93
PDLIM7-210ENST00000503827 SMIM12Q96EX1 92 aa9.27□□□□□ -0.93
PDLIM7-210ENST00000503827 GAGE2DQ9UEU5 116 aa9.27□□□□□ -0.93
PDLIM7-210ENST00000503827 A0A087X002 238 aa9.26□□□□□ -0.93
PDLIM7-210ENST00000503827 TRAV13-1A0A0B4J241 112 aa9.26□□□□□ -0.93
PDLIM7-210ENST00000503827 C7orf77A4D0Y5 90 aa9.26□□□□□ -0.93
PDLIM7-210ENST00000503827 NDUFA1O15239 70 aa9.26□□□□□ -0.93
PDLIM7-210ENST00000503827 TMEM241Q24JQ0 296 aa9.26□□□□□ -0.93
PDLIM7-210ENST00000503827 C11orf52Q96A22 123 aa9.26□□□□□ -0.93
PDLIM7-210ENST00000503827 BIN3Q9NQY0 253 aa9.26□□□□□ -0.93
PDLIM7-210ENST00000503827 CRYGAP11844 174 aa9.25□□□□□ -0.93
PDLIM7-210ENST00000503827 GNG4P50150 75 aa9.25□□□□□ -0.93
PDLIM7-210ENST00000503827 KRTAP7-1Q8IUC3 87 aa9.25□□□□□ -0.93
PDLIM7-210ENST00000503827 ST20Q9HBF5 79 aa9.25□□□□□ -0.93
PDLIM7-210ENST00000503827 CYTL1Q9NRR1 136 aa9.25□□□□□ -0.93
PDLIM7-210ENST00000503827 GIPP09681 153 aaPredicted RBP9.24□□□□□ -0.93
PDLIM7-210ENST00000503827 FOXA3P55318 350 aaPredicted RBP9.24□□□□□ -0.93
PDLIM7-210ENST00000503827 CCL20P78556 96 aa9.24□□□□□ -0.93
PDLIM7-210ENST00000503827 ORAOV1Q8WV07 137 aa9.24□□□□□ -0.93
PDLIM7-210ENST00000503827 IGLV7-46A0A075B6I9 117 aa9.23□□□□□ -0.93
PDLIM7-210ENST00000503827 RAB19A4D1S5 217 aa9.23□□□□□ -0.93
PDLIM7-210ENST00000503827 SMAGPQ0VAQ4 97 aa9.23□□□□□ -0.93
PDLIM7-210ENST00000503827 RNASE13Q5GAN3 156 aaKnown RBP9.23□□□□□ -0.93
PDLIM7-210ENST00000503827 RNASE7Q9H1E1 156 aaKnown RBP9.23□□□□□ -0.93
PDLIM7-210ENST00000503827 SMDT1Q9H4I9 107 aa9.23□□□□□ -0.93
PDLIM7-210ENST00000503827 CSDC2Q9Y534 153 aaKnown RBP9.23□□□□□ -0.93
PDLIM7-210ENST00000503827 UMAD1C9J7I0 102 aa9.22□□□□□ -0.93
PDLIM7-210ENST00000503827 H2AFB1P0C5Y9 115 aa9.22□□□□□ -0.93
PDLIM7-210ENST00000503827 C10orf25Q5T742 122 aa9.22□□□□□ -0.93
PDLIM7-210ENST00000503827 UNQ6190/PRO20217Q6UXQ8 127 aa9.22□□□□□ -0.93
PDLIM7-210ENST00000503827 NUDT10Q8NFP7 164 aa9.22□□□□□ -0.93
PDLIM7-210ENST00000503827 NUDT11Q96G61 164 aa9.22□□□□□ -0.93
PDLIM7-210ENST00000503827 C6orf48Q9UBA6 75 aa9.22□□□□□ -0.93
PDLIM7-210ENST00000503827 NUPR1O60356 82 aa9.21□□□□□ -0.94
PDLIM7-210ENST00000503827 MANBALQ9NQG1 85 aa9.21□□□□□ -0.94
PDLIM7-210ENST00000503827 TRBV27A0A0K0K1C4 114 aa9.2□□□□□ -0.94
PDLIM7-210ENST00000503827 POLR2KP53803 58 aaKnown RBP9.2□□□□□ -0.94
PDLIM7-210ENST00000503827 SRSF3P84103 164 aaKnown RBP9.2□□□□□ -0.94
PDLIM7-210ENST00000503827 LINC00173Q6ZV60 143 aa9.2□□□□□ -0.94
PDLIM7-210ENST00000503827 GNG13Q9P2W3 67 aa9.2□□□□□ -0.94
PDLIM7-210ENST00000503827 UBE2D4Q9Y2X8 147 aa9.2□□□□□ -0.94
PDLIM7-210ENST00000503827 ARPC5O15511 151 aa9.18□□□□□ -0.94
PDLIM7-210ENST00000503827 FCER1GP30273 86 aa9.18□□□□□ -0.94
PDLIM7-210ENST00000503827 TRBV20OR9-2A0A075B6H5 130 aa9.17□□□□□ -0.94
PDLIM7-210ENST00000503827 RPL28P46779 137 aaKnown RBP9.17□□□□□ -0.94
PDLIM7-210ENST00000503827 Q6ZUT4 128 aa9.17□□□□□ -0.94
PDLIM7-210ENST00000503827 LINC00304Q8N9R0 145 aa9.17□□□□□ -0.94
PDLIM7-210ENST00000503827 CTDSP1Q9GZU7 261 aa9.17□□□□□ -0.94
PDLIM7-210ENST00000503827 C9orf129Q5T035 196 aaKnown RBP9.16□□□□□ -0.94
PDLIM7-210ENST00000503827 NDUFC2-KCTD14E9PQ53 114 aa9.15□□□□□ -0.94
PDLIM7-210ENST00000503827 VCYO14598 125 aa9.15□□□□□ -0.94
PDLIM7-210ENST00000503827 MED9Q9NWA0 146 aa9.15□□□□□ -0.94
PDLIM7-210ENST00000503827 IGHV3OR16-9A0A0B4J2B5 98 aa9.14□□□□□ -0.95
PDLIM7-210ENST00000503827 PDE6DO43924 150 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms